| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,979,486 | IS5 (+) +4 bp | intergenic (‑271/‑264) | insA ← / → uspC | IS1 repressor TnpA/universal stress protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1979486 = | 0 (0.000) | 74 (1.560) | 56/284 | 0.0 | 100% | intergenic (‑271/‑267) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1979489 | 0 (0.000) | 67 (1.420) | 42/284 | 0.1 | 100% | intergenic (‑274/‑264) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
Only 100 of 140 total aligned reads displayed.
AAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTGAT > NC_000913/1979347‑1979630 | aaaaTGAAACAGGAATAATCGAAATGTGATGAAACTGCCAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTaa < 2:602928/143‑1 (MQ=255)aaaaTGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTaa < 1:220594/143‑1 (MQ=255) gataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAt < 1:407152‑M1/5‑1 (MQ=255) taacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTa < 1:145596‑M1/7‑1 (MQ=255) gAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaag < 1:707148‑M1/143‑6 (MQ=255) aagcaggAATAATTTAAATGGGATGTTGCGCACAGTCAATATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaagg < 2:717392‑M1/140‑7 (MQ=255) gccttaaatggcgaagaaacggtctaaagaggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATa > 2:236433‑M1/133‑143 (MQ=255) gccttaaacggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgacttagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATa > 1:646440‑M1/133‑143 (MQ=255) taatCGAAATGGGATGTTGCGCACAGTCACAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCCCAACAAACTAAggaaggtgcgaacaa < 1:504695‑M1/143‑16 (MQ=255) gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGca < 1:223456‑M1/23‑1 (MQ=255) gagataccgtccaaataggctgattctaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagattttccccgcttattcgcaccttccCTAATTAAATTCAAAGaaaggaaa > 2:63762‑M1/120‑140 (MQ=255) gttggGCTGTTGCGCACAGTCAAAATACCTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCCATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctg < 2:592755‑M1/141‑23 (MQ=255) tGGGATGTTGCGCGCAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTACCGGGACACATACCCCACAACAAACTAAgggacgtgcgaacaagttgctgat > 1:392404‑M1/1‑119 (MQ=255) gcgcACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggtaggtgcgaacaagtccctgatatgagatca > 2:829183‑M1/1‑110 (MQ=255) gcgcACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggacggtgacaacaagtccctgatatcagaaca > 2:313656‑M1/1‑110 (MQ=255) caGTTAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgttt < 2:22748‑M1/143‑39 (MQ=255) aGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttg < 1:142286‑M1/143‑40 (MQ=255) gTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgt > 2:364050‑M1/1‑103 (MQ=255) gTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCAAAAACAACTACgggttgtgcgaacaagtccctgatatgagatcatgtttgt < 1:442113‑M1/143‑41 (MQ=255) aaaTAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc > 1:245631‑M1/1‑99 (MQ=255) aaTAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACACCAAACTAAggaaggtgcgcacaagtccctgatatgagatcatgtttgtcatct < 1:598359‑M1/143‑46 (MQ=255) aaTAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct > 1:767900‑M1/1‑98 (MQ=255) aaTAACTCACCGTAAATAACCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagacaatgtgtgtcagct > 2:851‑M1/1‑98 (MQ=255) tAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcagctgg > 1:246711‑M1/1‑96 (MQ=255) ggcagttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGttt > 1:100762‑M1/92‑143 (MQ=255) ggatatacgggagaaaaaacaggcgcaaacatgaagaaatgaaatgacttagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGtttt > 2:136838‑M1/91‑143 (MQ=255) ctgaccgTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagc < 2:803918‑M1/140‑51 (MQ=255) caattacgggagaagaaatcgtcgcaaacatgaagaaagtaaatgactgagtcagccgagaagaagttccccgcttattcgcaccttccCTAATTAAATACAAAGACGGGCAACGATCAACTTAACGGT‑AAGTAAATGTTTTa > 2:185076‑M1/90‑143 (MQ=255) cgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACatata < 1:567082‑M1/60‑1 (MQ=255) tAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACGTACCGCACAACAAACTAAggaaggtgcgagcaagtccctgatatgagatcatgtttgtcatctggagccatagaa < 2:142985‑M1/143‑58 (MQ=255) gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATAAAAAGAAAGGCAACAATGT‑CGTACTGGGGAAGGAAATGTTTTACatatat < 1:534162‑M1/61‑1 (MQ=255) aaaTAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaac > 1:678428‑M1/1‑85 (MQ=255) taatCATCTGCTATAAATAATCACTTTCATGCAATACCAGCTAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacacgtccctgatatgagatcatgtttgtcatctggagccatagaacagg > 2:812079‑M1/1‑82 (MQ=255) gaaaaaagcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAAc > 2:353069‑M1/79‑143 (MQ=255) aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaattaccccgcatattcccaccttcaCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTATTACATAAATTAaca < 2:21376‑M1/66‑2 (MQ=255) aaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCAc < 1:153749‑M1/68‑1 (MQ=255) aaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccacgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCAc < 2:288252‑M1/68‑1 (MQ=255) tcTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgtgatcatgtgtgtcatctggagccatagaacaggggtcat > 2:445719‑M1/1‑76 (MQ=255) tataAGTAATCGCGGTCATGCAATACCAGATAAGCTATGTGTGAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaagaagtccctgagatgagatcatgtttgtcatctggagccatagaacagggttcatcatga < 2:313342‑M1/143‑73 (MQ=255) tataAATCATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga < 2:452379‑M1/143‑73 (MQ=255) tataAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga < 2:741018‑M1/143‑73 (MQ=255) ctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTaa < 1:307494‑M1/76‑1 (MQ=255) caaacatgaagaaatgaaattactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATg > 1:681485‑M1/66‑143 (MQ=255) caaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATg < 1:314533‑M1/78‑1 (MQ=255) aaacatgaagaaatgaaatgactgagtcagccgagaagaatttcctcgcttattcgcaccttcaCTAATTAAATACAAAGAAAGGCAACAACCAACTTAATGTT‑ACTGAAATCGTTTACATATATTAACCACTTGTTTAATGc < 1:340330‑M1/79‑1 (MQ=255) acatgaagaaatgagatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATGCgg > 2:103540‑M1/63‑143 (MQ=255) taatCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagaacatgtttgtcatctggagccatagaacagggttaatcatgagtcatc > 2:690122‑M1/1‑65 (MQ=255) tgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGgaga < 2:115789‑M1/84‑1 (MQ=255) gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGaa < 2:584538‑M1/85‑1 (MQ=255) aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAAt < 2:149721‑M1/86‑1 (MQ=255) acctgcctgcaatacCAGATAAGCGATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt < 2:280411‑M1/136‑84 (MQ=255) tttCATGCAATACCAGATAAGCTATTTTTAAACAGAGACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac > 1:552979‑M1/1‑58 (MQ=255) tttCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac > 1:680913‑M1/1‑58 (MQ=255) aaatgatatgactaaggcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAg > 2:685716‑M1/55‑143 (MQ=255) aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAg < 1:245529‑M1/89‑1 (MQ=255) aatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGt > 1:395273‑M1/54‑143 (MQ=255) atgaaatgactgagtcagccgagaagaatttccccgcgtattcgcaccttccCTACTTAAATACAAAGAAACGCAACAATCAACTTAATGTT‑AACGAAATGATTTACATATATTAACCACTTCTTTAATGCTGAGAATCAGTa < 2:123204‑M1/91‑1 (MQ=255) aaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTTTTTAATGCGGAGAATCAGtacat < 2:589540‑M1/94‑2 (MQ=255) aaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTacac < 1:332990‑M1/94‑1 (MQ=255) actgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTAttt < 1:96325‑M1/99‑1 (MQ=255) aCCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca < 1:707662‑M1/143‑97 (MQ=255) tgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTc > 2:567082‑M1/43‑143 (MQ=255) tgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTc < 1:500971‑M1/101‑1 (MQ=255) tgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTc > 1:44054‑M1/43‑143 (MQ=255) gagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCt < 1:203953‑M1/102‑1 (MQ=255) aTTTTTAAACGGACACTTACCGCACAACAAACTAAgggaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtaaaacaataactttcgccgacagtgaattcagca < 2:520991‑M1/143‑109 (MQ=255) aagaattgccccgcttattcgcaccgtccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACAtt > 1:689534‑M1/30‑143 (MQ=255) tAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgcttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagcgaattcagcagtcag > 1:105191‑M1/1‑30 (MQ=255) aCAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagttcattcagcagtacgcgc > 1:591675‑M1/1‑27 (MQ=255) tccccgcttattcggactttccCTAATTAAATACAAAGAAAGGCAACAATCAACGTAATGTT‑AATGAAAAGTTTTACATATATGAACCACTTGTTTAATGCGGAGAATCAGTACACTAGTTTCTTATAATTACATTTGAAAtt > 2:400141‑M1/23‑143 (MQ=255) gACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt < 2:17795‑M1/143‑120 (MQ=255) ccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCACCTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATtata < 1:105491‑M1/124‑1 (MQ=255) ccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATtata > 2:82178‑M1/20‑143 (MQ=255) cgcttattcgcaccttctCTAAGTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAGTCAGTACACTATTTTCTTATAATTCCATTTGAAATTatat > 2:723026‑M1/19‑143 (MQ=255) cacTTACCGCCCAACAAACTAAggaaggtgcgaacacgtccctgatatgagatcatgtttgtcatctggagccatagcacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtca < 1:577229‑M1/143‑122 (MQ=255) ttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGaaa < 1:552936‑M1/119‑1 (MQ=255) ttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGaaa > 2:552936‑M1/16‑134 (MQ=255) ttACCACACAACAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagac < 2:366882‑M1/143‑125 (MQ=255) cGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatccagcagtaagcgccgtcagaccaga > 2:161000‑M1/1‑15 (MQ=255) gcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCgg < 1:215496‑M1/134‑1 (MQ=255) tgagttgactaaggaaggtgcgaacaagtccctgatatgatatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaa < 2:277306‑M1/136‑132 (MQ=255) acaacaAACTAAggaaggtgtcaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaa < 2:556639‑M1/143‑132 (MQ=255) tccttccCTAATTATATACAAATAATGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGa > 2:485404‑M1/8‑143 (MQ=255) accttccCTAATTAAATACAAGGTAAGGCAACAATCAACTTAATGTT‑ACTGAAATGTTTTACATCTATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATACTCTAATAATTACATTTGAAATTATATGATCACCGGGa > 2:344743‑M1/8‑143 (MQ=255) aacaaACTAAggaaggtgcgaacaagtcccggatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaaga < 2:327968‑M1/143‑134 (MQ=255) tacgaaggaaggggcgaaaaagccactgaaatgaggtcatgttcgtgatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatt < 1:49737‑M1/139‑138 (MQ=255) ccCTAATTAAATACAAAGAAAGGGAGCATTCGACTTAATGTT‑TATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGAt > 1:316086‑M1/3‑143 (MQ=255) aaCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagagttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagctccgtcagaccagaaacgaatgt > 1:271210‑M1/1‑6 (MQ=255) aCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattt > 1:597137‑M1/1‑5 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacccgagaagagatttt > 2:753534‑M1/1‑4 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattct < 1:726775‑M1/143‑140 (MQ=255) cTAATTAAATACAAAGAAAGGCAACAAGCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGtgattg < 1:515578/143‑1 (MQ=255) tgaggaaggtgctaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttc < 1:826387‑M1/141‑141 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttc > 1:790942‑M1/1‑3 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttc < 1:577348‑M1/143‑141 (MQ=255) tAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGtgattga > 1:263338/1‑143 (MQ=255) tAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGGTTTACATATATTAACCACTTGTTTAATGCGGAAAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCATCGGGCGtgattga > 2:712997/1‑143 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagcttttct > 2:401745‑M1/1‑2 (MQ=255) aggtaggtgcgaacaagtcgctgataggagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt < 2:527666‑M1/143‑143 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatacagttagctgttgggatgcgtagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt > 1:816301‑M1/1‑1 (MQ=255) | AAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTT‑AATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTGAT > NC_000913/1979347‑1979630 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |