New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3800403161 (1.790)4 (0.050) 4/238 NT 2.5% coding (563/699 nt) waaY lipopolysaccharide core biosynthesis protein
?NC_000913 = 3800415 152 (1.750)coding (551/699 nt) waaY lipopolysaccharide core biosynthesis protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 181 total aligned reads displayed.

TGGGATTTTTTTTAGCGCGCTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAATTTTATTTTTTAGCG  >  NC_000913/3800256‑3800550
                                                                                                                                                   |                                                                                                                                                    
tgGGATTTTTTTTAGCGCGCTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTT                                                                                                                                                      >  2:218690‑M1/1‑148 (MQ=255)
   gATTTTTTTTAGCGCGCTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATATCGTAATGACGCTCTAAGTCAATACCATCTTTCGCTTTA‑c                                                                                                                                                  >  7:38901/1‑148 (MQ=255)
   gATTTTTTTTAGCGCGCTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑c                                                                                                                                                  >  4:90890/1‑148 (MQ=255)
      tttttttAGCGCGCTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑cgct                                                                                                                                               >  6:196654/1‑148 (MQ=255)
      tttttttAGCGCGCTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑cgct                                                                                                                                               >  7:336905/1‑148 (MQ=255)
         ttttAGCGCGCTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑cgctgcg                                                                                                                                            >  6:84762/1‑148 (MQ=255)
            tAGCGCGCTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑cgctgcgct                                                                                                                                          <  4:84964/147‑1 (MQ=255)
              gggggcttgtTTACCTTTCAAAAGGCGCATTAAATTTCTCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGa                                                                                                                                        >  6:278251‑M2/5‑146 (MQ=255)
              gcgcgcTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑cgctgcgctg                                                                                                                                         >  1:246181/1‑146 (MQ=255)
                 cgcTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCa                                                                                                                                    <  5:91111/148‑1 (MQ=255)
                   cTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACg                                                                                                                                  >  7:134444/1‑148 (MQ=255)
                      gTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCtt                                                                                                                               >  6:100804/1‑148 (MQ=255)
                         tCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTTCGCTGAAGCACGCTTTc                                                                                                                             <  2:295480/147‑1 (MQ=255)
                         tCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTcc                                                                                                                            >  1:419036/1‑148 (MQ=255)
                            cTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGga                                                                                                                         <  5:230253/148‑1 (MQ=255)
                             tttCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCg                                                                                                                           >  4:20639/1‑145 (MQ=255)
                              ttCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGga                                                                                                                         >  1:361280/1‑146 (MQ=255)
                              ttCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGga                                                                                                                         >  1:350597/1‑146 (MQ=255)
                                cAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGga                                                                                                                         >  6:271644/1‑144 (MQ=255)
                                        gcATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAAt                                                                                                             >  7:71900/1‑148 (MQ=255)
                                        gcATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGATGAAGCACGCTTTCCGGAGAGATCGATAAt                                                                                                             >  3:245896/1‑148 (MQ=255)
                                            aaaaTTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCg                                                                                                          >  1:130228/1‑147 (MQ=255)
                                                ttGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCt                                                                                                     <  3:243622/148‑1 (MQ=255)
                                                  gcgcATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTc                                                                                                    <  2:350597/147‑1 (MQ=255)
                                                  gagaaTTTTTTTACGATATACTAAAAGATAATAGCCTATATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTc                                                                                                    <  5:326547/143‑1 (MQ=255)
                                                    gcATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCttt                                                                                                                              <  2:216673/119‑1 (MQ=255)
                                                    gcATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCttt                                                                                                                              >  1:216673/1‑119 (MQ=255)
                                                        ttttttACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTCAGCGCAGCG‑TAaagcgaaagatcgtattg                                                                                                                       >  3:296111‑M2/1‑104 (MQ=255)
                                                        ttttttACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTCAGCGCAGCG‑TAaagcgaaagatcgtattg                                                                                                                       <  4:296111‑M2/122‑19 (MQ=255)
                                                          ttttACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTCAGCGCAGCG‑TAaagcgaaagatcgtattgacttagagcgtcattacggtattaaaa                                                                                            >  2:72866‑M2/1‑102 (MQ=255)
                                                            ttACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCAtttttt                                                                                          <  5:182276/147‑1 (MQ=255)
                                                                  tataCTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGa                                                                                   <  7:192403/148‑1 (MQ=255)
                                                                  tataCTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGa                                                                                   <  8:336905/148‑1 (MQ=255)
                                                                  tataCTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGa                                                                                   <  8:147588/148‑1 (MQ=255)
                                                                  tataCTAAAACATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGa                                                                                   <  3:46590/148‑1 (MQ=255)
                                                                    taCTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAg                                                                                 <  7:417067/148‑1 (MQ=255)
                                                                        aaaaGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTAc                                                                             >  3:348852/1‑148 (MQ=255)
                                                                        aaaaGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTAc                                                                             >  4:291834/1‑148 (MQ=255)
                                                                          aaGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCa                                                                           >  5:303728/1‑148 (MQ=255)
                                                                          aaGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCa                                                                           <  2:58702/148‑1 (MQ=255)
                                                                            gATAATCGCCTAGATATCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATATGATCTATCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCAGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACg                                                                         <  3:322974/148‑1 (MQ=255)
                                                                            gATAATAGCCTAGATCTCTAATCTTATTTTTAATACAGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACg                                                                         <  7:309150/148‑1 (MQ=255)
                                                                            gATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACTCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACg                                                                         <  7:88574/148‑1 (MQ=255)
                                                                            gATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACg                                                                         <  4:377244/148‑1 (MQ=255)
                                                                              taataGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGAt                                                                       <  6:406700/148‑1 (MQ=255)
                                                                                ataGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATgg                                                                     >  8:297293/1‑148 (MQ=255)
                                                                                ataGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATgg                                                                     <  2:419036/148‑1 (MQ=255)
                                                                                 taGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATggg                                                                    <  5:203254/148‑1 (MQ=255)
                                                                                   gCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATggggg                                                                  <  1:172440/148‑1 (MQ=255)
                                                                                    ccTAGATCTATAATCTCATTTTTAATACCTTAATGAATCTCTAATTCAATACGATATTTAGCTTTA‑CGCTGAGCTGAAGAACGCTTTCCGGAGAGATCGATAATTCTAAACTCACCATTTTTTATAATGAATTTACAAAGATtggttt                                                                 >  4:258085/1‑145 (MQ=255)
                                                                                       aGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGc                                                              >  2:129518/1‑148 (MQ=255)
                                                                                        gATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGc                                                                                                                                 <  2:161638/80‑1 (MQ=255)
                                                                                          tctcTAATCTCATTTTTAATACCGTAATGACGCTCTAAGACAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTAGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGc                                                              >  8:438740/1‑145 (MQ=255)
                                                                                             ctAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑cgctgcgct                                                                                                                                          <  1:243536/66‑1 (MQ=255)
                                                                                             ctAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGtt                                                                               >  1:426821/1‑125 (MQ=255)
                                                                                             ctAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGtt                                                                               <  2:426821/125‑1 (MQ=255)
                                                                                             ctAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGaaa                                                        >  4:337408/1‑148 (MQ=255)
                                                                                             ctAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCAGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACAACGATGGGGGTCGCCAGaaa                                                        >  4:6937/1‑148 (MQ=255)
                                                                                                aTCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGTACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAcca                                                     <  8:127632/148‑1 (MQ=255)
                                                                                                aTCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGaaa                                                        <  2:361280/145‑1 (MQ=255)
                                                                                                aTCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAcc                                                      <  7:297293/147‑1 (MQ=255)
                                                                                                aTCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAcc                                                      <  4:46130/147‑1 (MQ=255)
                                                                                                aTCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAcc                                                      <  3:406755/147‑1 (MQ=255)
                                                                                                aTCTCATTTTTAATACCGTAATGAAGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATATTGAAGTTACCACGATGGGGGTCGCCAGAAAcca                                                     <  8:121325/148‑1 (MQ=255)
                                                                                                 tctcATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAccat                                                    >  1:74240/1‑148 (MQ=255)
                                                                                                 tctcATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAcca                                                     <  1:129518/147‑1 (MQ=255)
                                                                                                  ctcATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGgag                                                                                                                        <  4:111086/79‑1 (MQ=255)
                                                                                                  ctcATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGt                                                                 >  3:172563/1‑134 (MQ=255)
                                                                                                  ctcATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAccatg                                                   >  2:94957/1‑148 (MQ=255)
                                                                                                   tcATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGaa                                                                                  <  1:393973/116‑1 (MQ=255)
                                                                                                    cATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACAATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAccatgc                                                  >  6:319025/1‑147 (MQ=255)
                                                                                                    cATTTATAATACCTTAATGACGCTCTAAGTCAATACGAACTTTCGCTTTA‑CTATTAGCTGAACCACGCTTTACTGAGAGATAGATAATTCGAACATCACAATTTTTTATAATAAAg                                                                                 >  2:393973/1‑116 (MQ=255)
                                                                                                      tttttAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAccatgccat                                               <  3:189518/148‑1 (MQ=255)
                                                                                                       ttttAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAccatgccatg                                              >  1:151925/1‑148 (MQ=255)
                                                                                                       ttttAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAccatgccatg                                              >  7:191222/1‑148 (MQ=255)
                                                                                                         ttAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGtt                                            >  6:36487/1‑148 (MQ=255)
                                                                                                           aaTACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTg                                           <  8:323300/147‑1 (MQ=255)
                                                                                                                cGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTaa                                     <  4:348852/148‑1 (MQ=255)
                                                                                                                 gTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGa                                                                                                         >  7:244292/1‑79 (MQ=255)
                                                                                                                 gTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAg                                    >  3:390519/1‑148 (MQ=255)
                                                                                                                      gACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCAt                                >  5:421102/1‑147 (MQ=255)
                                                                                                                            ctAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAattga                         >  8:398314/1‑148 (MQ=255)
                                                                                                                             tAAGTCAATACTATCTTTCGCTTTA‑CGCTGAGCTGAAGCACGCTTTACGGAGAGATCGATAATTCGAACCTCACCAttttt                                                                                           >  2:141190/1‑81 (MQ=255)
                                                                                                                             tAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATTAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAattgat                        >  2:200596/1‑148 (MQ=255)
                                                                                                                              aaGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGaa                                                                                                        >  4:1283/1‑67 (MQ=255)
                                                                                                                              aaGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGa                                                                                                         <  7:350568/66‑1 (MQ=255)
                                                                                                                                  cAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCa                                 <  3:259031/134‑1 (MQ=255)
                                                                                                                                   aaTACGATCTTTCGCTTtacgctgcgctgaagcgaaagatcgtattgacttagagcgtcattacggtattaaaaatgagattagagatctaggctattatcttttagtatatcgtaaaaaaatgcgcaattttatgcggcgtttgaa                    <  1:72866‑M1/147‑131 (MQ=255)
                                                                                                                                   aaTACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGa                  <  5:84762/148‑1 (MQ=255)
                                                                                                                                      aCGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAcc                                                      <  8:199224/109‑1 (MQ=255)
                                                                                                                                      aCGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAatt               >  2:342016/1‑148 (MQ=255)
                                                                                                                                      aCGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAatt               >  1:443704/1‑148 (MQ=255)
                                                                                                                                       cGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAattt              >  5:399552/1‑148 (MQ=255)
                                                                                                                                         aTCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAatttta            >  1:322256/1‑148 (MQ=255)
                                                                                                                                             ttCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAAcc                                                                                                      >  8:66659/1‑54 (MQ=255)
                                                                                                                                              tCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAattttatt          <  4:173631/145‑1 (MQ=255)
                                                                                                                                              tCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAatttta            <  3:112208/143‑1 (MQ=255)
                                                                                                                                                gCTTcagcgcagcgtaaagcgaaagatcgtattgacttagagcgtcattacggtattaaaaatgagattagagatctaggctattatcttttagtatatcgtaaaaaaatgcgcaattttatgcggcgtttgaaagggaaaccagcgc      >  8:14116‑M1/1‑4 (MQ=255)
                                                                                                                                                gCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAATTTTAtttttt      <  1:94957/147‑1 (MQ=255)
                                                                                                                                                   ttA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCAATTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGAATTAATTGAATGCTGAATTTTATTTTTTAgcg  >  5:111088/1‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
TGGGATTTTTTTTAGCGCGCTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTA‑CGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAATTTTATTTTTTAGCG  >  NC_000913/3800256‑3800550

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.