mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 11 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4467562 | 87 (0.960) | 4 (0.050) | 3/252 | NT | 4.2% | intergenic (+78/‑63) | mgtL/mgtA | regulatory leader peptide for mgtA/magnesium transporter |
| ? | NC_000913 | = 4467577 | 101 (1.180) | intergenic (+93/‑48) | mgtL/mgtA | regulatory leader peptide for mgtA/magnesium transporter | |||||
| * | ? | NC_000913 | = 4096016 | 89 (0.980) | 4 (0.050) | 4/254 | NT | 4.4% | coding (1433/1470 nt) | rhaB | rhamnulokinase |
| ? | NC_000913 | = 4096038 | 90 (1.040) | coding (1411/1470 nt) | rhaB | rhamnulokinase | |||||
| * | ? | NC_000913 | = 3270206 | 65 (0.720) | 1 (0.020) +51 bp |
3/164 | NT | 2.3% | intergenic (+604/+10) | yhaC/rnpB | pentapetide repeats‑related protein/RNase P, M1 RNA component |
| ? | NC_000913 | = 3270244 | 76 (0.840) | noncoding (349/377 nt) | rnpB | RNase P, M1 RNA component | |||||
| * | ? | NC_000913 | = 3239679 | 81 (0.890) | 3 (0.030) | 3/256 | NT | 3.5% | intergenic (+134/‑265) | alx/sstT | putative membrane‑bound redox modulator/sodium:serine/threonine symporter |
| ? | NC_000913 | = 3239693 | 89 (1.020) | intergenic (+148/‑251) | alx/sstT | putative membrane‑bound redox modulator/sodium:serine/threonine symporter | |||||
| * | ? | NC_000913 | = 2716029 | 100 (1.100) | 4 (0.050) | 4/242 | NT | 4.0% | intergenic (+19/+37) | eamB/grcA | cysteine and O‑acetylserine exporter/autonomous glycyl radical cofactor |
| ? | NC_000913 | = 2716033 | 103 (1.250) | intergenic (+23/+33) | eamB/grcA | cysteine and O‑acetylserine exporter/autonomous glycyl radical cofactor | |||||
| * | ? | NC_000913 | 2657585 = | 67 (0.740) | 3 (0.030) | 3/252 | NT | 4.9% | coding (1351/1851 nt) | hscA | DnaK‑like molecular chaperone specific for IscU |
| ? | NC_000913 | 2657618 = | 52 (0.610) | coding (1318/1851 nt) | hscA | DnaK‑like molecular chaperone specific for IscU | |||||
| * | ? | NC_000913 | 1909042 = | 86 (0.950) | 3 (0.030) | 3/254 | NT | 3.5% | coding (118/240 nt) | yobH | uncharacterized protein |
| ? | NC_000913 | 1909080 = | 85 (0.980) | coding (156/240 nt) | yobH | uncharacterized protein | |||||
| * | ? | NC_000913 | = 1755758 | 104 (1.150) | 4 (0.040) | 4/266 | NT | 3.7% | coding (61/1413 nt) | pykF | pyruvate kinase I |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 878646 | 79 (0.870) | 4 (0.050) | 4/246 | NT | 4.9% | intergenic (+15/‑96) | bssR/yliI | repressor of biofilm formation by indole transport regulation/soluble aldose sugar dehydrogenase |
| ? | NC_000913 | = 878651 | 81 (0.970) | intergenic (+20/‑91) | bssR/yliI | repressor of biofilm formation by indole transport regulation/soluble aldose sugar dehydrogenase | |||||
| * | ? | NC_000913 | = 535514 | 78 (0.860) | 3 (0.040) | 3/242 | NT | 4.0% | coding (1599/1782 nt) | gcl | glyoxylate carboligase |
| ? | NC_000913 | = 535539 | 73 (0.880) | coding (1624/1782 nt) | gcl | glyoxylate carboligase | |||||