Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	3,815,859	Δ82 bp		[rph]–[rph]	[rph], [rph]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3815859	3815940	82	71 [0]	[0] 71	[rph]–[rph]	[rph],[rph]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3815858	0 (0.000)	66 (1.150)	52/264	0.1	100%	pseudogene (24/48 nt)	rph	ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH
	?	NC_000913	3815941 =	0 (0.000)					pseudogene (609/669 nt)	rph	ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH

TGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCT  >  NC_000913/3815722‑3815999                                                                                                                                         |                                                                                                                                              tgcttgctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtccc                                                                                                                                         <  2:637547‑M1/143‑7 (MQ=255)    ttgctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctg                                                                                                                                      <  1:159533‑M1/143‑10 (MQ=255)        tAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgccccctgcact                                                                                                                                  >  2:841954‑M1/1‑130 (MQ=255)         aaGCGGAAGTTCGACACACTGTCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCCGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcactt                                                                                                                                 <  2:596557‑M1/143‑15 (MQ=255)         aaGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcactt                                                                                                                                 <  2:51732‑M1/143‑15 (MQ=255)           gcgcAAATTCAATAAACGGGCGCTGATATGGTTTCATGCCTTCGCCCCGCATCTTACTTTTCTACAGAGAAAAAAGAGGGGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttca                                                                                                                               <  2:674404‑M1/143‑17 (MQ=255)              cAAATTCAATAAACTTGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatg                                                                                                                            <  2:754202‑M1/143‑20 (MQ=255)              cAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcccttcaatg                                                                                                                            >  2:1003593‑M1/1‑124 (MQ=255)                aaTTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGCCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgct                                                                                                                          >  1:817099‑M1/1‑122 (MQ=255)                  ttCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtctcctgcacttcaatgatgc                                                                                                                        >  1:460498‑M1/1‑120 (MQ=255)                    cAATAATCTTGCGCTGATATTGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACACAAAAAAGGCGTCTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgc                                                                                                                      <  2:345597‑M1/143‑26 (MQ=255)                      aTAAACTGGCGCTGAGATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgccc                                                                                                                    <  1:943475‑M1/143‑28 (MQ=255)                             ggCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCAACTCCTCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcg                                                                                                             <  1:702239‑M1/143‑35 (MQ=255)                             ggCGCTGATATGGTGGCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcg                                                                                                             <  2:105714‑M1/143‑35 (MQ=255)                                        ggTTTCATGCCTTCGGTCCTCGACTTACGTTTCTAGAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactac                                                                                                  <  1:1089594‑M1/143‑46 (MQ=255)                                          tttCATGCCTTCGCTCCTCATCTTACTTTTCTACAGGCAAAAAAAAGGCGCCTCATCAGTCGCCTTAAAAATCAGTTTGCCAGAGCCGCCTTCTGCcgtcccctgcacttcaatcaggcgcccctcttcggtcaccactaagc                                                                                                >  2:41361‑M1/1‑96 (MQ=255)                                          tttCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcccccctcttcggtcatcactacgt                                                                                                >  1:367624‑M1/1‑96 (MQ=255)                                           ttCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactccgtt                                                                                               >  1:362469‑M1/1‑95 (MQ=255)                                            tcgggccttCGCTCCTCCTCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttc                                                                                              <  2:1068655‑M1/139‑50 (MQ=255)                                               tGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatccctacgttcctt                                                                                           >  1:1049291‑M1/1‑91 (MQ=255)                                                      gCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGGCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttgatggaggtct                                                                                    >  2:894712‑M1/1‑84 (MQ=255)                                                           tcATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcg                                                                               >  1:325409‑M1/1‑79 (MQ=255)                                                                ttACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTACTGCcgtcccctgcacttcaatgatacgcccgtcttcggtcatcactacgttcatgtcggtccctccgaccga                                                                          >  1:34938‑M1/1‑74 (MQ=255)                                                                   cTTTCCTACAGACAAAAGAGAGGCGACTCATCAGTCGCCTTAAAGATCAGCTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtc                                                                       <  1:1009795‑M1/143‑73 (MQ=255)                                                                    ttttCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGACAGCGCCGCCTTCTGCcgtaccctgcacttcaatgatgcgcacgtcttcggtcatcactacgttcatgtcggtctctgcggcagagact                                                                      >  2:566360‑M1/1‑70 (MQ=255)                                                                        cTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaa                                                                  <  2:89808‑M1/143‑78 (MQ=255)                                                                         tcccgccaaaacaAAGGCGACGCACCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaac                                                                 <  1:172460‑M1/137‑79 (MQ=255)                                                                         tACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaac                                                                 <  1:660426‑M1/143‑79 (MQ=255)                                                                            aGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgta                                                              <  1:1099910‑M1/143‑82 (MQ=255)                                                                            aGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgta                                                              <  2:139057‑M1/143‑82 (MQ=255)                                                                            aGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggaagagccttcaacgta                                                              >  2:694688‑M1/1‑62 (MQ=255)                                                                            aGACAAAAAAAAGGCGACTCACCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtctt                                                                     >  1:735044‑M1/1‑62 (MQ=255)                                                                            aGACAAAAAAAAGGCGACTCACCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtctt                                                                     <  2:735044‑M1/136‑75 (MQ=255)                                                                             gACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtat                                                             <  2:492135‑M1/143‑83 (MQ=255)                                                                             gACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtat                                                             <  1:556031‑M1/143‑83 (MQ=255)                                                                              aCAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtatt                                                            >  1:839381‑M1/1‑60 (MQ=255)                                                                              aCAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgagcctgagctatatcgtctctacgttcatgtcggtctctgcggcagagtcttcaacgtatt                                                            >  1:813847‑M1/1‑60 (MQ=255)                                                                                aaaaaaaaGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatccgcccgtcttcggtcgtcactccgctcatggcggtccctccgcccgagtcaccaccgtattcc                                                          >  2:64159‑M1/1‑58 (MQ=255)                                                                                aaaaaaaaGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCagtcccctgcacttcaatgatgcgcccgtcttcggtcatcactccgttcatgtcggtctctgcggccgagtcttcaacgtatccc                                                          >  2:555643‑M1/1‑58 (MQ=255)                                                                                 aaaaaaaGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcgctcctcactacgttcacgtccgtctctgcgccagcgccttcaccgtcctcca                                                         >  2:250496‑M1/1‑57 (MQ=255)                                                                                   aaaacGGCGCCTCCTCAGTCGCCTTAAAAATCAGTTTGCCAGCACCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccaga                                                       <  1:137220‑M1/143‑89 (MQ=255)                                                                                   aaaaaGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccaga                                                       <  1:1096933‑M1/143‑89 (MQ=255)                                                                                    aaaaGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagat                                                      <  1:727619‑M1/143‑90 (MQ=255)                                                                                      aaGGCGACTCATCAGTCGCGTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcg                                                    <  2:790653‑M1/143‑92 (MQ=255)                                                                                        ggCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctccgcggcagagtcgtcaacgtattccagatcgca                                                  <  2:582709‑M1/143‑94 (MQ=255)                                                                                         gCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaaggtattgcagatcgcaa                                                 >  1:993183‑M1/1‑49 (MQ=255)                                                                                         gCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaa                                                 >  1:964551‑M1/1‑49 (MQ=255)                                                                                          cGACTCATCAGTCGCCTTAAAAACCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaa                                                <  1:86292‑M1/143‑96 (MQ=255)                                                                                           gACTCATCAGTCGCCTTAACAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtccctgcggccgagtcttcaccgtcttccagatcccaaac                                               >  2:138731‑M1/1‑47 (MQ=255)                                                                                               catcaGTCGCCCTAGGAATCAGTGGGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgccttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattgcagatcgcaaaccgct                                           <  2:293857‑M1/143‑101 (MQ=255)                                                                                                atcaGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgctt                                          <  2:615‑M1/143‑102 (MQ=255)                                                                                                atcaGTCGCCTAAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgttggtctctgcggcagagtattcaaagtattccagatcgaaaaccgctt                                          >  1:730579‑M1/1‑42 (MQ=255)                                                                                                 taagtCGCCGTAAACCACAGTTTGCGAGCGCCGCCTTCGGCcgtcccctgcactccaatgatgcgcccgtgttcggtcatcattactttcatggcggtctctgcggcagagtcttcaacgtattccagatcgcaaacctcttc                                         <  1:763635‑M1/141‑103 (MQ=255)                                                                                                     tctccttaAAAATCATTTTGCCAGCGCCCCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtctgcggtcctcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccaaatcgcaaaccgcttcgccg                                     <  2:973866‑M1/140‑107 (MQ=255)                                                                                                        ccTTAAAAATCAGTCTGCCCGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttc                                  <  2:216766‑M1/143‑110 (MQ=255)                                                                                                                atcgctttgccagCTCTGCCTTCTTCcggcccgtgcacttcattgatgcgcccgtcttcggtcatcgctacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattcc                          <  2:7222‑M1/138‑118 (MQ=255)                                                                                                                aTCAGTTTGCCAGCGCCGCCTCCTGCcgtcccctgcacttcaacgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattcc                          <  2:803083‑M1/143‑118 (MQ=255)                                                                                                                  cAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtctacagtacgcagtgcgttcatgtcggtctctgcggcagagtcttcgacgtattcgagatcgcgaagcgcttcgccgttcacgactccgg                        >  1:420893‑M1/1‑24 (MQ=255)                                                                                                                    gtctgccGGCGCCGCCGTCCGCcgccccctgcacttccacgacgcgcccgccttcggtcatcactacgtacatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgaca                      <  2:246813‑M1/140‑122 (MQ=255)                                                                                                                    ggttgcCAGCGCCGCCTTCTGCcgtccccggcacttcaagtttgcgcccgtcttcggtcatcactacgttcatgtccggctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgaca                      <  2:178454‑M1/141‑122 (MQ=255)                                                                                                                    gTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttccacgtattccagatcgcaaaccgcttccccgtacacaattccgaca                      >  2:628800‑M1/1‑22 (MQ=255)                                                                                                                         ccAGCCCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccacatcgcaaaccgcttcgccgttcacaattccgacagaaac                 <  1:48259‑M1/143‑127 (MQ=255)                                                                                                                          cAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccggtcacaattccgacataagca                >  1:600048‑M1/1‑16 (MQ=255)                                                                                                                           aGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttccacgtattccagatcgcaaaccggttgcccgttcacaattccgacagcaactg               >  2:1024956‑M1/1‑15 (MQ=255)                                                                                                                           aGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagcaactg               >  1:1020789‑M1/1‑15 (MQ=255)                                                                                                                             cgccgcCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcg             <  1:1042972‑M1/143‑131 (MQ=255)                                                                                                                                cgccTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgccagaaactgcggct          >  1:489646‑M1/1‑10 (MQ=255)                                                                                                                                    ttCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattcagacagaaactgctgctaccc      >  1:1006944‑M1/1‑6 (MQ=255)                                                                                                                                      cTGCcgtcccctgcacttcaatgatgcgcccgtcttccaacatcactactgtcgtgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcggctaccatc    >  1:472739‑M1/1‑4 (MQ=255)                                                                                                                                       tGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcggcgaccatcc   >  1:264652‑M1/1‑3 (MQ=255)                                                                                                                                        gCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcggctaccatccc  >  1:663983‑M1/1‑2 (MQ=255)                                                                                                                                         |                                                                                                                                              TGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCT  >  NC_000913/3815722‑3815999

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑