New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 2125439 = | 52 (0.600) | 3 (0.040) | 3/260 | NT | 5.3% | coding (308/1224 nt) | wcaI | putative glycosyl transferase |
? | NC_000913 | 2125444 = | 55 (0.640) | coding (303/1224 nt) | wcaI | putative glycosyl transferase |
CCAGCCCCAGCATGGCGTCCACTTCGTAATCCTGAATATGCAGCACGGTACGCGCACCAGAGAGTTTCGCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCTGTTTTGGCACATACAGCGGGCAGCGCCACACCGTGGCGGCCCCCTCTTCTCGTTTGTAGCGCCAGGC > NC_000913/2125302‑2125584 | ccagccccagcATGGCGTCCACTTCGTAATCCTGAATATGCAGCACGGTACGCGCACCAGAGAGTTTCGCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTgcgc > 8:65536/1‑148 (MQ=255) cagccccagcATGGCGTCCACTTCGTAATCCTGAATATGCAGCACGGTACGCGCACCAGAGAGTTTCGCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCa < 8:259986/149‑1 (MQ=255) ccccagcATGGCGTCCACTTCGTAATCCTGAATATGCAGCACGGTACGCGCACCAGAGAGTTTCGCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCa < 7:141797/149‑1 (MQ=255) aTGGCGTCCACTTCGTAATCCTGAATATGCAGCACGGTACGCGCACCAGAGAGTTTCGCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGgaaa < 3:325639/149‑1 (MQ=255) cgagaagagggggccgccacggtgtggcgctgcccgctgtatgtgccaaaacagccgagcaccctgaaacgcctgttgcatctgggcagttttgccgtcagcagtttctttccggcttccagcgacgTTGCGCCATCAGCGgaaagaaa < 1:88034‑M2/22‑1 (MQ=255) ttCGTAATCCTGAATATGCAGCACGGTACGCGCACCAGAGAGTTTCGCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGa > 2:41119/1‑149 (MQ=255) tAATCCTGAATATGCAGCACGGTACGCGCACCAGAGAGTTTCGCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACgg > 7:134238/1‑148 (MQ=255) aaTCCTGAATATGCAGCACGGTACGCGCACCAGAGAGTTTCGCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGc > 6:12347/1‑148 (MQ=255) aaTATGCAGCACGGTACGCGCACCAGAGAGTTTCGCCAGCAGTCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGc < 3:65580/149‑1 (MQ=255) tatGCAGCACGGTACGCGCACCAGAGAGTTTCGCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGcc > 4:272305/1‑148 (MQ=255) tGCAGCACGGTACGCGCACCAGAGAGTTTCGCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCa < 3:141485/148‑1 (MQ=255) cagcaCGGTACGCGCACCAGAGAGTTTCGCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGa < 8:134238/148‑1 (MQ=255) agcaCGGTACGCGCACCAGAGAGTTTCGCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAActgct < 3:37973/128‑1 (MQ=255) agcaCGGTACGCGCACCAGAGAGTTTCGCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAActgct > 4:37973/1‑128 (MQ=255) agcaCGGTACGCGCACCAGAGAGTTTCGCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATg > 2:238277/1‑149 (MQ=255) gcaCGGTACGCGCACCAGAGAGTTTCGCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGc < 5:12347/149‑1 (MQ=255) cgcgCACCAGAGAGTTTCGCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGccc < 3:367039/135‑1 (MQ=255) cgcgCACCAGAGAGTTTCGCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGccc > 4:367039/1‑135 (MQ=255) gcgcACCAGAGAGTTTCGCCAGCAGTCGCATTACAGTCTCGCAAAACATCGTTGGCACCACTCCTATAATGCGATCCGGCTTCCTGGGTCGTTTCGCCATTAGCTGAAATAAACTGCTGACGTCAATACTGCCCAGAt < 2:321015/138‑1 (MQ=255) gcgcACCAGAGAGTTTCGCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCCCCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGAt > 1:321015/1‑138 (MQ=255) gcgcACCAGAGAGTTTCGCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAATCTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGt > 5:68077/1‑149 (MQ=255) aCCAGAGAGTTTCGCCAGCAGGCGCATTCACGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCATCAGGCGttt > 3:46118/1‑147 (MQ=255) caaaacagccgagcaccctgaaacgcctgttgcatctgggcagttttgccgtcagcagtttctttccgctgatggcgcaaCGTCGTTGCGCCATCAGCGGAAAGAAActgc < 1:372718‑M1/31‑1 (MQ=255) caaaacagccgagcaccctgaaacgcctgttgcatctgggcagttttgccgtcagcagtttctttccgctgatggcgcaaCGTCGTTGCGCCATCAGCGGAAAGAAActgc > 2:372718‑M1/81‑111 (MQ=255) cAGAGAGTTTCGCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAgg < 4:162102/149‑1 (MQ=255) cAGAGAGTTTCGCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAgg < 1:240957/149‑1 (MQ=255) gagagTTTCGCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGt > 5:66548/1‑149 (MQ=255) gTTTCGCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTc > 8:52987/1‑149 (MQ=255) tttCGCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCg > 4:309743/1‑149 (MQ=255) tCGCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGACTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCgg < 3:181813/148‑1 (MQ=255) gCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCt < 3:272305/148‑1 (MQ=255) ccAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCTGt > 2:36698/1‑149 (MQ=255) cagcagGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAAc < 8:310586/124‑1 (MQ=255) gcgcATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGcc > 6:346900/1‑108 (MQ=255) gcgcATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGcc < 5:346900/108‑1 (MQ=255) gcAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCTGTTTTGGCACATACAGCGGGCAgc > 1:262229/1‑149 (MQ=255) aaaaCAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAACACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCTGTTTTGGCACATACAGCGGGCAgcgc > 3:339840/1‑149 (MQ=255) aaaaCAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGCTGCCACAGGCGTTTCAGGGTGCTCGGCTGTTTTGGCACATACAGCGGGCAgcgc > 4:253267/1‑149 (MQ=255) aaaaCAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGc > 8:394127/1‑122 (MQ=255) aaaaCAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGc < 7:394127/122‑1 (MQ=255) aaaaCAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCTGTTTTGGCACATACAGCGGGCAgcgc > 1:204908/1‑149 (MQ=255) ttGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCTGTTTTGGCACATACAGCGGGCAGCGCCACACCGTg < 1:41119/149‑1 (MQ=255) gCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCTGTTTTGGCACATACAGCg > 8:323597/1‑129 (MQ=255) gCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCTGTTTTGGCACATACAGCg < 7:323597/129‑1 (MQ=255) ccacGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCTGTTTTGGCACATACAGCGGGCAGCGCCACACCGTGGCGGcc < 2:262229/149‑1 (MQ=255) ccacGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGGTTCAGGGTGCTCGGCTGTTTTGGCACATACAGCGGGCAGCGCCACGGTGTggcgctg < 1:238277/149‑4 (MQ=255) cacGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCTGTTTTGGCACATACAGCGGGCAGCGCCACACCGTGGCGGccc > 5:172111/1‑149 (MQ=255) gcagtttctttccgctgatggcgcaacgacgTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCTGTTTTg > 2:372718‑M2/32‑111 (MQ=255) gcagtttctttccgctgatggcgcaacgacgTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCTGTTTTg < 1:372718‑M2/80‑1 (MQ=255) gCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCTGTTTTGGCACATACAGCGGGCAGCGCCACACCGTGGCGGCCCCct > 3:259647/1‑149 (MQ=255) tttctttccgctgatggcgcaaCGTCGCTG‑GA‑AGC‑‑CGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCTGTTTTGGCACATACAGCGGGCAGCGCCACACCGTGGCGGCCCCCTCTTCTCg < 1:88034‑M1/127‑1 (MQ=255) aataatGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGCCGGCAAAACGGCCCAGATGCAACAGGCGGTTCAGGGTGCTCGGCTGTTTTGGCACATACAGCGGGCAGCGCCCCACCGTGGCGGCCCCctctg > 1:98755/1‑148 (MQ=255) aataatGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCTGTTTTGGCACATACAGCGGGCAGCGCCACACCGTGGCGGCCCCCtctt > 3:37072/1‑149 (MQ=255) cGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCTGTTTTGGCACATACAGCGGGCAGCGCCACACCGTGGCGGCCCCCTCTTCTCGttt < 5:353926/149‑1 (MQ=255) aTCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCTGTTTTGGCACATACAGCGGGCAGCGCCACACCGTGGCGGCCCCCTCTTCTCGTTTg > 5:70209/1‑148 (MQ=255) tCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCTGTTTTGGCACATACAGCGGGCAGCGCCACACCGTGGCGGTCCCCTCTTCTCGTTTGTa < 6:68077/149‑1 (MQ=255) tCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCTGTTTTGGCACATACAGCGGGCAGCGCCACACCGTGGCGGCCCCCTCTTCTCGTTTg > 4:324884/1‑147 (MQ=255) ttCCAGCGACGTTGCGCCATCAGCGGAAAGAAACAGCTGACGGCAAAACGGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCTGTTTTGGCACATACAGCGGGCAGCGCCACACCGTGGCGGCCCCCTCTTCTCGtt > 3:273263/1‑139 (MQ=255) ccAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCTGTTTTGGCACATACAGCGGGCAGCGCCACACCGTGGCGGCCCCCTCTTCTCGTTTGTAGCGCCAg < 3:324884/148‑1 (MQ=255) ccAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCTGTTTTGGCACATACAGCGGGCAGCGCCACACCGTGGCGGCCCCCTCTTCTCGGTTGTAGCGCCAgg > 7:176097/1‑149 (MQ=255) cAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCTGTTTTGGCACATACAGCGGGCAGCGCCACACCGTGGCGGCCCCCTCTTCTCGTTTGTAGCGCCAGGc > 5:293830/1‑149 (MQ=255) GACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCTGTTTTGGCACATACAGCGGGCAGCGCCACACCGTGGCGGCCCCCTCTTCTCGTTTGTAGCGcc < 7:389380‑M1/141‑1 (MQ=255) GACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCTGTTTTGGCACATACAGCGGGCAGCGCCACACCGTGGCGGCCCCCTCTTCTCGTTTGTAGCGcc > 8:389380‑M1/1‑141 (MQ=255) | CCAGCCCCAGCATGGCGTCCACTTCGTAATCCTGAATATGCAGCACGGTACGCGCACCAGAGAGTTTCGCCAGCAGGCGCATTCCCGGCGCGCAAAACAGCGTTGGCACCACGCCAATAATGCGATCCGGCTTCCAGCGACGTTGCGCCATCAGCGGAAAGAAACTGCTGACGGCAAAACTGCCCAGATGCAACAGGCGTTTCAGGGTGCTCGGCTGTTTTGGCACATACAGCGGGCAGCGCCACACCGTGGCGGCCCCCTCTTCTCGTTTGTAGCGCCAGGC > NC_000913/2125302‑2125584 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |