| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 471220 | 54 (0.620) | 3 (0.040) | 3/250 | NT | 5.1% | coding (585/1782 nt) | mdlB | putative multidrug ABC transporter ATPase |
| ? | NC_000913 | = 471245 | 61 (0.740) | coding (610/1782 nt) | mdlB | putative multidrug ABC transporter ATPase | |||||
TCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTCAGCCTCGACTGGCGAATGGCACTGGTGGCGATAATGATTTTCCCGGTGGTGCTGGTGGTAATGGTGATATACCAGCGTTACAGCACGCCGATTGTCCGTCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/471072‑471220‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgtcgtTGATATCCGCCAAATAGGCGCGCACACGACGGACAATCGGCGTGCTGTAACGCTGGTATATCACCATTACCACCAGCACCACCGGGAAAATCATTATCGCCACCAGTGCCATTCGCCAGTCGAGGCTG < NC_000913/471245‑471118 TCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTCAGCCTCGACTGGCGAATGGCACTGGTTGCGATAATGATTTTCCCGGTGGTGCTGGTGGTAATGGTGATATACCAGCGTTACAGCACGCCGATTGTCCGTCGT < 2:31787/149‑1TCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTCAGCCTCGACTGGCGAATGGCACTGGTGGCGATAATGATTTTCCCGGTGGTGCTGGTGGTAATGGTGATATACCAGCGTTACAGCACGCCGATTGTCCGTCGT > 7:195713/1‑149TCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTCAGCCTCGACTGGCGAATGGCACTGGTGGCGATAATGATTTTCCCGGTGGTGCTGGTGGTAATGGTGATATACCAGCGTTACAGCACGCCGATTGTCCGTCGT < 8:933/149‑1 TGGTGGCTATGGTCCGCATCGACTGGCGAATGGCAAGGGTTGCGATAATGCTTTTCCAGGTGGTGGTGGTGGTAATGGTGATATACCAGCGTTACAGCACGCCGATTGTCCGTCGTTGATATCCGCCAAATAGGCGCGCACACGACGGA < 5:254538/149‑1 TCAGCCTCGACTGGCGAATGGCACTGGTGGCGATAATGATTTTCCCGGTGGTGCTGGTGGTAATGGTGATATACCAGCGTTACAGCACGCCGATTGTCCGTCGTTGATATCCGCCAAATAGGCGCGCACACGACGG < 3:133139/136‑1 TCAGCCTCGACTGGCGAATGGCACTGGTGGCGATAATGATTTTCCCGGTGGTGCTGGTGGTAATGGTGATATACCAGCGTTACAGCACGCCGATTGTCCGTCGTTGATATCCGCCAAATAGGCGCGCACACGACGG > 4:133139/1‑136 TCGTTGATATCCGCCAAATAGGCGCGCACACGACGGACAATCGGCGTGCTGTAACGCCGGTATATCACCATTACCACCAGCACCACCGGGAAAATCATTATCGCCACCAGTGCCATTCGCCAGTCGAGGCTG < 7:401578/132‑1 TCGTTGATATCCGCCAAATAGGCGCGCACACGACGGACAATCGGCGTGCTGTAACGCCGGTATATCACCATTACCACCAGCACCACCGGGAAAATCATTATCGCCACCAGTGCCATTCGCCAGTCGAGGCTG > 8:401578/1‑132 TCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTCAGCCTCGACTGGCGAATGGCACTGGTGGCGATAATGATTTTCCCGGTGGTGCTGGTGGTAATGGTGATATACCAGCGTTACAGCACGCCGATTGTCCGTCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/471072‑471220‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgtcgtTGATATCCGCCAAATAGGCGCGCACACGACGGACAATCGGCGTGCTGTAACGCTGGTATATCACCATTACCACCAGCACCACCGGGAAAATCATTATCGCCACCAGTGCCATTCGCCAGTCGAGGCTG < NC_000913/471245‑471118 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |