breseq  version 0.33.1  revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Marginal new junction evidence (lowest skew 10 of 15 shown)
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4335640 =171 (1.130)4 (0.030) 3/494 NT 2.5% intergenic (‑50/+54) eptA/adiC lipid A phosphoethanolamine transferase/arginine:agmatine antiporter
?NC_000913 4335670 = 150 (1.050)intergenic (‑80/+24) eptA/adiC lipid A phosphoethanolamine transferase/arginine:agmatine antiporter
* ? NC_000913 4225888 =192 (1.270)3 (0.020) 3/512 NT 1.7% coding (2061/3684 nt) metH homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent
?NC_000913 4227007 = 159 (1.070)coding (3180/3684 nt) metH homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent
* ? NC_000913 3622015 =0 (0.000)3 (0.020) 3/512 NT 2.6% coding (2824/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 3765561 = 223 (1.500)coding (3379/4134 nt) rhsA Rhs protein with putative toxin 55 domain; putative polysaccharide synthesis/export protein; putative neighboring cell growth inhibitor
* ? NC_000913 3484544 =169 (1.120)3 (0.020) 3/502 NT 1.8% coding (55/870 nt) prkB putative phosphoribulokinase
?NC_000913 = 3484540 162 (1.110)coding (51/870 nt) prkB putative phosphoribulokinase
* ? NC_000913 3156579 =148 (0.980)3 (0.020) 3/500 NT 2.2% intergenic (+61/‑44) yqhD/dkgA aldehyde reductase, NADPH‑dependent/2,5‑diketo‑D‑gluconate reductase A
?NC_000913 3156603 = 124 (0.860)intergenic (+85/‑20) yqhD/dkgA aldehyde reductase, NADPH‑dependent/2,5‑diketo‑D‑gluconate reductase A
* ? NC_000913 = 2943600145 (0.960)4 (0.030) 3/506 NT 2.7% coding (264/1206 nt) csdA cysteine sulfinate desulfinase
?NC_000913 = 2943639 143 (0.980)coding (303/1206 nt) csdA cysteine sulfinate desulfinase
* ? NC_000913 2765420 =116 (0.770)3 (0.020) 3/434 NT 2.8% intergenic (‑267/+93) yfjL/yfjM CP4‑57 putative defective prophage, DUF4297/DUF1837 polymorphic toxin family protein/CP4‑57 prophage; uncharacterized protein
?NC_000913 = 2765411 112 (0.890)intergenic (‑258/+102) yfjL/yfjM CP4‑57 putative defective prophage, DUF4297/DUF1837 polymorphic toxin family protein/CP4‑57 prophage; uncharacterized protein
* ? NC_000913 895642 =178 (1.180)3 (0.020) 3/508 NT 1.7% coding (652/1134 nt) potG putrescine ABC transporter ATPase
?NC_000913 895887 = 165 (1.120)coding (897/1134 nt) potG putrescine ABC transporter ATPase
* ? NC_000913 = 696741120 (0.790)4 (0.040) 4/366 NT 4.0% intergenic (‑1/+15) metU/glnW tRNA‑Met/tRNA‑Gln
?NC_000913 697135 = 107 (1.010)intergenic (‑2/+378) metT/asnB tRNA‑Met/asparagine synthetase B
* ? NC_000913 = 641354103 (0.680)3 (0.020) 3/508 NT 2.9% intergenic (+36/+85) ahpF/uspG alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)‑binding/universal stress protein UP12
?NC_000913 = 641366 103 (0.700)intergenic (+48/+73) ahpF/uspG alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)‑binding/universal stress protein UP12