Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,978,503 Δ776 bp insB1insA insB1, insA

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1978503 1979278 776 76 [0] [0] 77 insB1–insA insB1,insA

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 19785020 (0.000)73 (1.190) 61/268 0.0 100% intergenic (‑305/+16) flhD/insB1 flagellar class II regulon transcriptional activator, with FlhC/IS1 transposase B
?NC_000913 1979279 = 0 (0.000)intergenic (‑64/‑474) insA/uspC IS1 repressor TnpA/universal stress protein

GTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATAAATGTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTAT  >  NC_000913/1979137‑1979421
                                                                                                                                              |                                                                                                                                              
gggtctttacacttatctaagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgt                                                                                                                                                >  1:996283‑M2/143‑143 (MQ=255)
  gtctttacacttatctaagatttttcctaaatcgacgccactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacgctcaattacttaacataaatgtat                                                                                                                                              >  2:424505‑M2/141‑143 (MQ=255)
  gtctttacacttatctaagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgtat                                                                                                                                              >  2:8500‑M2/141‑143 (MQ=255)
    ctttacacttatctaagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATaa                                                                                                                                            <  1:74402‑M2/5‑1 (MQ=255)
     tttacacttatctaagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAg                                                                                                                                           >  1:876387‑M2/138‑143 (MQ=255)
      ttacacttatctaagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGt                                                                                                                                          >  2:332169‑M2/137‑143 (MQ=255)
       tacacttatctaagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTc                                                                                                                                         <  1:869988‑M2/8‑1 (MQ=255)
          acttatctaagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATa                                                                                                                                      >  2:668078‑M2/133‑143 (MQ=255)
          acttatctaagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggagctgcgattttccataatgcgtgatgcagatcacacaaaaaactcaattacttaacataaatgTATAAGGCATa                                                                                                                                      >  2:600072‑M2/133‑143 (MQ=255)
            ttatctaagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACt                                                                                                                                    >  1:325684‑M2/131‑143 (MQ=255)
               tctaagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACtttt                                                                                                                                 <  1:550659‑M2/16‑1 (MQ=255)
               tctaagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagataacacaaaacactcaattacttaacataaatgTATAAGTCATACtttt                                                                                                                                 >  2:72495‑M2/128‑143 (MQ=255)
                  aagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaaaggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttcacataaatgTATAAGGCATACttttgtt                                                                                                                              >  2:622441‑M2/125‑143 (MQ=255)
                    gatttttcctaaatcgacgcaactgtactcgtcactacacgcacatcagtgggcgccgcgctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttgtttt                                                                                                                            <  1:856184‑M2/21‑1 (MQ=255)
                    gatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttgtttt                                                                                                                            >  1:917611‑M2/123‑143 (MQ=255)
                      tttttcctcaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTgg                                                                                                                          <  1:955223‑M2/23‑1 (MQ=255)
                       ttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTCGTTCtggt                                                                                                                         >  2:208277‑M2/120‑142 (MQ=255)
                         ttcctaaatcgacgcaactgtactcgtcactacacgcacatccaaaggaggggggctgcgattttcaataatgggtgatgcagataagacaataatctcgattacttaacataaatgTATAAGTGATACATTGGGCTTGGgtg                                                                                                                       >  1:377967‑M2/118‑143 (MQ=255)
                              aaatcgacgcaactgtactcgtcgctacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTAttt                                                                                                                  <  2:294854‑M2/31‑1 (MQ=255)
                              aaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTAttt                                                                                                                  <  1:703090‑M2/31‑1 (MQ=255)
                                      gcaactgtactcttcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGt                                                                                                          <  2:455706‑M2/39‑1 (MQ=255)
                                        aactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTa                                                                                                        >  2:1050649‑M2/103‑143 (MQ=255)
                                             tactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTCAAAAg                                                                                                   >  1:516726‑M2/98‑143 (MQ=255)
                                                  gtcactgcacgctcctgcaacggaggggggctgcgattttcaataatgcgggatgcaggtcacacaaaacactcaattacttatcataaatgCATAAGTCATACTTTTGGTTTGGGTGTATTTCAATCTGTTAAAAAGttttt                                                                                              <  2:768398‑M2/51‑1 (MQ=255)
                                                  gtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGttttt                                                                                              <  1:631749‑M2/51‑1 (MQ=255)
                                                  gtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGttttt                                                                                              <  2:71572‑M2/51‑1 (MQ=255)
                                                  gtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGttttt                                                                                              >  1:752518‑M2/93‑143 (MQ=255)
                                                   tcactacacgcacatacaacggtggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacagaaatgTATAAGGCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTc                                                                                             <  1:599141‑M2/52‑1 (MQ=255)
                                                    cactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcg                                                                                            >  1:449745‑M2/91‑143 (MQ=255)
                                                     actacacggacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacacgcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcgc                                                                                           <  2:163384‑M2/54‑1 (MQ=255)
                                                      ctacaagcacatacaacggaggggggctgcgattttctataatgcgtgatgcagatcacacaagacactcaattacttaacttaaatgTATGAGCCATCCTTTGGTGTGGGGTGTATTTCAATCTGGTAAACAGCGTTTcgct                                                                                          >  2:976026‑M2/89‑143 (MQ=255)
                                                       tacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTAATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcgcta                                                                                         >  1:201337‑M2/88‑143 (MQ=255)
                                                          acgcacatacaacggaggggggctgcgattttcaataatgcgtgctgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTCTTAAAAAGTTTATctctgcgc                                                                                      >  2:786834‑M2/85‑143 (MQ=255)
                                                                atacaacggaggggggcggcgattttcaataatgcgtgatgcagatcacacaagacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCGACGCTcgcaa                                                                                >  2:1032965‑M2/79‑143 (MQ=255)
                                                                 tacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCACTCTGTTAAAAAGTTTTTCGCTACGCTagccag                                                                               >  1:1039703‑M2/78‑143 (MQ=255)
                                                                 tacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTagcaag                                                                               >  2:731005‑M2/78‑143 (MQ=255)
                                                                  acaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTAAGCTagcaggc                                                                              >  1:154333‑M2/77‑143 (MQ=255)
                                                                     acggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTTGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCCagcaagcaac                                                                           >  2:586987‑M2/74‑142 (MQ=255)
                                                                      cggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTCTTGTTTTGGGTGTATTTCAATCTGTTAAAGAGTTTTTCGCTACGCTGATAAGCaaaa                                                                          >  2:250327‑M2/73‑143 (MQ=255)
                                                                        gaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattagttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAAt                                                                        <  2:16277‑M2/73‑1 (MQ=255)
                                                                        gaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacacgcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGGTTTTCGCTACGCTAGCAAGCAAAAAt                                                                        <  1:1131413‑M2/73‑1 (MQ=255)
                                                                          ggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGa                                                                      >  1:505292‑M2/69‑143 (MQ=255)
                                                                           gggggctgcgatgttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGaa                                                                     <  2:151499‑M2/76‑1 (MQ=255)
                                                                            ggggctcctattttcaataatgcgtgatgcagatcacacaaaacactcaagtacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGaaa                                                                    <  2:957514‑M2/77‑1 (MQ=255)
                                                                             gggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAAc                                                                   >  1:845045‑M2/66‑143 (MQ=255)
                                                                             gggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAAc                                                                   >  1:580884‑M2/66‑143 (MQ=255)
                                                                             gggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCCAGCAAGCAAAAATGAAAc                                                                   >  2:722256‑M2/66‑143 (MQ=255)
                                                                              ggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACa                                                                  <  1:1150067‑M2/79‑1 (MQ=255)
                                                                                 tgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCATTCTGTTAAAAAGTTTGTCGTTAGGTTGGCAAGAAAAAATGAAAcagca                                                               >  2:923618‑M2/62‑141 (MQ=255)
                                                                                 tgcgatttgcgataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGa                                                               <  2:1061341‑M2/82‑1 (MQ=255)
                                                                                     attttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGaataa                                                           <  2:209541‑M2/86‑1 (MQ=255)
                                                                                       tttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATc                                                         >  1:103593‑M2/56‑143 (MQ=255)
                                                                                          caataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGaa                                                      >  2:1055170‑M2/53‑143 (MQ=255)
                                                                                             taatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATg                                                   >  2:799181‑M2/50‑143 (MQ=255)
                                                                                              aatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGACATgg                                                  >  1:486452‑M2/49‑143 (MQ=255)
                                                                                                tgtgtgaggcagatcacacaaaacactcaagtacttaacataaatgTATAAGTCATACTTGTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTGGTGACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGa                                                <  1:530009‑M2/97‑1 (MQ=255)
                                                                                                  cgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATg                                              >  1:87818‑M2/45‑143 (MQ=255)
                                                                                                  cgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATg                                              <  1:682177‑M2/99‑1 (MQ=255)
                                                                                                       tgaagataacacaaaacacccaattacttaacataaatgTATAACTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGCATGTTgcg                                         >  1:548368‑M2/40‑143 (MQ=255)
                                                                                                          agatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGcac                                      >  2:96401‑M2/37‑143 (MQ=255)
                                                                                                             acacacgaaacactcagttacttaacctcaatgTATAAGGCACACTTTTGGTTTGGGTGTAGTTCAATCTGTGAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGt                                   <  1:1037181‑M2/110‑1 (MQ=255)
                                                                                                                 acaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCaaa                               <  1:501174‑M2/114‑1 (MQ=255)
                                                                                                                    aaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATa                            <  1:332169‑M2/117‑1 (MQ=255)
                                                                                                                       cactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACt                         <  1:668078‑M2/120‑1 (MQ=255)
                                                                                                                          tcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCGCCGTAAAAATAActctc                      >  1:661390‑M2/21‑141 (MQ=255)
                                                                                                                          tcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCAc                      >  1:324185‑M2/21‑143 (MQ=255)
                                                                                                                            aattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCg                    >  1:809196‑M2/19‑143 (MQ=255)
                                                                                                                            aattacttaacataaatgTATAAGTCATACTTGTGTTTTGGGTGTATTTCATTCTGTTAAAAAGTTTTTCGCTAAGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCAGCg                    >  2:616949‑M2/19‑143 (MQ=255)
                                                                                                                             attacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGt                   <  1:722256‑M2/126‑1 (MQ=255)
                                                                                                                               tacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTaa                 <  1:72495‑M2/128‑1 (MQ=255)
                                                                                                                                 cttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAaat               >  1:1142861‑M2/14‑143 (MQ=255)
                                                                                                                                    aacataaatgTAAAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAAGCGAAATGGGATGTTGCGCACAGTCAAGATAACGcgccgtaccaaat            >  1:425196‑M2/11‑137 (MQ=255)
                                                                                                                                     acataaatgTATAAGTCATATTTTTGTTTTGGGTGTACTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGAAAGCAAAAATGAAACAGGAATGATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAatc           <  2:1143196‑M2/134‑1 (MQ=255)
                                                                                                                                       ataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTACAAAGTTTTTTGCTACGCTAGCAAGCAAAAATGAAACAGGTATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTGACCGTAAAGcatcat         >  2:308661‑M2/8‑143 (MQ=255)
                                                                                                                                        taaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAatcatc        >  2:568152‑M2/7‑143 (MQ=255)
                                                                                                                                         aaatgTATAAGTCATACGTTTTTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCt       <  2:1074437‑M2/138‑1 (MQ=255)
                                                                                                                                              tataAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCtat  >  1:202488/1‑143 (MQ=255)
                                                                                                                                              |                                                                                                                                              
GTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATAAATGTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTAT  >  NC_000913/1979137‑1979421

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.