| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,979,486 | IS5 (+) +4 bp | intergenic (‑271/‑264) | insA ← / → uspC | IS1 repressor TnpA/universal stress protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1979486 = | 0 (0.000) | 78 (1.200) | 52/284 | 0.2 | 100% | intergenic (‑271/‑267) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1979489 | 0 (0.000) | 94 (1.450) | 54/284 | 0.1 | 100% | intergenic (‑274/‑264) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
Only 100 of 158 total aligned reads displayed.
GCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTG > NC_000913/1979344‑1979628 | tggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc < 2:806853‑M1/1‑1 (MQ=255)tggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatctaagagagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc > 1:850272‑M1/143‑143 (MQ=255)tggggagaacgccttaaagggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc > 2:1062449‑M1/143‑143 (MQ=255)gcaaAAATGAACGAGGAATAATCCAAATGTGATCTTGCTCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCCCTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAAc < 2:161992/143‑1 (MQ=255) ggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaagtgacccgataattcggaccttccCt < 2:956862‑M1/2‑1 (MQ=255) aaaaaTGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTa > 2:809799/1‑143 (MQ=255) ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa > 1:201519‑M1/140‑143 (MQ=255) gataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAt > 1:615401‑M1/139‑143 (MQ=255) ataacgcctgaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaagcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAtt > 1:385578‑M1/138‑143 (MQ=255) aacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagcggagaagaatttccccgcttattcgcaccttcgCCAATTaa < 2:9278‑M1/8‑1 (MQ=255) gcgcgctaaatggcgaagaaacggtctaaataggctgattcaaggcatgtacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTaaa > 2:903665‑M1/135‑143 (MQ=255) acgcattgaatggcaaagaaacgttctaaataggctgattcaaggcatttacgggagaaaagatcggctcaaacatgaagaactgcaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTaaa > 2:529629‑M1/135‑143 (MQ=255) cAGTAACAATCGATATCGGCTGTTGAGCACAGTAAACATAACTCATCGTAAATAATCATCTGCTATAAATACTCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgc < 2:35255‑M1/143‑10 (MQ=255) cAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgc < 1:517049‑M1/143‑10 (MQ=255) aaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttatccgcaccttccCTAATtaaataacaag < 2:911614‑M1/16‑6 (MQ=255) tggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaaagaaa > 1:812209‑M1/125‑143 (MQ=255) taatCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaa < 1:482172‑M1/143‑16 (MQ=255) ggcgaagaaacggtgtaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaaagaaag > 2:390482‑M1/124‑143 (MQ=255) ggcgaagaaaccgaatacaggggcgggttgaaggcatctacgggagcacaaatcggcccaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaaagaaag > 1:1091032‑M1/124‑143 (MQ=255) tCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAAAACCCGGCGAGTTGAGGTGAGTCAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtc > 1:1154576‑M1/1‑125 (MQ=255) cgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGc < 1:130200‑M1/22‑1 (MQ=255) gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACACAGAAAGGca < 1:48669‑M1/23‑1 (MQ=255) aagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAAGcaa < 1:1142409‑M1/24‑1 (MQ=255) aaTGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctg < 1:590006‑M1/143‑23 (MQ=255) aTGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctga < 2:613980‑M1/143‑24 (MQ=255) tGGGATTTTGCGCACAGTCAAAATAACTCACCGTAAAGAATCCTCTGCTATAAATAATCACTGTCATGCAAGACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAgcaaggtgcgaacaagtccctgat < 2:591309‑M1/143‑25 (MQ=255) gtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAAc < 1:275093‑M1/32‑1 (MQ=255) aTGTTGCGCACAGTCAAGATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatga < 1:991214‑M1/143‑29 (MQ=255) aTGTTGCGCACAGTAAACATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatga < 2:182484‑M1/143‑29 (MQ=255) aTGGTGCGCACAGTCAAAATGACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTGAAACAGACACTGACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatga < 2:189328‑M1/143‑29 (MQ=255) gTTGCGCACCGTCAAAATCACGCACCATAACTAATCATCTGCCATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgaga < 2:731103‑M1/143‑31 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgttaa > 2:130200‑M1/102‑143 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgttaa < 1:687638‑M1/42‑1 (MQ=255) ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgttaat < 1:254129‑M1/43‑1 (MQ=255) tCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtc > 2:908747‑M1/1‑102 (MQ=255) gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGa < 1:827535‑M1/45‑1 (MQ=255) aaaaTAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagctcatgtttgtcat > 2:291998‑M1/1‑100 (MQ=255) aaaaTAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcat > 1:299885‑M1/1‑100 (MQ=255) aaaTAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgaga > 1:181401‑M1/1‑99 (MQ=255) aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGt < 2:741421‑M1/50‑1 (MQ=255) aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgacagagacagccgagaaaaatttccccgcttattggcaccttccCTAATTAAATACAAAAAAAGGCAACAATCAAcataatgatgatgacacgt < 2:619613‑M1/50‑6 (MQ=255) aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTGCTTAAATAAAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGtt < 1:333870‑M1/51‑1 (MQ=255) ggcatttacgggagaaaaaatctgctcaaacatgaagaaaagaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGttt > 1:657068‑M1/92‑143 (MQ=255) tctctcCGTAAATAATCGTGTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACATACACTTGCCGCACAACAAACTAGggaaggtgcgaacaagtccctgatatgagagcatgtttgtcatctggag < 2:496574‑M1/142‑50 (MQ=255) gcatttacgggagaaaaaatcggctcaaacatgaaggaatgaaatgactgagtcagccgagaagaatttccccgcttattcgctccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTCATGAAATGtttt < 2:573712‑M1/53‑1 (MQ=255) gtccgtAAATCCTCATCTGGTATAAATAATCACGTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTATCTCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca < 2:141249‑M1/141‑53 (MQ=255) aCCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat < 1:511856‑M1/143‑54 (MQ=255) cGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatag > 1:988286‑M1/1‑88 (MQ=255) cgggagaaaaaaccggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACatata > 1:619636‑M1/84‑143 (MQ=255) agaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTaa > 2:544741‑M1/80‑143 (MQ=255) taatCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg > 1:97072‑M1/1‑82 (MQ=255) taatCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaaggccctgatatgagatcatgtttgtcatctggagccatagaacagg < 1:287773‑M1/143‑62 (MQ=255) aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAAcc < 1:216306‑M1/66‑1 (MQ=255) atcTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcaaacaagtccctgatatgagatcatgtttgtcatctagaaccatagaaaagggttca > 2:562138‑M1/1‑77 (MQ=255) tcTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcat > 1:160474‑M1/1‑76 (MQ=255) gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattctcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTa > 1:377274‑M1/69‑143 (MQ=255) cTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg < 1:89782‑M1/143‑72 (MQ=255) cTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgagaacaagtccctgatatgagatcatgtttgtaatctggggccatagaacagggttcatcatg > 1:588699‑M1/1‑72 (MQ=255) cTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAAAAAAATAAggaaggtgcgaacaagtcactgatatgagatcatgtttgtcatctggagacagcgaacaggggtcaacaag > 2:279065‑M1/1‑72 (MQ=255) tataAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAAAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatataacagggttcatcatta > 2:302138‑M1/1‑71 (MQ=255) taaataaTCACTTTCATGCAATACCGGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAagaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggagcatcatgagt > 1:320315‑M1/1‑69 (MQ=255) taaagaaTCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagt < 2:1046104‑M1/143‑75 (MQ=255) aaataaTCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc < 1:1048306‑M1/143‑76 (MQ=255) aataatCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtca > 1:305421‑M1/1‑67 (MQ=255) acatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTACCCACTTGTTTAATGCgg < 1:457796‑M1/81‑1 (MQ=255) acatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCgg < 1:1085868‑M1/81‑1 (MQ=255) acatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCgg < 1:457865‑M1/81‑1 (MQ=255) atCACGTTCATGCAATACCAGATAAGCTATTGTTAAACAGACGCTTGCCGCACAACAAACTAAggaaggtgcgaagaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaa < 2:585738‑M1/143‑81 (MQ=255) tCACTTTCATGCAATACCAGATAAGCTATTTGTAAACAGCCACAAACAGAAAAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac > 1:168312‑M1/1‑62 (MQ=255) aagaaatgaaatgacggagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAAt > 2:91009‑M1/58‑143 (MQ=255) gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCa < 2:204540‑M1/88‑1 (MQ=255) tttCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac > 1:856637‑M1/1‑58 (MQ=255) aatgaaatgactgagtgagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGt > 1:227461‑M1/54‑143 (MQ=255) atgaaatgactgggtcagccgagaagaatttccccgcttattctcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATTTTCCCAACTTTTTTAATGCGGAGAATCAGTa > 2:416752‑M1/53‑143 (MQ=255) aatgactgagtcagccgagaagaatttccccgcatattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACATGTTAAATGAGAAGAATAAGTACACt < 2:304751‑M1/95‑1 (MQ=255) cAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgcc > 1:199474‑M1/1‑51 (MQ=255) tACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacattcgcagac > 2:486357‑M1/1‑48 (MQ=255) tACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgcagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac > 1:226333‑M1/1‑48 (MQ=255) ctgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAACAAGGCAACAATCCACTTAATGTTAATGAAATGTTTTACATATATTAACCACTCGTTTAATGCGGAGAATCCGTATACTCtttt < 2:397904‑M1/100‑1 (MQ=255) tgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAGTGGGTGGTGTCTGTCCACTATTTTc < 2:555050‑M1/101‑1 (MQ=255) tcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTtat < 2:49709‑M1/105‑1 (MQ=255) gagCTATTTGTGAATAGCCACCTACCGCACAACAAACTAAggaagttgcgaacaagtccctgatatgagagcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccgtcgccgacagtgaatt < 2:676165‑M1/142‑104 (MQ=255) cTATTTTTAAACAGCCACTTCCCGCACAACAAACTAAggaaggtgcgaactagtcccttatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag < 2:406690‑M1/143‑107 (MQ=255) aTTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca < 1:908747‑M1/143‑109 (MQ=255) aTTGTTAAACAGACACTGACCGCACAACAAACTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca < 2:1051725‑M1/143‑109 (MQ=255) ttAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaa < 1:809799‑M1/143‑113 (MQ=255) cccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGAGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATtat < 2:873842‑M1/123‑1 (MQ=255) ccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATtata < 1:1009909‑M1/124‑1 (MQ=255) ccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATtata > 1:738463‑M1/20‑143 (MQ=255) ccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACACCTTATTTAATGCGTAGAATCAGTACCTTATTCTCTTTTATTTACCATAGAAattaca < 2:1121701‑M1/124‑3 (MQ=255) ttACCGCACAACAAACGAAggaaagtgcgaacaagtccctgatatgagatcatgtatgtcatctggagtcatagatcagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagac < 2:1075809‑M1/143‑125 (MQ=255) attcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGAtct < 1:172836‑M1/130‑2 (MQ=255) ccGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccag > 1:504366‑M1/1‑16 (MQ=255) accttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGa > 1:741421‑M1/8‑143 (MQ=255) aacaaACTAAggaaggtgcgaccaagtccctgatatgagatcatgtttgtcatctggcgccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcaggaagcgccgtcagaccagcaaaga > 2:130844‑M1/1‑10 (MQ=255) caaACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccaaaaaagaga > 2:429213‑M1/1‑8 (MQ=255) aaCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatt > 1:349164‑M1/1‑6 (MQ=255) aCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacggggttcatcatgagtcatccacttaccttcgccgacagtgaattcagcagtaagcgccgtaagaccagacaagagattc > 2:391542‑M1/1‑5 (MQ=255) aCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacatggttcatcatgagtcatcaacttaccctcgccgccagcgaattcagcagtaagcgacgcccgaccagaaccgagatta > 2:880415‑M1/1‑5 (MQ=255) cTAAggaaggtgcgaacaagtacctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgccagtgaattcagcagtaagcgccgtcagcccagaaaagagatttt > 1:712400‑M1/1‑4 (MQ=255) | GCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTG > NC_000913/1979344‑1979628 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |