Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 3,815,859 Δ82 bp [rph][rph] [rph], [rph]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3815859 3815940 82 68 [0] [0] 69 [rph]–[rph] [rph],[rph]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 38158580 (0.000)67 (1.130) 60/264 0.0 100% pseudogene (24/48 nt) rph ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH
?NC_000913 3815941 = 0 (0.000)pseudogene (609/669 nt) rph ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH

CAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTT  >  NC_000913/3815800‑3816083
                                                                                                                                             |                                                                                                                                              
cacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatccgtcgccttaaaaatcagtttgccctcgccgccgtctgcCg                                                                                                                                               >  1:862928‑M2/142‑143 (MQ=255)
  cctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTc                                                                                                                                             >  1:410766‑M2/140‑143 (MQ=255)
    tgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTccc                                                                                                                                           <  1:801222‑M2/6‑1 (MQ=255)
    tgcttgcgaagcgcaaattcaataacctggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaagaaaggcgtctcatcagtcgccttaaaaagcagtttgccagcgccgccttctgcCGTccc                                                                                                                                           <  1:701385‑M2/6‑1 (MQ=255)
      cttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccgtaaaaatcagtttgccagcgccgccttctgcCGTCCCCt                                                                                                                                         >  1:802667‑M2/136‑143 (MQ=255)
         gctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCa                                                                                                                                      <  1:691771‑M2/11‑1 (MQ=255)
           taagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACt                                                                                                                                    >  1:290588‑M2/131‑143 (MQ=255)
              tcgcaagtccaataaacgtgcgctgatatggcttcatgccatcgctactgttgtgacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCa                                                                                                                                 <  2:1119434‑M2/16‑1 (MQ=255)
               cgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCaa                                                                                                                                >  2:912809‑M2/127‑143 (MQ=255)
               cgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctaaagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagttggccaccgcagccttctgcCGTCACATGCCCTCCaa                                                                                                                                >  1:95497‑M2/127‑143 (MQ=255)
                 cacattcaataaacaagcggtgagatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAatg                                                                                                                              <  1:474834‑M2/19‑1 (MQ=255)
                   aattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaacgcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAatgat                                                                                                                            <  2:258713‑M2/21‑1 (MQ=255)
                       caatacactggcgctggtatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATgcgc                                                                                                                        <  2:1077159‑M2/25‑1 (MQ=255)
                       caataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATgcgc                                                                                                                        <  1:949477‑M2/25‑1 (MQ=255)
                                ggcgctgatatggtttcctgccttccctcctcatcttactttgctacaaacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCg                                                                                                               <  1:156900‑M2/34‑1 (MQ=255)
                                ggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACCTCCATGATGCGCCCGTCTTCg                                                                                                               >  2:86163‑M2/110‑143 (MQ=255)
                                       atatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtcatca                                                                                                        <  2:936358‑M2/41‑1 (MQ=255)
                                         atggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgcctcatcaggcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCACGTCTTCGGTCACCACt                                                                                                      >  2:712683‑M2/101‑143 (MQ=255)
                                           ggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGGCACCACTAc                                                                                                    >  1:179538‑M2/99‑143 (MQ=255)
                                            tttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCCTCACTACg                                                                                                   >  1:751628‑M2/98‑143 (MQ=255)
                                            gtgtcatgccttctcccctcatcttagtttcctacagacaaaaacaaggcgactcatcagtcgccttaaaaagcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACg                                                                                                   <  1:861603‑M2/46‑1 (MQ=255)
                                              ttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTACCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTAAGtt                                                                                                 >  1:302512‑M2/96‑143 (MQ=255)
                                              ttcatgccctcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtgtgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGtt                                                                                                 <  1:1108491‑M2/48‑1 (MQ=255)
                                               tcatgccttcgctcctcatctcacttttctacagaaaaaaaaaaggagtctcttgcaccgcctgaaaactcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTc                                                                                                <  1:530890‑M2/49‑1 (MQ=255)
                                                catgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTGCa                                                                                               >  1:63934‑M2/94‑143 (MQ=255)
                                                  tgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGACGCGCCCGTCTGCGGTCATCACTCCGTCCatc                                                                                             >  1:473645‑M2/92‑142 (MQ=255)
                                                     ccttcgctcctcatcttccttttctacagccaaaaacaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGTGCCCGTCTTCGGTCATCACTACGTTCATGTCg                                                                                          <  2:605122‑M2/55‑1 (MQ=255)
                                                       tcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGt                                                                                        <  1:559637‑M2/57‑1 (MQ=255)
                                                         gctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCCCTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGtct                                                                                      >  1:925990‑M2/85‑143 (MQ=255)
                                                            gctcttcgtattttcctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTg                                                                                   <  2:330434‑M2/62‑1 (MQ=255)
                                                             ctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgctttctacCGTCCCCTGCACTTCAATGATGCTCCCGTCTTCGGTCATCACTACGTTAATTTCGGTCTCTGc                                                                                  >  1:442911‑M2/81‑143 (MQ=255)
                                                                atcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGCCTTCGGTCATCACTACCTTCCTGTCGGTCTCTgcgtc                                                                               >  1:759488‑M2/78‑141 (MQ=255)
                                                                     acttatctacagacaaaaaaaaggcgacgcatcagtcgccttaacaatcagtttgccagcgccgccttctgcCGTCCCCTGCACCTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGt                                                                          <  1:258956‑M2/71‑1 (MQ=255)
                                                                        tttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttcggcCGTCCCCTGCACTTCAATGATGCGCCCGGCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCtt                                                                       <  2:118182‑M2/74‑1 (MQ=255)
                                                                           ctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatccgtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCCTCGGTCATCACTACGTTCATGTCGGTCTCTCCGGCAGAgtcttaca                                                                    >  2:1092727‑M2/67‑140 (MQ=255)
                                                                           ctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCaa                                                                    <  1:1038588‑M2/77‑1 (MQ=255)
                                                                            tccaggcaaaaaataggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAAc                                                                   <  2:478835‑M2/78‑1 (MQ=255)
                                                                             acagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGGCTTAAACg                                                                  >  1:444582‑M2/65‑143 (MQ=255)
                                                                                gacaaaaaaaaggcgactcatcaggcgcctcaaaaatcagtttgccagcgcccccttcctcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCAATACGTTCATGGCGGGCTCTGCGGCAGAGTCTTCAACGTAt                                                               <  2:565812‑M2/82‑1 (MQ=255)
                                                                                  caaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTc                                                             <  1:912809‑M2/84‑1 (MQ=255)
                                                                                   aaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTGCGACGTATTcc                                                            >  2:1089151‑M2/59‑143 (MQ=255)
                                                                                    aaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCCACGTATTCCa                                                           >  1:1011243‑M2/58‑143 (MQ=255)
                                                                                      aaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGGGGCTTCAACGTAGTCCAGa                                                         >  1:808410‑M2/56‑143 (MQ=255)
                                                                                           ggcgactgatgagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCa                                                    >  1:943491‑M2/51‑143 (MQ=255)
                                                                                            gcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCaa                                                   >  1:91358‑M2/50‑143 (MQ=255)
                                                                                             cgccccatccgtcgccttaaaaatcagttggccagcgccgccttctgcCGTCCCCTGCCCTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCaaa                                                  <  1:104479‑M2/95‑1 (MQ=255)
                                                                                             cgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCaaa                                                  <  1:326087‑M2/95‑1 (MQ=255)
                                                                                             cgacccatcaggcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCaaa                                                  <  2:444742‑M2/95‑1 (MQ=255)
                                                                                              gactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCCCTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTGTTCCAGATCgcaacc                                                 >  2:454765‑M2/48‑141 (MQ=255)
                                                                                                  catcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGCTCGCAAACCGCt                                             >  2:53394‑M2/44‑143 (MQ=255)
                                                                                                   atcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTTCGGCAGCGTCTTCAACGTATTCCAGATCGCAAACCGCtt                                            >  1:1104893‑M2/43‑143 (MQ=255)
                                                                                                       gtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGcc                                        >  2:1027192‑M2/39‑143 (MQ=255)
                                                                                                       gtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGcc                                        <  1:118140‑M2/105‑1 (MQ=255)
                                                                                                             ttacacatcagtttgcccgcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTcac                                  <  2:728032‑M2/111‑1 (MQ=255)
                                                                                                             ttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCCTCACTACGTCCATGCCGGTCTCTGCGGCAGAGTCCTCGACGCATGACGGCTCGCAAGCCGCGTCGCCGTCcac                                  >  2:169026‑M2/33‑143 (MQ=255)
                                                                                                              taaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTCTTCCAGATCGCAAACCGCTTCGCCGTTccca                                 >  2:1072385‑M2/32‑143 (MQ=255)
                                                                                                               aaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACaa                                >  1:723256‑M2/31‑143 (MQ=255)
                                                                                                                  aatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTGGGTCATCACTACGTTCATTTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTc                             <  1:824853‑M2/116‑1 (MQ=255)
                                                                                                                  aatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTc                             >  1:671758‑M2/28‑143 (MQ=255)
                                                                                                                    tcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCCCCGTTCCCAATCCCg                           >  2:692808‑M2/26‑143 (MQ=255)
                                                                                                                     cagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATATCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGa                          <  2:576324‑M2/119‑1 (MQ=255)
                                                                                                                     caggttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGa                          <  1:338060‑M2/119‑1 (MQ=255)
                                                                                                                        tttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCAAGATCGCAAACCGCTTCGCCGTTCGCAATTCCCACAg                       >  2:83340‑M2/22‑143 (MQ=255)
                                                                                                                          tgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCCCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGaa                     <  1:836788‑M2/124‑1 (MQ=255)
                                                                                                                            ccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCCGCTCCTAAACCGCTTCGCCGTTCACAATTCCCACagaacc                   >  2:810466‑M2/18‑141 (MQ=255)
                                                                                                                            ccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGCCATCACTACGTTCATGTCGGTCTCTGCCGCAGAGTCTTCAACGCATTCCAGATCGCACACCGCTCCGCCGTTCACCACTCCGAcagaccc                   >  2:376024‑M2/18‑140 (MQ=255)
                                                                                                                                 gccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACCCTTCCGACAGCACCTGCgg              >  1:475025‑M2/13‑143 (MQ=255)
                                                                                                                                   cgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAGTTCCGACAGAAACTGCGgcc            >  1:407343‑M2/11‑142 (MQ=255)
                                                                                                                                             cGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCtt  <  1:433780/143‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                              
CAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTT  >  NC_000913/3815800‑3816083

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: