| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1562837 = | 29 (0.810) | 6 (0.180) | 6/232 | 3.4 | 18.7% | coding (240/582 nt) | ddpX | D‑ala‑D‑ala dipeptidase, Zn‑dependent |
| ? | NC_000913 | 1562864 = | 25 (0.750) | coding (213/582 nt) | ddpX | D‑ala‑D‑ala dipeptidase, Zn‑dependent | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGAT > NC_000913/1562722‑1562992 | ccATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGAGCTTGTTGTggg > 1:59079/1‑143 (MQ=255)ccATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGAGCTTGTTGTggg < 2:59079/143‑1 (MQ=255) gTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATc < 3:45508/148‑1 (MQ=255) atcaCGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAAc < 6:165475/148‑1 (MQ=255) gAAGCGTCAGGTCGATCTCAGTGCCACTGCTGTTATTAGAACCGACCGTCACATAAACAACATATTGCGGGTCTGGGCAGGCTTGCCAAAAAATCGCCTGTGCTTGTTGTGTGCGATACGCATCGTAAATCACCAGTTGTAACACtta > 6:36239/1‑146 (MQ=255) tGCCACGGCTGTGATTAGAACCGACAGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGACTGTGCTTGTTGTGGGCTATACGCATCGTAAATCACCATTTGTAACCCTGACAGCTGGTCGATGCTGATACtt < 5:36239/149‑1 (MQ=255) ccACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACtttt > 2:91644/1‑149 (MQ=255) cACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTc < 1:74842/149‑1 (MQ=255) cACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTc < 1:91644/149‑1 (MQ=255) aTTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGcgcg < 6:160359/148‑1 (MQ=255) gAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAAcc < 7:27996/106‑1 (MQ=255) gAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAAcc > 8:27996/1‑106 (MQ=255) acaTCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCgg < 2:196767/133‑1 (MQ=255) acaTCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCgg > 1:196767/1‑133 (MQ=255) caTCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTtgtg > 8:117767/1‑148 (MQ=255) aacaacATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTaa > 2:24467/1‑147 (MQ=255) gCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACgcgc < 1:24467/148‑1 (MQ=255) cAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAAt < 7:117767/149‑1 (MQ=255) gCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCtt > 2:76704/1‑116 (MQ=255) gCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCtt < 1:76704/116‑1 (MQ=255) cacaACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTAcc > 5:57354/1‑149 (MQ=255) acaacaTCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCt > 6:10640/1‑149 (MQ=255) aTCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGAt < 5:10640/149‑1 (MQ=255) tCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATc < 4:62758/95‑1 (MQ=255) tCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATc > 3:62758/1‑95 (MQ=255) | CCATATCGAGGATGTTCCCGTGCTCATCACGAAGCGTCAGGTCGATCGCCGTGCCACGGCTGTGATTAGAACCGACCGTCACATCAACAACATATTGCGGGTCTGGGCAGGCTTGCCACAACATCGCCTGTGCTTGTTGTGGGCGATACGCATCGTAAATCACCAGTTGTAACCCTGACAGCTGGGCGATGCTGATACTTTTCGCCAGCGCGGTAATCGCATCCTTGTGTAACAGACAACGCGCTTGCTGATAAATAGCTTTACCTGTGAT > NC_000913/1562722‑1562992 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |