| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,001,645 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4001645 | 4001649 | 5 | 30 [0] | [0] 29 | corA | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001644 | 0 (0.000) | 29 (0.760) | 25/284 | 0.5 | 100% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001650 = | 0 (0.000) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
CAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGT > NC_000913/4001502‑4001779 | ctgTATGGATTGTTCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGACCTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCat < 2:387877/141‑1 (MQ=255) tgagtgatcTTGTCGAATCGGACTACGACTAGCGACTGCGTGTACAATCTAAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcctt < 1:544168‑M1/139‑7 (MQ=255) tGATCGTGCCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttc < 1:665687‑M1/143‑11 (MQ=255) ttGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctt > 1:659076‑M1/1‑128 (MQ=255) tGTCGGACCGGACGACGATTAGCGACTGCGCGTATAATTTGATCTTGGTCATAGGGTGGCAACCCGCCGGGAACGGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttt < 1:33613‑M1/143‑17 (MQ=255) gTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttg < 2:599641‑M1/143‑18 (MQ=255) gAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGCACTGGCCGTCATCGATGCATCGGCGCGTTTCTTTGAAGACGAAAACGGCATAAATatccttcttcttaattgaag > 1:237527‑M1/1‑123 (MQ=255) ctggacGACGACGAGTGACTGCGCGTACATTCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACGGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatg < 1:231721‑M1/141‑24 (MQ=255) gacgacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaag > 1:593284‑M1/1‑114 (MQ=255) tgtgtgtacaaTCTGAACTTGGTCGGAGCCTGGCAACCCGCCGGGAACTGGAAGACGACGAAGCATCGGCACGGTTCGGTGAAGACGACGACGGCCTGCATcgccttcttcttctttgaagatgcggaagatcacgccggtaa < 1:82874‑M1/138‑43 (MQ=255) tGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACTACGTCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaa > 1:206987‑M1/1‑101 (MQ=255) aaTCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgt > 2:36493‑M1/1‑92 (MQ=255) tCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGGCGACGACGGCCTGCATctccttcttcttctttgaagcagcggcagaacacgccggtaactccactgtgg > 2:434901‑M1/1‑90 (MQ=255) ttGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGCAGACGACTACGGCCTGCATctccttcttcttctttgatgatacggaagatcacgcaggtaactcaactaatgcatttac > 1:629646‑M1/1‑83 (MQ=255) ttGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGACGACGACGACGGCCTGCCTctccttcctcttctttgcagatgcgtaagatcacgccggtaacaacaatgtggaatatac > 1:482104‑M1/1‑83 (MQ=255) ccTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgat < 2:380479‑M1/143‑71 (MQ=255) ggCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaaaatcacgccggtaactccactgtggcatttaccatccgtgatggt > 1:571596‑M1/1‑70 (MQ=255) ccgcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgcggcatttaccatccgtgctggtcgtccg > 2:649502‑M1/1‑64 (MQ=255) gccgcggactggaagAGAGCGAAGCAGCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtt < 1:289674‑M1/136‑82 (MQ=255) gcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtt > 1:143178‑M1/1‑62 (MQ=255) gcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacaccggtaactacactgtggcatttaccatccgtgatggtcgtccgtt > 1:391955‑M1/1‑62 (MQ=255) tGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcaagccggtaactccactgtggcatttaccatccgtgatggtcgtctgattactctgcg > 2:684723‑M1/1‑53 (MQ=255) cGAAGCATGGGCAGGTTTCTTCTAACACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcatgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaa < 2:279830‑M1/143‑101 (MQ=255) aaGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaggatcacgccggtaactccactgtggcatttagcatacgtgatggtcggatgtttactctgcgtgagcgtgaact > 1:612299‑M1/1‑41 (MQ=255) ttCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtgtactctgcgtgagcgtgaactgcccgcttttcgtc > 2:686263‑M1/1‑27 (MQ=255) tttGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgctcttcgcctgt > 1:691166‑M1/1‑24 (MQ=255) gacgacgacGGCCTGCATcttcttctgcttctttgaagatgcggaagatcacgccggtaactccactgtggcctttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgta < 2:329843‑M1/143‑126 (MQ=255) gacgacgacGGCCTGCATctccttcttcttctttgaatatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgta < 2:10833‑M1/143‑126 (MQ=255) gCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtctcgtatgcgtgcccg > 1:390569‑M1/1‑8 (MQ=255) gCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatacgtgatgggcgtctgtttactccgcgtgagcgtgaactgcccgcttttcttcggtactgtgtgcgtgccag > 2:34041‑M1/1‑8 (MQ=255) | CAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGT > NC_000913/4001502‑4001779 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |