| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2768010 | 28 (0.830) | 6 (0.190) | 6/248 | 2.6 | 16.8% | coding (301/864 nt) | yfjP | CP4‑57 prophage; 50S ribosome‑binding GTPase family protein |
| ? | NC_000913 | = 2768033 | 33 (1.030) | coding (324/864 nt) | yfjP | CP4‑57 prophage; 50S ribosome‑binding GTPase family protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CTTTGCAATGCCCTGTTTGCCGGTGAAGTATCGCCGGTCAGCGATGTAGCGGCCTGTACACGTGATCCTTTACGCTTTCGCCTGCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCTGTGGCTGATTAAGGCTGATGATCGGGCACTGGCGACTGATGAGCATTTTTACCGTCAGGTGATTGGCGAAGCATACCGGCATAAGATG > NC_000913/2767863‑2768153 | cTTTGCAATGCCCTGTTTGCCGGTGAAGTATCGCCGGTCAGCGATGTAGCGGCCTGTACACGTGATCCTTTACGCTTTCGCCTGCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGa < 7:15057/149‑1 (MQ=255) tttGCCGGTGAAGTATCGCCGGTCAGCGATGTAGCGGCCTGTACACGTGATCCTTTACGCTTTCGCCTGCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGATACCGAGTAtgctgc > 1:168014/1‑149 (MQ=255) tATCGCCGGTCAGCGATGTAGCGGCCTGTACACGTGATCCTTTACGCTTTCGCCTGCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACcgcgaa > 7:41038‑M2/1‑143 (MQ=255) tATCGCCGGTCAGCGATGTAGCGGCCTGTACACGTGATCCTTTACGCTTTCGCCTGCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACcgcgaa < 7:11437‑M2/149‑7 (MQ=255) tATCGCCGGTCAGCGATGTAGCGGCCTGTACACGTGATCCTTTACGCTTTCGCCTGCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACc > 7:21583‑M2/1‑143 (MQ=255) tATCGCCGGTCAGCGATGTAGCGGCCTGTACACGTGATCCTTTACGCTTTCGCCTGCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACc < 8:21583‑M2/144‑2 (MQ=255) aGCGATGTAGCGGCCTGTACACGTGATCCTTTACGCTTTCGCCTGCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCg < 2:168014/149‑1 (MQ=255) tAGCGGCCTGTACACGTGATCCTTTACGCTTTCGCCTGCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGAc < 8:11437/149‑1 (MQ=255) cGTGATCCTTTACGCGTTCGCCTGCAGATTGGAGAACACTTTATGACCTTCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGGGCGCGATACCGAGTATGCGGCGCGGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCTGTGGCt < 7:123816/149‑1 (MQ=25) tttACGCTTTCGCCTGCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGgtacagcgcagcatactcggtatcgcgaa > 1:105822‑M1/1‑80 (MQ=255) tttACGCTTTCGCCTGCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGgtacagcgcagcatactcggtatcgcgaa < 2:105822‑M1/109‑30 (MQ=255) ttACGCTTTCGCCTGCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCTGTGGCTGATTAAGGc > 3:104363/1‑149 (MQ=255) tttCGCCTGCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCTGTGGCTGATTAAGGCtgatga > 5:126312/1‑149 (MQ=255) gCCTGCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCTGTGGCTGATTAAGGCTGATGATCgg < 4:104363/149‑1 (MQ=255) gCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGgtacagcgcagcatactcggtatcgcgaacgcc < 5:11510‑M1/98‑34 (MQ=255) gCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGgtacagcgcagcatactcggtatcgcgaacgcc > 6:11510‑M1/1‑65 (MQ=255) gATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCTGTGGCTGATTAAGGCTGATGATCGGGCACTgg > 4:61750/1‑149 (MQ=255) aTTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGgtacagcgcagcatactcggtatcgcgaacgcca > 7:52085‑M1/1‑61 (MQ=255) aTTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGgtacagcgcagcatactcggtatcgcgaacgcca < 8:52085‑M1/95‑35 (MQ=255) gagaACACTTTATGACGATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCTGTGGCTGa < 8:106939/120‑1 (MQ=255) gagaACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCTGTGGCTGa > 7:106939/1‑120 (MQ=255) aaCACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCTGTGGCTGATTAAGGCTGATGATCGGGCACTGGCGACtgat < 1:113107/149‑1 (MQ=255) cacTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCTGTGGCTGATTAAGGCTGATGATCGGGCACTGGCGACtgat > 3:22456/1‑147 (MQ=255) cATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCtgt > 7:42490/1‑98 (MQ=255) cATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCtgt < 8:42490/98‑1 (MQ=255) cATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCTGTGGCTGATTAAGGCTGATGATCGGGCACTGGCGACTGATGAGCATTTTTAcc < 6:126312/149‑1 (MQ=255) tCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCTGTGGCTGATTAAGGCTGATGATCGGGCACTGGCGACtga < 6:157600/133‑1 (MQ=255) tCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCTGTGGCTGATTAAGGCTGATGATCGGGCACTGGCGACtga > 5:157600/1‑133 (MQ=255) gCGTGGGCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCTGTGGCTGATTAAGGCTGATGATCGGGCACTGGCGACTGATGAGCATTTTTACCGTCAGGTGATTGGCGaa < 5:2712/149‑1 (MQ=255) gCGTGGGCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCTGTGGCTGATTAAGGCTGATGATCGGGCACTGGCGACTGATGAGCATTTTTACCGTCAGGTGATTGGCGaa < 3:61750/149‑1 (MQ=255) gCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCTGTGGCTGATTaa > 1:179772/1‑85 (MQ=255) gCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCTGTGGCTGATTaa < 2:179772/85‑1 (MQ=255) gCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCTGTGGCTGATTAAGGCTGATGATCGGGCACTGGCGACTGATGAGCATTTTTACCGTCAGGTGATTGGCGAAGCATAc > 2:123050/1‑149 (MQ=255) cGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCTGTGGCTGATTAAGGCTGATGATCGGGCACTGGCGACTGATGAGCATTTTTa > 1:92309/1‑123 (MQ=255) cGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCTGTGGCTGATTAAGGCTGATGATCGGGCACTGGCGACTGATGAGCATTTTTa < 2:92309/123‑1 (MQ=255) cGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCTGTGGCTGATTAAGGCTGATGATCGGGCACTGGCGACTGATGAGCATTTTTACCGTCAGGTGATTGGCGaa > 5:28400/1‑142 (MQ=255) cGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCTGTGGCTGATTAAGGCTGATGATCGGGCACTGGCGACTGATGAGCATTTTTACCGTCAGGTGATTGGCGaa < 6:28400/142‑1 (MQ=255) tGGCGTTCGCGATACCGAGTATGCTGCGCTGTACcgcgaacgccactttcgcccacgccgggcagatccacgatggtcataaagtgttctccaat > 7:52085‑M2/1‑34 (MQ=255) tGGCGTTCGCGATACCGAGTATGCTGCGCTGTACcgcgaacgccactttcgcccacgccgggcagatccacgatggtcataaagtgttctccaat < 8:52085‑M2/95‑62 (MQ=255) ggCGTTCGCGATACCGAGTATGCTGCGCTGTACcgcgaacgccactttcgcccacgccgggcagatccacgatggtcataaagtgttctccaatctgc > 6:11510‑M2/1‑33 (MQ=255) ggCGTTCGCGATACCGAGTATGCTGCGCTGTACcgcgaacgccactttcgcccacgccgggcagatccacgatggtcataaagtgttctccaatctgc < 5:11510‑M2/98‑66 (MQ=255) gTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCTGTGGCTGATTAAGGCTGATGATCGGGCACTGGCGACTGATGAGCATTTTTACCGTCAGGTGATTGGCGAAGCATACCGGCATAAGAt > 4:36200/1‑149 (MQ=255) ttCGCGgtacagcgcagcatactcggtatcgcgaacgccactttcgcccacgccgggcagatccacgatggtcataaagtgttctccaatctgcaggcgaaagcgtaaaggatcacgtgtacaggccgctacatcgctgaccggcgata > 7:41038‑M1/1‑6 (MQ=255) ttCGCGgtacagcgcagcatactcggtatcgcgaacgccactttcgcccacgccgggcagatccacgatggtcataaagtgttctccaatctgcaggcgaaagcgtaaaggatcacgtgtacaggccgctacatcgctgaccggcgata < 7:11437‑M1/149‑144 (MQ=255) ttCGCGATACCGAGTATGCTGCGCTGTACcgcgaacgccactttcgcccacgccgggcagatccacgatggtcataaagtgttctccaatctgcaggcgaaagcgtaaa < 2:105822‑M2/109‑81 (MQ=255) ttCGCGATACCGAGTATGCTGCGCTGTACcgcgaacgccactttcgcccacgccgggcagatccacgatggtcataaagtgttctccaatctgcaggcgaaagcgtaaa > 1:105822‑M2/1‑29 (MQ=255) ggtacagcgcagcatactcggtatcgcgaacgccactttcgcccacgccgggcagatccacgatggtcataaagtgttctccaatctgcaggcgaaagcgtaaaggatcacgtgtacaggccgctacatcgctgaccggcgata > 7:21583‑M1/1‑1 (MQ=255) ggtacagcgcagcatactcggtatcgcgaacgccactttcgcccacgccgggcagatccacgatggtcataaagtgttctccaatctgcaggcgaaagcgtaaaggatcacgtgtacaggccgctacatcgctgaccggcgata < 8:21583‑M1/144‑144 (MQ=255) | CTTTGCAATGCCCTGTTTGCCGGTGAAGTATCGCCGGTCAGCGATGTAGCGGCCTGTACACGTGATCCTTTACGCTTTCGCCTGCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCTGTGGCTGATTAAGGCTGATGATCGGGCACTGGCGACTGATGAGCATTTTTACCGTCAGGTGATTGGCGAAGCATACCGGCATAAGATG > NC_000913/2767863‑2768153 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |