| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3922214 = | 121 (1.560) | 4 (0.050) | 4/256 | NT | 3.4% | coding (227/381 nt) | atpI | ATP synthase, membrane‑bound accessory factor |
| ? | NC_000913 | 3922243 = | 110 (1.470) | coding (198/381 nt) | atpI | ATP synthase, membrane‑bound accessory factor | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGGATTGCTGTTCAGCCTCAAAGACCCCTTCTGGGGCGTCTCTGCAATAAGCGGGGGCCTGGCAGTCTTTCTGCCTAACGTTTTGTTTATGATATTTGCCTGGCGTCACCAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3922366‑3922214‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCTGAACAGCAATCCACTTGCTATCACCACCAGTAACTG > NC_000913/3922243‑3922389 TGGATTGCTGTTCAGCCTCAAAGACCCCTTCTGGGGCGTCTCTGCAATAAGCGGGGGCCTGGCAGTCTTTCTGCCTAACGTTTTGTTTATGATATTTGCCTGGCGTCACCAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACAT > 4:106167/1‑149 GATTGCTGTTCAGCCTCAAAGACCCCTTCTGGGGCGTCTCTGCAATAAGCGGGGGCCTGGCAGTCTTTCTGCCTAACGTTTTGTTTATGATATTTGCCTGGCGTCACCAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTC < 6:15435/149‑1 GATTGCTGTTCAGCCTCAAAGACCCCTTCTGGGGCGTCTCTGCAATAAGCGGGGGCCTGGCAGTCTTTCTGCCTAACGTTTTGTTTATGATATTTGCCTGGCGTCACCAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTC < 7:319611/149‑1 GATTGCTGTTCAGCCTCAAAGACCCCTTCTGGGGCGTCTCTGCAATAAGCGGGGGCCTGGCAGTCTTTCTGCCTAACGTTTTGTTTATGATATTTGCCTGGCGGCACCAGGCGCATACACCAGCCAAAGGCCGGGTGGCCTGGACATTC < 6:175407/149‑1 TGCTGTTCAGCCTCAAAGCCCCCTTCTGGGGCGTCGCTGCAATAAGCGGGGGCCGGGCAGGCTTTCTGGCTAACGTTTTGTTTATTATATTTGCCTGGCGTCACCAGGCGCATACAGCAGCGAAAGGCCGGGTGGCCTGGACATTCGC < 8:109301/148‑1 GCTGTTCAGCCTCAAAGACCCCTTCTGGGGCGTCTCTGCAATAAGCGGGGGCCTGGCTGTCTTTCTGCCTAACGTTTTGTTTATGATATTTGCCTGGCGTCACCAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTtgga < 4:46982/148‑5 ACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGA > 8:30156/1‑117 ACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGAAGAAAGACTGCCAGGCCCCCGCTTATTGCAGA < 7:30156/117‑1 CAGCGAAAGGCCGGGTGGCCTGGACATTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCA > 5:137148/1‑96 CAGCGAAAGGCCGGGTGGCCTGGACATTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCA < 6:137148/96‑1 CTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCTGAACAGCAATCCACTTGCTATCACCACCAGTAACTG > 8:114885/1‑148 TGGATTGCTGTTCAGCCTCAAAGACCCCTTCTGGGGCGTCTCTGCAATAAGCGGGGGCCTGGCAGTCTTTCTGCCTAACGTTTTGTTTATGATATTTGCCTGGCGTCACCAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3922366‑3922214‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCTGAACAGCAATCCACTTGCTATCACCACCAGTAACTG > NC_000913/3922243‑3922389 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |