Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,553,103 IS5 (+) +4 bp coding (19‑22/2706 nt) malT → mal regulon transcriptional activator

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2288919 =NA (NA)49 (0.870) 38/284 0.5 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 3553103 = 0 (0.000)coding (19/2706 nt) malT mal regulon transcriptional activator
* ? NC_000913 = 2290113NA (NA)81 (1.450) 49/282 0.1 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 3553106 0 (0.000)coding (22/2706 nt) malT mal regulon transcriptional activator

Only 100 of 121 total aligned reads displayed.

TTCAGACACATAAAAAAACGTCATCGCTTGCATTAGAAAGGTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAGACCACCCTCATTTCCCAGTGGGCGGC  >  NC_000913/3552962‑3553245
                                                                                                                                             |                                                                                                                                              
ttCAGACACATAAAAAAACGTCATCGCTTGCATTAGAAAGGTTTCTGGCCGACCTTATAACTATTAATTACGAAGCGCAAAAGTAGTAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCAGTCAAAACt                                                                                                                                               >  1:741020/1‑143 (MQ=255)
  ggttaacggcgtaaatggggaagaaacggtctaaataggctgatttaaggcatttacgggagaaaatatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                                                             <  2:67259‑M2/4‑1 (MQ=255)
  cAGACACATAAAAAAACGTCATCGCTTGCATTAGAAAGGTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTaa                                                                                                                                             <  1:396406/143‑1 (MQ=255)
  cAGACAAAGAAAAAAACGTCATCGCTTGAATTAGAAAGGTTTCTGCCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTaa                                                                                                                                             <  2:248778/143‑1 (MQ=255)
   aGACACATAAAAAAACGTCATCGCTTGCATTAGAAAGGTTTCTGGAAGACCTTATAACCATTAATTACGAAGCGCAAAAAAAAAAGTATTTCCTCATTTTCCACAGTGAAGTGATTAAACATGCTGCTTCCACCAAAACTaaa                                                                                                                                            >  2:638525/1‑142 (MQ=255)
    gACACATAAAAAACCGTCATCGCTTGCATTAGAAAGGTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAgg                                                                                                                                           >  1:438287‑M2/1‑141 (MQ=255)
       acaTAAAAACAGTTCATCGCTTGCAGTAGAAAGGTTTCTGGCAGACTATATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaag                                                                                                                                        >  2:211351‑M2/1‑138 (MQ=255)
       acaTAAAAAAACGTCATCGCTTGCATTAGAAAGGTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATTCTGATTCGGTCACAACTAAgcaag                                                                                                                                        <  1:187102‑M2/143‑6 (MQ=255)
         gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaagatgaagaaatgaaatgactgagtcagccgcgaagaatttccccgcttattcgcaccttccCTACGTCGTcc                                                                                                                                      >  1:853722‑M2/133‑143 (MQ=255)
          tAAAAAAACGTCATCGCTTGAATTAGAAAGGTATCTGGCCGACCTTATAACGATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCAACAGTGAAGTGAGTAACAATGCTGAATCAGGCAAAACTAAggaaggtg                                                                                                                                     <  2:529835‑M2/143‑9 (MQ=255)
           cttaaatggcgaagaaacggtctaaataggctgattcaaggcattagcgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcacaccttccCTAAGACGTCCgg                                                                                                                                    >  2:309187‑M2/131‑143 (MQ=255)
           caacaacggctaagacacggtctaaataggctgattccaggcagttacgggagaaaaaatcggctcaaacatgaacaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCgg                                                                                                                                    <  2:597498‑M2/13‑1 (MQ=255)
           aataaaaCGTCATCGCTTGCATTAGAAAGGTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgc                                                                                                                                    >  2:241136‑M2/1‑134 (MQ=255)
             taaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGtt                                                                                                                                  <  1:885028‑M2/15‑1 (MQ=255)
             caaatggcgaagaaacgttctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagctttccctcgctttttcgcaccttccCTAAGTCGTCCGGtt                                                                                                                                  <  1:697819‑M2/15‑1 (MQ=255)
              aaagggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTtc                                                                                                                                 <  1:940804‑M2/16‑1 (MQ=255)
               aaaCGTCATCGCTTGCATTAGAAAGGTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaac                                                                                                                                <  2:177548‑M2/143‑14 (MQ=255)
                   gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagacatgtacttatttagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTtcgactc                                                                                                                            <  1:638334‑M2/21‑1 (MQ=255)
                   gcaaagaaacgggctacataggctgattcaaggcatttacgggggaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTtcgactc                                                                                                                            <  1:432874‑M2/21‑1 (MQ=255)
                     gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTtcgactcga                                                                                                                          >  1:543845‑M2/121‑143 (MQ=255)
                     cATCGCTTGTATTAGAAAGGTTTCTGGCCGACCTGATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtcc                                                                                                                          >  2:646669‑M2/1‑124 (MQ=255)
                      aagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTtcgactcgac                                                                                                                         >  1:190847‑M2/120‑143 (MQ=255)
                      aTCGCTTGCATTAGAAAGGTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccc                                                                                                                         <  1:731330‑M2/143‑21 (MQ=255)
                         gCTTGCATTAGAAAGGTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACCGTGACGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctga                                                                                                                      >  1:41423‑M2/1‑120 (MQ=255)
                         gCTTGCATTAGAAAGGTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctga                                                                                                                      >  1:848929‑M2/1‑120 (MQ=255)
                           ttGCATTAGAAAGGTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgata                                                                                                                    >  1:20980‑M2/1‑118 (MQ=255)
                             gCATTAGAGAGGTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatg                                                                                                                  >  2:378708‑M2/1‑116 (MQ=255)
                               gctaaataggctgattcaaggcatgtacgggagaaaaagtcggctaaaacatgtagtaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTg                                                                                                                <  2:352366‑M2/33‑1 (MQ=255)
                                  aGAAAGGTGTCTCGCCCACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatc                                                                                                             >  2:591850‑M2/1‑111 (MQ=255)
                                   aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTc                                                                                                            >  2:580539‑M2/107‑143 (MQ=255)
                                      aGGTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGAATAACTATGCTGATACAGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgt                                                                                                         <  1:615930‑M2/143‑37 (MQ=255)
                                       ggctgagtcaaggcagttacgggagaaagtatcgtcgcgagcatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttatgcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGa                                                                                                        <  2:759674‑M2/41‑1 (MQ=255)
                                       ggcagatccaaggcaagtacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGa                                                                                                        <  1:344306‑M2/41‑1 (MQ=255)
                                        gTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                       >  2:484933‑M2/1‑105 (MQ=255)
                                          tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGCCGTCCGGTTCGACTCCCCCATCGCGTCGTtcttgccgc                                                                                                     >  2:474212‑M2/100‑139 (MQ=255)
                                           ggcgcaaggcatctacgggagaaacaatccgctcaaacatgaagaaatgaaaggactgagtcagccgagaagaattcccccgcttatccgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAgcgc                                                                                                    <  1:164874‑M2/45‑1 (MQ=255)
                                           gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAgcgc                                                                                                    <  1:887982‑M2/45‑1 (MQ=255)
                                               gCCGACCTTTTAACCATTTATTTCGAAGCGCAAAAAAAAGAACAGGCCCGCGTGTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct                                                                                                >  1:11171‑M2/1‑98 (MQ=255)
                                                aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGGCCGTCACGTCGTCCGTGAGCGCctgct                                                                                               >  2:115366‑M2/94‑143 (MQ=255)
                                                  gACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCCCAGTGAAGTAATTCACTATGCTGATTCCGTCAAAAATAAggaaggtactaacaagtctctgatatgagatcaggtttgtcatagtca                                                                                             <  2:576302‑M2/143‑49 (MQ=255)
                                                  gACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatctttgtcatctgca                                                                                             <  2:699746‑M2/143‑49 (MQ=255)
                                                               ttaattaCGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg                                                                                >  2:892621‑M2/1‑82 (MQ=255)
                                                                taattaCCAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg                                                                               >  2:293362‑M2/1‑81 (MQ=255)
                                                                 acatatcgactcaaacaggaataagtgatatgactgagtcagccgagaagaagttccccgcttattcgcactttccCTATGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGgcg                                                                              <  2:605681‑M2/67‑1 (MQ=255)
                                                                   aaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACCCGCCCATACCGCGGTTCGTGAGCGCCTGCTGGCCAAACCTTCCcgcgcg                                                                            >  2:321048‑M2/75‑143 (MQ=255)
                                                                    taCGAAGCGCAAAAAAAATAATATTTCCTCATTCTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca                                                                           >  2:836509‑M2/1‑77 (MQ=255)
                                                                       gAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGCGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgggatgaagccccacatatgagatcatgattgtcatctggagccatagaacagggttcatca                                                                        <  1:1007798‑M2/143‑70 (MQ=255)
                                                                         gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGTCGTGCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCCGGCTGCCCTTTCCGGCTCGaacaac                                                                      >  1:141838‑M2/69‑143 (MQ=255)
                                                                         aGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGAATAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatgatgtttgtcagctggagccatagaacggggttcatcatg                                                                      <  1:504998‑M2/143‑72 (MQ=255)
                                                                             aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTcc                                                                  >  1:80130‑M2/65‑143 (MQ=255)
                                                                                aaaaaaTAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatcgaacagggttcaccatgagtcatc                                                               <  2:3865‑M2/143‑79 (MQ=255)
                                                                                  tgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTg                                                             <  1:698532‑M2/84‑1 (MQ=255)
                                                                                   gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTgg                                                            <  1:423047‑M2/85‑1 (MQ=255)
                                                                                    aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGCCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTACCGGCGCGAACAACTTGCGGCtggg                                                           >  1:91130‑M2/58‑142 (MQ=255)
                                                                                     agaaatgaagtgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGgcg                                                          <  2:549196‑M2/87‑1 (MQ=255)
                                                                                       aaatgaaatgactgagtcagccgacaagaatctccccgcgtgttcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCt                                                        <  1:957385‑M2/89‑1 (MQ=255)
                                                                                        atatTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacc                                                       >  2:337038‑M2/1‑57 (MQ=255)
                                                                                         aggaaatgactgagtcagccgagaagagtttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGa                                                      <  2:182668‑M2/91‑1 (MQ=255)
                                                                                           tttCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccatgatatgagatcatgtttgtcatctggagccatcgaacagcgttcatcatgagtcatcaacttacctac                                                    <  2:355147‑M2/143‑90 (MQ=255)
                                                                                            ttCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtgcatcatgagtcatcaacttaccttcg                                                   <  2:8413‑M2/143‑91 (MQ=255)
                                                                                            tgcctcATGTTCCGCAGTGAAGTGATTAACTATGCTGATTCCGTCAAACCTAAggaaggtgcgaacaagtccctgatatgatatcatgtttgtcatctggagccatagaacagggttcatcatgagtcataaacttaccttcg                                                   >  2:104205‑M2/3‑53 (MQ=255)
                                                                                             aatgactgaggcagccgagaagaagagccccgcggatgcgcgcctgccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCAc                                                  <  1:12248‑M2/95‑1 (MQ=255)
                                                                                               tgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGa                                                <  1:288684‑M2/97‑1 (MQ=255)
                                                                                               tgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTAACCGGGGCTAACAACTTCCGGCTGGCGCTGATCACGa                                                <  2:559072‑M2/97‑1 (MQ=255)
                                                                                               tgactgagtcagccgagaagaattcccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGa                                                <  1:459952‑M2/97‑1 (MQ=255)
                                                                                                tCCTTTTCCGCAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgcgatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga                                               >  2:642319‑M2/1‑49 (MQ=255)
                                                                                                      tCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtatggcatctggagccatcgaacagggttcatcatgagtcatcaacttaccttcgccgacagtga                                         <  2:249752‑M2/143‑101 (MQ=255)
                                                                                                       tcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGCCCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAAATTTCCGGCGCGAACAACTTCCGGCTGGCGCTGGTCACGAGAGCTGCg                                        >  1:133531‑M2/39‑143 (MQ=255)
                                                                                                         acaGGGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatt                                      >  1:1016300‑M2/1‑40 (MQ=255)
                                                                                                           agtgaagtgaTTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattca                                    <  1:813904‑M2/143‑106 (MQ=255)
                                                                                                             tgcagtgaCTACCTATGCCGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagc                                  >  1:134604‑M2/1‑36 (MQ=255)
                                                                                                              gaagtgaTTAAGTATGCTGGTTCCGTCAAGACTAAggaaggtgcgaacaagtcccggatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca                                 >  2:261292‑M2/1‑35 (MQ=255)
                                                                                                              gaagtgaTTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca                                 >  1:554414‑M2/1‑35 (MQ=255)
                                                                                                              gaagtaaTTAACTATGCTGATTCCGTCAAAACTAAggaaggcgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca                                 >  1:285190‑M2/1‑35 (MQ=255)
                                                                                                                aagaatttccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGGTGGAGGGGCCACCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGa                               >  1:465944‑M2/30‑143 (MQ=255)
                                                                                                                  tgaTTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagttaattcagcagtaa                             <  1:869442‑M2/143‑113 (MQ=255)
                                                                                                                   gaTTAACTATGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagccatctactgacgttcgccgacagtgaattcagcagtaag                            <  1:687062‑M2/143‑114 (MQ=255)
                                                                                                                    atgagctattcTGATTCCGTCGAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcagcaacttaccttcgccgacagtgaattcagcagtaagc                           >  2:870963‑M2/6‑29 (MQ=255)
                                                                                                                       tccccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAGacca                        <  1:571055‑M2/121‑1 (MQ=255)
                                                                                                                          ccgcttattcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACACCTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAGACGAccc                     >  1:608787‑M2/20‑143 (MQ=255)
                                                                                                                           gtgCTGACTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtca                    >  1:304537‑M2/2‑22 (MQ=255)
                                                                                                                           aTGCTGATTCCGTCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaggcgccctca                    >  1:115400‑M2/1‑22 (MQ=255)
                                                                                                                                attcgcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAGACCACCCTCAttt               >  2:705479‑M2/14‑143 (MQ=255)
                                                                                                                                    gcaccttccCTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAGACCACCCTCATTTCCCa           <  2:543845‑M2/134‑1 (MQ=255)
                                                                                                                                    gcaccttccCGAACTCGCCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAGACCACCCTCATTTCCCa           <  2:708413‑M2/134‑1 (MQ=255)
                                                                                                                                     acaacaaactaaggaagttgcgaacaagtcccggatatgggatcatgtttgtcatctggagccatagaacagggttcatcatgagacatcgacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaa          >  2:400671‑M2/6‑12 (MQ=255)
                                                                                                                                      gTCAAAACTAAcgaatgtgcgaacaagtccctgatatcagatcatgtttgtcatctggagccatagaacagtgttcatcatcagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaag         >  1:67319‑M2/1‑11 (MQ=255)
                                                                                                                                       tCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaaga        <  1:870813‑M2/143‑134 (MQ=255)
                                                                                                                                       tCAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaaccgccgccacgccagaaacga        <  2:111290‑M2/143‑134 (MQ=255)
                                                                                                                                       cacagactaaggaagttgcgaacaaggcccggacacgagatcatgtctgtcatctggagccagagaccagggttcatcatgaggcatcaacttaccgtcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaaga        >  1:336008‑M2/6‑10 (MQ=255)
                                                                                                                                       aacaaactaAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaaga        >  2:139337‑M2/4‑10 (MQ=255)
                                                                                                                                       aacaaactaAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcaccaacttaccttctccgacagtgaattcagcagtaagcgccgtcagaccagaaaaga        >  1:522489‑M2/4‑10 (MQ=255)
                                                                                                                                        cAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagag       >  1:355589‑M2/1‑9 (MQ=255)
                                                                                                                                         aaaaCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt                                           >  2:591894‑M2/1‑8 (MQ=255)
                                                                                                                                          gccCGAAGTCGGCCGGGGCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAGACCACCCTCATTTCCCAGTGggc     <  1:954188‑M2/140‑1 (MQ=255)
                                                                                                                                            aCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattccgcagtaagcgccgtcagaccagagaagagattt   <  1:417978‑M2/143‑139 (MQ=255)
                                                                                                                                             cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt  <  1:117171‑M2/143‑140 (MQ=255)
                                                                                                                                             cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt  >  2:607984‑M2/1‑4 (MQ=255)
                                                                                                                                             cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt  >  1:447787‑M2/1‑4 (MQ=255)
                                                                                                                                             cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcagctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt  >  1:412443‑M2/1‑4 (MQ=255)
                                                                                                                                             |                                                                                                                                              
TTCAGACACATAAAAAAACGTCATCGCTTGCATTAGAAAGGTTTCTGGCCGACCTTATAACCATTAATTACGAAGCGCAAAAAAAATAATATTTCCTCATTTTCCACAGTGAAGTGATTAACTATGCTGATTCCGTCAAAACTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAGACCACCCTCATTTCCCAGTGGGCGGC  >  NC_000913/3552962‑3553245

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.