New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3922214 =121 (1.560)4 (0.050) 4/256 NT 3.4% coding (227/381 nt) atpI ATP synthase, membrane‑bound accessory factor
?NC_000913 3922243 = 110 (1.470)coding (198/381 nt) atpI ATP synthase, membrane‑bound accessory factor
Rejected: Frequency below/above cutoff threshold.

Only 100 of 143 total aligned reads displayed.

TTTGTTGTTAATTACAGCCGGTGCCAGTATCTGAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCTGAACAGCA  >  NC_000913/3922066‑3922361
                                                                                                                                                    |                                                                                                                                                   
tttGTTGTTAATTACAGCCGGTGCCAGTATCTGAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATg                                                                                                                                                     >  5:151236/1‑149 (MQ=255)
 cagttactggtggtgatagcaagtggattgctgttcagcctcaaagaccccttctggggcgtctctgcaataagcgggggcctggcagtctttctgcctaacgttttgtttatgatatttgcctggcgtcaccaggcgcatacaccag                                                                                                                                                     >  8:114885‑M1/148‑148 (MQ=255)
  tgttgtTAATTACAGCCGGTGCCAGTATCTGAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATg                                                                                                                                                     <  6:137134/147‑1 (MQ=255)
  tgttgtTAATTACAGCCGGTGCCAGTATCTGAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGc                                                                                                                                                    <  4:149285/148‑1 (MQ=255)
  tgttgtTAATTACAGCCGGTGCCAGTATCTGAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGc                                                                                                                                                    >  5:291088/1‑148 (MQ=255)
    ttgttAATTACAGCCGGTGCCAGTATCTGAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGaa                                                                                                                                                 >  3:305661/1‑149 (MQ=255)
    ttgttAATTACAGCCGGTGCCAGTATCTGAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGaa                                                                                                                                                 <  8:147597/149‑1 (MQ=255)
    ttggtAATTACCGCCGGTGCCATGATCTTAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGaa                                                                                                                                                 <  6:2934/149‑1 (MQ=255)
       ttAATTACAGCCGGTGCCAGTATCTGAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAACCCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGt                                                                                                                                              >  3:289246/1‑149 (MQ=255)
       ttAATTACAGCCGGTGCCAGTATCTGAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGt                                                                                                                                              >  3:212890/1‑149 (MQ=255)
          aTTACAGCCGGTGCCAGTATCTGAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTc                                                                                                                                             >  1:245920/1‑147 (MQ=255)
           ttACAGCCGGTGCCAGTATCTGAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGc                                                                                                                                                    >  2:240422/1‑139 (MQ=255)
           ttACAGCCGGTGCCAGTATCTGAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGa                                                                                                                                                  >  7:58950/1‑141 (MQ=255)
           ttACAGCCGGTGCCAGTATCTGAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGa                                                                                                                                                  <  8:58950/141‑1 (MQ=255)
             aCAGCCGGTTCCAGTATCTGAACCACCAGCACCAAAACCCACGTTACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAgg                                                                                                                                         <  2:272854/148‑1 (MQ=255)
               aGCCGGTGCAAGTATCTGAACCACAAGCACCAAAAAACACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACAACCATTACCACCACCATCGCCAGAACTTTGAAAGCTACGCCAAATGCGAATGTCCAGGCCa                                                                                                                                      >  4:107318/1‑149 (MQ=255)
                       ccAGTATCTGAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCt                                                                                                                              >  4:270739/1‑149 (MQ=255)
                          gTATCTGAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTc                                                                                                                           >  8:256324/1‑149 (MQ=255)
                             tCTGAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCCACGCCACCACCAGTAACACCCCCATCGCCAGACCTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCt                                                                                                                        >  7:313306/1‑149 (MQ=255)
                             tCTGAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCt                                                                                                                        >  2:276900/1‑149 (MQ=255)
                               tGAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCGCCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTgg                                                                                                                      >  3:134224/1‑149 (MQ=255)
                               tGAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTgg                                                                                                                      >  1:96485/1‑149 (MQ=255)
                                gAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCTTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTCgt                                                                                                                     >  8:317312/1‑149 (MQ=255)
                                gAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAACCCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGgt                                                                                                                     >  1:260055/1‑149 (MQ=255)
                                gAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGgt                                                                                                                     >  7:280720/1‑149 (MQ=255)
                                 aaCCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGgt                                                                                                                     <  1:175877/148‑1 (MQ=255)
                                 aaCCACCAGCACCAAAACCCACGTAACGATCAGCCGCAAGAATACCGCCTTTAAAACCGGCAACGCCACCACCAGTAACCCCTACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCACGCCACCCGGCCTTTCGCTGgt                                                                                                                     <  2:248118/148‑1 (MQ=255)
                                   ccaccaGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTa                                                                                                                  >  8:329679/1‑149 (MQ=255)
                                   caacccccACCAAAACCCACGTAACGCACAGCGGCAAGAATACCGACTTAAAAACCGCCACCGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCCTCGCCAACTGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTa                                                                                                                  <  6:183896/142‑1 (MQ=255)
                                          cACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCt                                                                                                           <  8:280720/149‑1 (MQ=255)
                                          cACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACACCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCt                                                                                                                              >  5:82606/1‑130 (MQ=255)
                                              aaaaCCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGt                                                                                                        >  7:235386/1‑148 (MQ=255)
                                                  cccACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGc                                                                                                   >  3:109477/1‑149 (MQ=255)
                                                      cGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAgg                                                                                               <  3:70042/149‑1 (MQ=255)
                                                         aaCGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTg                                                                                                                       <  2:64687/122‑1 (MQ=255)
                                                         aaCGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTg                                                                                                                       >  1:64687/1‑122 (MQ=255)
                                                          aCGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCaaa                                                                                           <  7:256324/149‑1 (MQ=255)
                                                                tctgcaataagcgggggcctggcagtctttctgcctaacgttttgtttatgatatttgcctggcgtcaccaggcgcatacaccaGCGAATGTCCAGGCCACCCGGCCTTTCGCTGgt                                                                                                                     >  8:30156‑M1/85‑117 (MQ=255)
                                                                aGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCCGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCa                                                                                      <  3:182334/148‑1 (MQ=255)
                                                                aGCGGCAAGAATACCGCCCTTAAAACCGCCAACCCCACCACCAGTAACACCACCATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCTCCCTTTCGCTGGTGTATGCGCCTTGTGACGCCAGGCAAATATCa                                                                                      <  4:9173/148‑1 (MQ=255)
                                                                 gCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTACCACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATa                                                                                    <  6:77896/149‑1 (MQ=255)
                                                                 gCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGt                                                                                                        <  3:26753/129‑1 (MQ=255)
                                                                 gCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGt                                                                                                        >  4:26753/1‑129 (MQ=255)
                                                                  cGGCAAGACTACCGCCTTTCCACCCGCCAACGCCCCCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTGCGCCACATGCGAATGTCCAGGCCACCCGGCCGTTCGCTGGTGTATGCGCCGGCTGACGCCAGGCAAATATCATaa                                                                                   <  1:228345/149‑1 (MQ=255)
                                                                    gCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAAc                                                                                 <  4:109477/149‑1 (MQ=255)
                                                                     cAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAAc                                                                                 >  2:61450/1‑148 (MQ=255)
                                                                      aaGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACaa                                                                               <  7:171692/149‑1 (MQ=255)
                                                                        gAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACaaaa                                                                             <  7:281034/149‑1 (MQ=255)
                                                                        gAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACaaaa                                                                             <  1:347165/149‑1 (MQ=255)
                                                                           tACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGt                                                                          >  3:51113/1‑149 (MQ=255)
                                                                             ccGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGt                                                                          >  1:299404/1‑147 (MQ=255)
                                                                               gCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAgg                                                                      <  4:212890/149‑1 (MQ=255)
                                                                                   ttAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAg                                                                   >  4:185079/1‑148 (MQ=255)
                                                                                   ttAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAg                                                                   >  5:201097/1‑148 (MQ=255)
                                                                                   ttAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAg                                                                   >  5:205900/1‑148 (MQ=255)
                                                                                   tggcagtctttctgcctaacgttttgtttatgatatttgcctggcgtcaccaggcgcatacaccaGCGAATGTCCAGGCCACCCGGCCTTTCGCTg                                                                                                                       <  6:137148‑M1/31‑1 (MQ=255)
                                                                                   tggcagtctttctgcctaacgttttgtttatgatatttgcctggcgtcaccaggcgcatacaccaGCGAATGTCCAGGCCACCCGGCCTTTCGCTg                                                                                                                       >  5:137148‑M1/66‑96 (MQ=255)
                                                                                      aaaCCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGaaa                                                                <  4:135209/148‑1 (MQ=255)
                                                                                       aaCCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGa                                                              <  2:318678/149‑1 (MQ=255)
                                                                                       aaCCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGa                                                              <  6:291088/149‑1 (MQ=255)
                                                                                           gCCAACGCCACCACCAGTAACACCAACATAGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAACGACTGc                                                          <  8:306953/149‑1 (MQ=255)
                                                                                             cAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTAGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCa                                                        <  6:337562/149‑1 (MQ=255)
                                                                                              aaCGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCTCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAg                                                       <  1:7689/149‑1 (MQ=255)
                                                                                               aCGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAgg                                                      >  6:166742/1‑149 (MQ=255)
                                                                                                cGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGc                                                     <  3:185079/149‑1 (MQ=255)
                                                                                                     ccaccaGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCg                                                >  7:348333/1‑149 (MQ=255)
                                                                                                      caccaGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGCCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCg                                                >  7:324410/1‑148 (MQ=255)
                                                                                                         caGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTa                                            >  1:220054/1‑149 (MQ=255)
                                                                                                              acacCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGc                                        <  4:305661/148‑1 (MQ=255)
                                                                                                               cacCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGgtg                                                                                                                    >  1:39779/1‑71 (MQ=255)
                                                                                                               cacCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGgtg                                                                                                                    <  2:39779/71‑1 (MQ=255)
                                                                                                                acCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATc                                                                                       <  1:178448/99‑1 (MQ=255)
                                                                                                                acCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATc                                                                                       >  2:178448/1‑99 (MQ=255)
                                                                                                                acCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCaga                                     <  8:238615/149‑1 (MQ=255)
                                                                                                                acCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCaga                                     <  7:317312/149‑1 (MQ=255)
                                                                                                                acCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCa                                       >  3:64605/1‑147 (MQ=255)
                                                                                                                 ccAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTg                                         <  5:107402/144‑1 (MQ=255)
                                                                                                                  cAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAATACGTTAGGCAGAAAGACTGCCCGGCCCCCGCTTATTGCAgaga                                   >  3:104265/1‑149 (MQ=255)
                                                                                                                  cAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAg                                                       <  5:237208/129‑1 (MQ=255)
                                                                                                                  cAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAg                                                       >  6:237208/1‑129 (MQ=255)
                                                                                                                  cAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAgaga                                   >  3:263096/1‑149 (MQ=255)
                                                                                                                  cAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAgaga                                   >  4:326252/1‑149 (MQ=255)
                                                                                                                         gCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGccc                              >  6:41593/1‑147 (MQ=255)
                                                                                                                          ccAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGccc                              >  3:106167/1‑146 (MQ=255)
                                                                                                                          ccAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGccc                              >  5:103023/1‑146 (MQ=255)
                                                                                                                            aGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAg                           >  6:218848/1‑147 (MQ=255)
                                                                                                                               aCTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCTGAAggg                      <  2:299404/149‑1 (MQ=255)
                                                                                                                               aCTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAggg                      <  2:245920/149‑1 (MQ=255)
                                                                                                                                 tttGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTTCa                                       >  4:198366/1‑130 (MQ=255)
                                                                                                                                   tGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGt                    <  6:84871/147‑1 (MQ=255)
                                                                                                                                   tGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGt                    >  5:84871/1‑147 (MQ=255)
                                                                                                                                   tGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGt                    <  6:201097/147‑1 (MQ=255)
                                                                                                                                    gAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCtt                 >  8:168397/1‑149 (MQ=255)
                                                                                                                                     aaaGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCttt                >  7:46843/1‑149 (MQ=255)
                                                                                                                                     aaaGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCttt                <  5:41593/149‑1 (MQ=255)
                                                                                                                                       aGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGa              <  1:198908/149‑1 (MQ=255)
                                                                                                                                             gCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCTg         <  7:168397/148‑1 (MQ=255)
                                                                                                                                              ccAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGATGGGGTCTTTGAGGCTGaa       <  8:320643/149‑1 (MQ=255)
                                                                                                                                                 aaTGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCaga                                     >  7:322571/1‑116 (MQ=255)
                                                                                                                                                    GCGAATGTCCAGGCCACCCGGCCTTTCGCTGCTGTATGCGCCTGGTGACGCCAGGCAAATATAATAAACAAAACGTTAGCCAGAAAGCCTGCCCGGCCCCCGCTTATTGCAGCGACGCCCCAGAAGGGGGCTTTGAGGCTGAACAGCa  <  8:109301‑M1/148‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
TTTGTTGTTAATTACAGCCGGTGCCAGTATCTGAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCTGAACAGCA  >  NC_000913/3922066‑3922361

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.