Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
JC JC | NC_000913 | 3,553,103 | IS5 (+) +4 bp | coding (19‑22/2706 nt) | malT → | mal regulon transcriptional activator |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 2288919 = | NA (NA) | 49 (0.870) | 38/284 | 0.5 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
? | NC_000913 | 3553103 = | 0 (0.000) | coding (19/2706 nt) | malT | mal regulon transcriptional activator | |||||
* | ? | NC_000913 | = 2290113 | NA (NA) | 81 (1.450) | 49/282 | 0.1 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
? | NC_000913 | = 3553106 | 0 (0.000) | coding (22/2706 nt) | malT | mal regulon transcriptional activator |
Only 100 of 121 total aligned reads displayed.
TTCAGACACATAAAAAAACGTCATCGCTTGCATTAGAAAGGTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAGACCACCCTCATTTCCCAGTGGGCGGC > NC_000913/3552962‑3553245 | ttCAGACACATAAAAAAACGTCATCGCTTGCATTAGAAAGGTTTCTGGCCGACCTTATAACTATTAATTACGAAGCGCAAAAGTAGTAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCAGTCAAAACt > 1:741020/1‑143 (MQ=255) ggttaacggcgtaaatggggaagaaacggtctaaataggctgatttaaggcatttacgggagaaaatatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa < 2:67259‑M2/4‑1 (MQ=255) cAGACACATAAAAAAACGTCATCGCTTGCATTAGAAAGGTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTaa < 1:396406/143‑1 (MQ=255) cAGACAAAGAAAAAAACGTCATCGCTTGAATTAGAAAGGTTTCTGCCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTaa < 2:248778/143‑1 (MQ=255) aGACACATAAAAAAACGTCATCGCTTGCATTAGAAAGGTTTCTGGAAGACCTTATAACCATTAATTACGAAGCGCAAAAAAAAAAGTATTTCCTCATTTTCCACAGTGAAGTGATTAAACATGCTGCTTCCACCAAAACTaaa > 2:638525/1‑142 (MQ=255) gACACATAAAAAACCGTCATCGCTTGCATTAGAAAGGTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAgg > 1:438287‑M2/1‑141 (MQ=255) acaTAAAAACAGTTCATCGCTTGCAGTAGAAAGGTTTCTGGCAGACTATATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaag > 2:211351‑M2/1‑138 (MQ=255) acaTAAAAAAACGTCATCGCTTGCATTAGAAAGGTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATTCTGATTCGGTCACAACTAAgcaag < 1:187102‑M2/143‑6 (MQ=255) gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaagatgaagaaatgaaatgactgagtcagccgcgaagaatttccccgcttattcgcaccttccCTACGTCGTcc > 1:853722‑M2/133‑143 (MQ=255) tAAAAAAACGTCATCGCTTGAATTAGAAAGGTATCTGGCCGACCTTATAACGATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCAACAGTGAAGTGAGTAACAATGCTGAATCAGGCAAAACTAAggaaggtg < 2:529835‑M2/143‑9 (MQ=255) cttaaatggcgaagaaacggtctaaataggctgattcaaggcattagcgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcacaccttccCTAAGACGTCCgg > 2:309187‑M2/131‑143 (MQ=255) caacaacggctaagacacggtctaaataggctgattccaggcagttacgggagaaaaaatcggctcaaacatgaacaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCgg < 2:597498‑M2/13‑1 (MQ=255) aataaaaCGTCATCGCTTGCATTAGAAAGGTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgc > 2:241136‑M2/1‑134 (MQ=255) taaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGtt < 1:885028‑M2/15‑1 (MQ=255) caaatggcgaagaaacgttctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagctttccctcgctttttcgcaccttccCTAAGTCGTCCGGtt < 1:697819‑M2/15‑1 (MQ=255) aaagggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTtc < 1:940804‑M2/16‑1 (MQ=255) aaaCGTCATCGCTTGCATTAGAAAGGTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaac < 2:177548‑M2/143‑14 (MQ=255) gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagacatgtacttatttagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTtcgactc < 1:638334‑M2/21‑1 (MQ=255) gcaaagaaacgggctacataggctgattcaaggcatttacgggggaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTtcgactc < 1:432874‑M2/21‑1 (MQ=255) gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTtcgactcga > 1:543845‑M2/121‑143 (MQ=255) cATCGCTTGTATTAGAAAGGTTTCTGGCCGACCTGATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtcc > 2:646669‑M2/1‑124 (MQ=255) aagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTtcgactcgac > 1:190847‑M2/120‑143 (MQ=255) aTCGCTTGCATTAGAAAGGTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccc < 1:731330‑M2/143‑21 (MQ=255) gCTTGCATTAGAAAGGTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACCGTGACGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctga > 1:41423‑M2/1‑120 (MQ=255) gCTTGCATTAGAAAGGTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctga > 1:848929‑M2/1‑120 (MQ=255) ttGCATTAGAAAGGTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgata > 1:20980‑M2/1‑118 (MQ=255) gCATTAGAGAGGTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatg > 2:378708‑M2/1‑116 (MQ=255) gctaaataggctgattcaaggcatgtacgggagaaaaagtcggctaaaacatgtagtaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTg < 2:352366‑M2/33‑1 (MQ=255) aGAAAGGTGTCTCGCCCACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatc > 2:591850‑M2/1‑111 (MQ=255) aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTc > 2:580539‑M2/107‑143 (MQ=255) aGGTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGAATAACTATGCTGATACAGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgt < 1:615930‑M2/143‑37 (MQ=255) ggctgagtcaaggcagttacgggagaaagtatcgtcgcgagcatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttatgcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGa < 2:759674‑M2/41‑1 (MQ=255) ggcagatccaaggcaagtacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGa < 1:344306‑M2/41‑1 (MQ=255) gTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgttt > 2:484933‑M2/1‑105 (MQ=255) tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGCCGTCCGGTTCGACTCCCCCATCGCGTCGTtcttgccgc > 2:474212‑M2/100‑139 (MQ=255) ggcgcaaggcatctacgggagaaacaatccgctcaaacatgaagaaatgaaaggactgagtcagccgagaagaattcccccgcttatccgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAgcgc < 1:164874‑M2/45‑1 (MQ=255) gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAgcgc < 1:887982‑M2/45‑1 (MQ=255) gCCGACCTTTTAACCATTTATTTCGAAGCGCAAAAAAAAGAACAGGCCCGCGTGTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct > 1:11171‑M2/1‑98 (MQ=255) aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGGCCGTCACGTCGTCCGTGAGCGCctgct > 2:115366‑M2/94‑143 (MQ=255) gACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCCCAGTGAAGTAATTCACTATGCTGATTCCGTCAAAAATAAggaaggtactaacaagtctctgatatgagatcaggtttgtcatagtca < 2:576302‑M2/143‑49 (MQ=255) gACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatctttgtcatctgca < 2:699746‑M2/143‑49 (MQ=255) ttaattaCGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg > 2:892621‑M2/1‑82 (MQ=255) taattaCCAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg > 2:293362‑M2/1‑81 (MQ=255) acatatcgactcaaacaggaataagtgatatgactgagtcagccgagaagaagttccccgcttattcgcactttccCTATGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGgcg < 2:605681‑M2/67‑1 (MQ=255) aaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACCCGCCCATACCGCGGTTCGTGAGCGCCTGCTGGCCAAACCTTCCcgcgcg > 2:321048‑M2/75‑143 (MQ=255) taCGAAGCGCAAAAAAAATAATATTTCCTCATTCTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca > 2:836509‑M2/1‑77 (MQ=255) gAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGCGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgggatgaagccccacatatgagatcatgattgtcatctggagccatagaacagggttcatca < 1:1007798‑M2/143‑70 (MQ=255) gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGTCGTGCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCCGGCTGCCCTTTCCGGCTCGaacaac > 1:141838‑M2/69‑143 (MQ=255) aGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGAATAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatgatgtttgtcagctggagccatagaacggggttcatcatg < 1:504998‑M2/143‑72 (MQ=255) aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTcc > 1:80130‑M2/65‑143 (MQ=255) aaaaaaTAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatcgaacagggttcaccatgagtcatc < 2:3865‑M2/143‑79 (MQ=255) tgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTg < 1:698532‑M2/84‑1 (MQ=255) gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTgg < 1:423047‑M2/85‑1 (MQ=255) aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGCCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTACCGGCGCGAACAACTTGCGGCtggg > 1:91130‑M2/58‑142 (MQ=255) agaaatgaagtgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGgcg < 2:549196‑M2/87‑1 (MQ=255) aaatgaaatgactgagtcagccgacaagaatctccccgcgtgttcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCt < 1:957385‑M2/89‑1 (MQ=255) atatTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacc > 2:337038‑M2/1‑57 (MQ=255) aggaaatgactgagtcagccgagaagagtttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGa < 2:182668‑M2/91‑1 (MQ=255) tttCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccatgatatgagatcatgtttgtcatctggagccatcgaacagcgttcatcatgagtcatcaacttacctac < 2:355147‑M2/143‑90 (MQ=255) ttCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtgcatcatgagtcatcaacttaccttcg < 2:8413‑M2/143‑91 (MQ=255) tgcctcATGTTCCGCAGTGAAGTGATTAACTATGCTGATTCCGTCAAACCTAAggaaggtgcgaacaagtccctgatatgatatcatgtttgtcatctggagccatagaacagggttcatcatgagtcataaacttaccttcg > 2:104205‑M2/3‑53 (MQ=255) aatgactgaggcagccgagaagaagagccccgcggatgcgcgcctgccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCAc < 1:12248‑M2/95‑1 (MQ=255) tgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGa < 1:288684‑M2/97‑1 (MQ=255) tgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTAACCGGGGCTAACAACTTCCGGCTGGCGCTGATCACGa < 2:559072‑M2/97‑1 (MQ=255) tgactgagtcagccgagaagaattcccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGa < 1:459952‑M2/97‑1 (MQ=255) tCCTTTTCCGCAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgcgatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga > 2:642319‑M2/1‑49 (MQ=255) tCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtatggcatctggagccatcgaacagggttcatcatgagtcatcaacttaccttcgccgacagtga < 2:249752‑M2/143‑101 (MQ=255) tcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGCCCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAAATTTCCGGCGCGAACAACTTCCGGCTGGCGCTGGTCACGAGAGCTGCg > 1:133531‑M2/39‑143 (MQ=255) acaGGGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatt > 1:1016300‑M2/1‑40 (MQ=255) agtgaagtgaTTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattca < 1:813904‑M2/143‑106 (MQ=255) tgcagtgaCTACCTATGCCGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagc > 1:134604‑M2/1‑36 (MQ=255) gaagtgaTTAAGTATGCTGGTTCCGTCAAGACTAAggaaggtgcgaacaagtcccggatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca > 2:261292‑M2/1‑35 (MQ=255) gaagtgaTTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca > 1:554414‑M2/1‑35 (MQ=255) gaagtaaTTAACTATGCTGATTCCGTCAAAACTAAggaaggcgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca > 1:285190‑M2/1‑35 (MQ=255) aagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGGTGGAGGGGCCACCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGa > 1:465944‑M2/30‑143 (MQ=255) tgaTTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagttaattcagcagtaa < 1:869442‑M2/143‑113 (MQ=255) gaTTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagccatctactgacgttcgccgacagtgaattcagcagtaag < 1:687062‑M2/143‑114 (MQ=255) atgagctattcTGATTCCGTCGAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcagcaacttaccttcgccgacagtgaattcagcagtaagc > 2:870963‑M2/6‑29 (MQ=255) tccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAGacca < 1:571055‑M2/121‑1 (MQ=255) ccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACACCTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAGACGAccc > 1:608787‑M2/20‑143 (MQ=255) gtgCTGACTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtca > 1:304537‑M2/2‑22 (MQ=255) aTGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaggcgccctca > 1:115400‑M2/1‑22 (MQ=255) attcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAGACCACCCTCAttt > 2:705479‑M2/14‑143 (MQ=255) gcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAGACCACCCTCATTTCCCa < 2:543845‑M2/134‑1 (MQ=255) gcaccttccCGAACTCGCCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAGACCACCCTCATTTCCCa < 2:708413‑M2/134‑1 (MQ=255) acaacaaactaaggaagttgcgaacaagtcccggatatgggatcatgtttgtcatctggagccatagaacagggttcatcatgagacatcgacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaa > 2:400671‑M2/6‑12 (MQ=255) gTCAAAACTAAcgaatgtgcgaacaagtccctgatatcagatcatgtttgtcatctggagccatagaacagtgttcatcatcagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaag > 1:67319‑M2/1‑11 (MQ=255) tCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaaga < 1:870813‑M2/143‑134 (MQ=255) tCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaaccgccgccacgccagaaacga < 2:111290‑M2/143‑134 (MQ=255) cacagactaaggaagttgcgaacaaggcccggacacgagatcatgtctgtcatctggagccagagaccagggttcatcatgaggcatcaacttaccgtcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaaga > 1:336008‑M2/6‑10 (MQ=255) aacaaactaAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaaga > 2:139337‑M2/4‑10 (MQ=255) aacaaactaAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcaccaacttaccttctccgacagtgaattcagcagtaagcgccgtcagaccagaaaaga > 1:522489‑M2/4‑10 (MQ=255) cAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagag > 1:355589‑M2/1‑9 (MQ=255) aaaaCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt > 2:591894‑M2/1‑8 (MQ=255) gccCGAAGTCGGCCGGGGCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAGACCACCCTCATTTCCCAGTGggc < 1:954188‑M2/140‑1 (MQ=255) aCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattccgcagtaagcgccgtcagaccagagaagagattt < 1:417978‑M2/143‑139 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt < 1:117171‑M2/143‑140 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt > 2:607984‑M2/1‑4 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt > 1:447787‑M2/1‑4 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcagctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt > 1:412443‑M2/1‑4 (MQ=255) | TTCAGACACATAAAAAAACGTCATCGCTTGCATTAGAAAGGTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAGACCACCCTCATTTCCCAGTGGGCGGC > NC_000913/3552962‑3553245 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |