New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3045123NA (NA)2 (0.030) 3/242 NT NA noncoding (11/28 nt) REP211 (repetitive extragenic palindromic) element; contains 1 REP sequences REP211 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 3045129 NA (NA)noncoding (17/28 nt) REP211 (repetitive extragenic palindromic) element; contains 1 REP sequences REP211 (repetitive extragenic palindromic) element; contains 1 REP sequences

CAGCAAACGCTACGGCTTTATCTATGTGAATAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCACTTAGTAGCCAGACAATGGCCTGCGCGACCTCTTCTGCCTGTCCACCACGCTGCATGGG  >  NC_000913/3044975‑3045271
                                                                                                                                                    |                                                                                                                                                    
cAGCAAACGCTACGGCTTTATCTATGTGAATAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAA                                                                                                                                                      >  4:86796‑M1/1‑149 (MQ=255)
 aGCAAACGCTACGGCTTTATCTATGTGAATAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAA                                                                                                                                                      >  7:6544‑M1/1‑148 (MQ=255)
   cAAACGCTACGGCTTTATCTATGTGAATAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATAc                                                                                                                                                   >  3:356078/1‑149 (MQ=255)
    aaaCGCTACGGCTTTATCTATGTGAATAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACt                                                                                                                                                  <  3:144878/149‑1 (MQ=255)
     aaCGCTACGGCTTTATCTATGTGAATAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACtt                                                                                                                                                 <  7:66499/149‑1 (MQ=255)
     aaCGCTACGGCTTTATCTATGTGAATAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACtt                                                                                                                                                 >  8:66499/1‑149 (MQ=255)
      aCGCTACGGCTTTATCTATGTGAATAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACttg                                                                                                                                                <  8:62212/149‑1 (MQ=255)
       cGCTACGGCTTTATCTATGTGAATAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGt                                                                                                                                               >  1:65918‑M2/1‑148 (MQ=255)
        gCTACGGCTTTATCTATGTGAATAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGtt                                                                                                                                              >  4:145062‑M2/1‑147 (MQ=255)
        gCTACGGCTTTATCTATGTGAATAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGtt                                                                                                                                              >  1:33669‑M2/1‑147 (MQ=255)
        gCTACGGCTTTATCTATGTGAATAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGtt                                                                                                                                              >  6:226758‑M2/1‑147 (MQ=255)
        gCTACGGCTTTATCTATGTGAATAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGtt                                                                                                                                              >  8:6544‑M2/1‑147 (MQ=255)
             ggCTTTATCTATGTGAATAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAACAAGTAttgcatc                                                                                                                                         >  1:6802‑M2/1‑142 (MQ=255)
               cTTTATCTATGTGAATAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGttgcatccg                                                                                                                                       >  7:13453‑M2/1‑140 (MQ=255)
                tttATCTATGTGAATAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGttgcatccgg                                                                                                                                      <  8:139209‑M2/149‑11 (MQ=255)
                 ttATCTATGTGAATAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGttgcatccggt                                                                                                                                     <  6:120738‑M2/149‑12 (MQ=255)
                  tATCTATGTGAATAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGttgcatccgg                                                                                                                                      >  5:46366‑M2/1‑137 (MQ=255)
                   aTCTATGTGAATAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGttgcatccggt                                                                                                                                     <  5:381480‑M2/147‑12 (MQ=255)
                   aTCTATGTGAATAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATAATTGTTGCATCCGGTCa                                                                                                                                   >  3:71001/1‑149 (MQ=255)
                   aTCTATGTGAATAAACATGACGACGGTACTGGAGATATGACCCGATCACGTAACAAAACCTTATACTGGTACAAAGAGGTCATTGCCAGCTACGGCGAGTAGCTTAAAGTCCATCAAGTACCGCATGCAATACTTGTTGCATCCCGTCa                                                                                                                                   >  2:100016/1‑149 (MQ=255)
                        tgtgAATAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGa                                                                                                                                 <  7:102452/146‑1 (MQ=255)
                            aaTAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTc                                                                                                                          >  7:333376/1‑149 (MQ=255)
                            aaTAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTc                                                                                                                          <  6:355357/149‑1 (MQ=255)
                            aaTAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTc                                                                                                                          >  7:200814/1‑149 (MQ=255)
                                 aCATGCCGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGCTGATTGCAAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTcccgga                                                                                                                     >  5:322735/1‑146 (MQ=255)
                                 aCATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGt                                                                                                                     >  8:332652/1‑149 (MQ=255)
                                   aTGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGttt                                                                                                                   >  5:223478/1‑149 (MQ=255)
                                       cgacgGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTAtt                                                                                                               <  4:363452/149‑1 (MQ=255)
                                       cgacgGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATAATTGTTGCATCCGGTCAGACAACTTCCCCGTTTTAtt                                                                                                               <  4:71001/149‑1 (MQ=255)
                                        gacgGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTAttt                                                                                                              >  8:259857/1‑149 (MQ=255)
                                        gacgGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTAttt                                                                                                              >  2:75359/1‑149 (MQ=255)
                                         acgGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTc                                                                                                             <  1:234690/149‑1 (MQ=255)
                                                          tCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACtt                                                                                                                                                 <  8:373057/96‑1 (MQ=255)
                                                          tCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACtt                                                                                                                                                 >  7:373057/1‑96 (MQ=255)
                                                          tCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGAt                                                                                            <  7:139209/149‑1 (MQ=255)
                                                                    gTAAGAAGAGCTTTAACTGTTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTAACGGATGCAATACTTGTTGCATCCGGTCAGACAACTTACCTGtt                                                                                                                    <  6:155485/115‑1 (MQ=255)
                                                                    gTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTccc                                                                                  <  8:200814/149‑1 (MQ=255)
                                                                    gTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCATGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTccc                                                                                  <  2:232023/149‑1 (MQ=255)
                                                                       agaagaGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGt                                                                                >  8:330495/1‑148 (MQ=255)
                                                                          agagCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATACGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTACCGGAGACg                                                                            >  2:192798/1‑149 (MQ=255)
                                                                               tttAACTGGTACAAAGAGGTGATTTCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAATACAGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTaa                                                                         >  6:242464/1‑147 (MQ=255)
                                                                                ttAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAagag                                                                      >  2:260405/1‑149 (MQ=255)
                                                                                   aCTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGCCAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCt                                                                   >  6:38781/1‑149 (MQ=255)
                                                                                        tACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTAt                                                               >  7:50775/1‑148 (MQ=255)
                                                                                         aCAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGttgcatccggt                                                                                                                                     >  6:36844‑M2/1‑66 (MQ=255)
                                                                                         aCAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGttgcatccggt                                                                                                                                     <  5:36844‑M2/77‑12 (MQ=255)
                                                                                         aCAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACACCTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCa                                                             >  6:202890/1‑149 (MQ=255)
                                                                                         aCAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCa                                                             >  1:46096/1‑149 (MQ=255)
                                                                                         aCAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCa                                                             >  1:52048/1‑149 (MQ=255)
                                                                                          cAAAGAGGTGATTGCCATCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCAc                                                            <  6:122944/149‑1 (MQ=255)
                                                                                           aaaGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGGATTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCACt                                                           >  2:308342/1‑149 (MQ=255)
                                                                                           aaaGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTCGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCACt                                                           >  1:38094/1‑149 (MQ=255)
                                                                                             agagGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCACTta                                                         <  4:341264/149‑1 (MQ=255)
                                                                                               agGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCACTtagt                                                       <  2:397364/149‑1 (MQ=255)
                                                                                                ggTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCACTtagta                                                      <  7:332652/149‑1 (MQ=255)
                                                                                                 gTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAACAAGTAttgcatccggtacttcatcgacttaaagc                                                                                                                   <  2:21934‑M2/87‑30 (MQ=255)
                                                                                                 gTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAACAAGTAttgcatccggtacttcatcgacttaaagc                                                                                                                   >  1:21934‑M2/1‑58 (MQ=255)
                                                                                                    aTTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCACTTAGTAGcc                                                   <  1:75359/148‑1 (MQ=255)
                                                                                                         cAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGtt                                                                                                                                              <  6:14552‑M2/52‑3 (MQ=255)
                                                                                                         cAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGtt                                                                                                                                              >  5:14552‑M2/1‑50 (MQ=255)
                                                                                                         cAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCACTTAGTAGCCAGACaa                                             <  5:120738/149‑1 (MQ=255)
                                                                                                           gCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCACTTAGTAGCCAGACAATg                                           <  6:223478/149‑1 (MQ=255)
                                                                                                             aaCGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCACTTAGTAGCCAGACAATGGc                                         <  3:86796/149‑1 (MQ=255)
                                                                                                                   gagaAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCACTTAGTAGCCAGACAATGGCCTgcgc                                   <  6:381480/149‑1 (MQ=255)
                                                                                                                      aaGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCACTTAGTAGCCAGACAATGGCCTGCGCGAc                                <  8:333376/149‑1 (MQ=255)
                                                                                                                        gCTTTAAGTCGATGAAGTACCGGATGCAAtacttgttgcatccggtacttcatcgacttaaagcttctcgccgttgctggcaatcac                                                                                            <  2:21934‑M1/87‑59 (MQ=255)
                                                                                                                        gCTTTAAGTCGATGAAGTACCGGATGCAAtacttgttgcatccggtacttcatcgacttaaagcttctcgccgttgctggcaatcac                                                                                            >  1:21934‑M1/1‑29 (MQ=255)
                                                                                                                            tAAGTCGATGAATTACCTGATGCAATACTTGTTGCATACGGTCAGACAACTTCCCTGTTTTATTTCCCGCACGCCAAATCGATATAAGTTCGCTTGACGTAAGAGGCTTTATCACTTAGTAGACAGACAATGGCCTTCGCGACCtctt                           <  6:322735/148‑1 (MQ=255)
                                                                                                                               gTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCACTTAGTAGCCAGACAATGGCCTGCGCGACCTCTTCTGc                       <  1:260405/149‑1 (MQ=255)
                                                                                                                               gTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGACAGACAACTTCCCTGTATTATTTCGCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGACGCTATATCACTTAGTAGCCACACAATGGCCTGCCCGACatcatatg                        >  4:30915/1‑143 (MQ=255)
                                                                                                                               gTCGATGAAGTACCGGATGCAATACTTGTCGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCACTTAGTAGCCAGACAATGGCCTGCGCGACCTCTTCTGc                       <  2:38094/149‑1 (MQ=255)
                                                                                                                                tCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCACTTAGTAGCCAGACAATGGCCTGCGCGACCTCTTCTGcc                      >  5:305278/1‑149 (MQ=255)
                                                                                                                                  gATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAagag                                                                      >  6:687/1‑99 (MQ=255)
                                                                                                                                  gATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAagag                                                                      <  5:687/99‑1 (MQ=255)
                                                                                                                                   aTGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCACTTAGTAGCCAGACAATGGCCTGCGCGACCtctt                           >  1:50889/1‑141 (MQ=255)
                                                                                                                                   aTGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCACTTAGTAGCCAGACAATGGCCTGCGCGACCtctt                           <  2:50889/141‑1 (MQ=255)
                                                                                                                                   aTGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCACTTAGTAGCCAGACAATGGCCTGCGCGACCTCTTCTGCCTGt                   >  8:85791/1‑149 (MQ=255)
                                                                                                                                        tgaCCGGATGCAACAAGTATTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCACTTAGTAGCCAGACAATGGCCTGCGCGACCTCTTCTGCCTGTccacc              >  4:77495/3‑149 (MQ=255)
                                                                                                                                        gTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCACTTAGTAGCCAGACAATGGCCTGCGCGACCTCTTCTGCCTGTccacc              <  4:356078/149‑1 (MQ=255)
                                                                                                                                          aCCGTATGCAATACTTGTTGCAGCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCACTTAGTAGCCAGACAATGGCCTGCGCGACCTCTTCTGCCTGTccacca             <  5:228759/148‑1 (MQ=255)
                                                                                                                                          aCCGGATGCAAcaagtattgcatccggtacttcatcgacttaaagcttctcgccgttgctggcaatcacctctttgtaccagttaaagctcttcttacgtgaacgcgacatatcgccagtaccgtcgtcatgtttattcacatagataa            <  6:120738‑M1/149‑139 (MQ=255)
                                                                                                                                          aCCGGATGCAAcaagtattgcatccggtacttcatcgacttaaagcttctcgccgttgctggcaatcacctctttgtaccagttaaagctcttcttacgtgaacgcgacatatcgccagtaccgtcgtcatgtttattcacatagat              <  5:381480‑M1/147‑137 (MQ=255)
                                                                                                                                          aCCGGATGCAAcaagtattgcatccggtacttcatcgacttaaagcttctcgccgttgctggcaatcacctctttgt                                                                                    >  6:36844‑M1/1‑11 (MQ=255)
                                                                                                                                          aCCGGATGCAAcaagtattgcatccggtacttcatcgacttaaagcttctcgccgttgctggcaatcacctctttgt                                                                                    <  5:36844‑M1/77‑67 (MQ=255)
                                                                                                                                           ccGGATGCAAcaagtattgcatccggtacttcatcgacttaaagcttctcgccgttgctggcaatcacctctttgtaccagttaaagctcttcttacgtgaacgcgacatatcgccagtaccgtcgtcatgtttattcacatagataaa           <  8:139209‑M1/149‑140 (MQ=255)
                                                                                                                                           ccGGATGCAAcaagtattgcatccggtacttcatcgacttaaagcttctcgccgttgctggcaatcacctctttgtaccagttaaagctcttcttacgtgaacgcgacatatcgccagtaccgtcgtcatgtttattcacatagata             >  5:46366‑M1/1‑10 (MQ=255)
                                                                                                                                            cGGATGCAAcaagtattgcatccggtacttcatcgacttaaagcttctcgccgttgctggcaatcacctctttgtaccagttaaagctcttcttacgtgaacgcgacatatcgccagtaccgtcgtcatgtttattcacatagataaag          >  7:13453‑M1/1‑9 (MQ=255)
                                                                                                                                              gATGCAAtacttgttgcatccggtacttcatcgacttaaagcttctcgccgttgctggcaatcacctctttgtaccagttaaagctcttcttacgtgaacgcgacatatcgccagtaccgtcgtcatgtttattcacatagataaagcc        >  1:6802‑M1/1‑7 (MQ=255)
                                                                                                                                               aTGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAACTCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCACTTAGTAGCCAGACAATGGCCTGCGCGACCTCTTCTGCCTGTCCACCACGCTGc       <  3:304652/149‑1 (MQ=255)
                                                                                                                                                 gCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCACTTAGTAGCCAGACAATGGCCTGCGCGCCCTCTTCTGCCTGTCCACCACGCTGCAt     >  2:217914/1‑149 (MQ=255)
                                                                                                                                                   aacaagtattgcatccggtacttcatcgacttaaagcttctcgccgttgctggcaatcacctctttgtaccagttaaagctcttcttacgtgaacgcgacatatcgccagtaccgtcgtcatgtttattcacatagataaagccgtagc   >  1:33669‑M1/1‑2 (MQ=255)
                                                                                                                                                   aacaagtattgcatccggtacttcatcgacttaaagcttctcgccgttgctggcaatcacctctttgtaccagttaaagctcttcttacgtgaacgcgacatatcgccagtaccgtcgtcatgtttattcacatagataaagccgtagc   >  8:6544‑M1/1‑2 (MQ=255)
                                                                                                                                                   aacaagtattgcatccggtacttcatcgacttaaagcttctcgccgttgctggcaatcacctctttgtaccagttaaagctcttcttacgtgaacgcgacatatcgccagtaccgtcgtcatgtttattcacatagataaagccgtagc   >  4:145062‑M1/1‑2 (MQ=255)
                                                                                                                                                   aacaagtattgcatccggtacttcatcgacttaaagcttctcgccgttgctggcaatcacctctttgtaccagttaaagctcttcttacgtgaacgcgacatatcgccagtaccgtcgtcatgtttattcacatagataaagccgtagc   >  6:226758‑M1/1‑2 (MQ=255)
                                                                                                                                                   aacaagtattgcatccggtacttcatcgacttaaagcttctcgccgttgctg                                                                                                    >  5:14552‑M1/1‑2 (MQ=255)
                                                                                                                                                   aacaagtattgcatccggtacttcatcgacttaaagcttctcgccgttgctg                                                                                                    <  6:14552‑M1/52‑51 (MQ=255)
                                                                                                                                                   aaTACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCACTTAGTAGCCAGACAATGGCCTGCGCGACCTCTTCTGCCTGTCCACCACGCTGCATgg   >  4:57551/1‑149 (MQ=255)
                                                                                                                                                    acaagtattgcatccggtacttcatcgacttaaagcttctcgccgttgctggcaatcacctctttgtaccagttaaagctcttcttacgtgaacgcgacatatcgccagtaccgtcgtcatgtttattcacatagataaagccgtagcg  >  1:65918‑M1/1‑1 (MQ=255)
                                                                                                                                                    aTACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCACTTAGTAGCCAGACTATGGCCTGCGCGACCTCTTGTGCCTGTCCTCCACGCAGCATggg  >  7:365678/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CAGCAAACGCTACGGCTTTATCTATGTGAATAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAAGTCGATGAAGTACCGGATGCAATACTTGTTGCATCCGGTCAGACAACTTCCCTGTTTTATTTCCCGCCCGCCAAATCGATAAAACTTCCCGTGACGTAAGAGGCTTTATCACTTAGTAGCCAGACAATGGCCTGCGCGACCTCTTCTGCCTGTCCACCACGCTGCATGGG  >  NC_000913/3044975‑3045271

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.