Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 4,049,913 IS2 (–) +5 bp noncoding (15‑19/109 nt) spf → Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4049913 =1 (0.020)71 (1.340) 50/284 0.1 98.6% noncoding (15/109 nt) spf Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent
?NC_000913 4498181 = NA (NA)noncoding (1/1331 nt) IS2 repeat region
* ? NC_000913 = 40499170 (0.000)71 (1.360) 58/280 0.0 100% noncoding (19/109 nt) spf Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent
?NC_000913 = 4499511 NA (NA)noncoding (1331/1331 nt) IS2 repeat region

GCAGGGGGGATTATCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAG  >  NC_000913/4498039‑4498319
                                                                                                                                               |                                                                                                                                          
gCAGGGGGGATTATCAGAATCCGCGGTTATTCATTATTTATATACATTCACTAAACAAGGAACCTCATAAAAAATACTGTACTCATAGGGTGATGCGGGATAACTGACGGAAGGAGTGCTGCAGGGTGTTGATGGTCGCTTGt                                                                                                                                            >  2:138817/1‑143 (MQ=255)
 ctgtgtggATTATCAGAATCCGAGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATATAAAAGCCTGTACTTACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGACTTGATGGTCCCTTGTa                                                                                                                                           <  1:731736/137‑1 (MQ=255)
    gggggATTATCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGAc                                                                                                                                        <  1:893326/143‑1 (MQ=255)
      gggATTATCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTg                                                                                                                                      <  1:438377/143‑1 (MQ=255)
           tATCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGAGCGGcccc                                                                                                                                 >  2:858793/1‑143 (MQ=255)
           tATCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGcccc                                                                                                                                 <  1:686234/143‑1 (MQ=255)
             tCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGCGTGCTGCAGGGCTTTGATGGTCCCTTGTAAACTGGCCCCCt                                                                                                                               >  2:148581/1‑143 (MQ=255)
              cAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTg                                                                                                                              <  2:511536/143‑1 (MQ=255)
               aGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGa                                                                                                                             <  1:890142/143‑1 (MQ=255)
                taaTCCGTGGTTATTCATTATTTATATACATTTAATAAAAAAGTAACCTCATAAAAAATCCTGTATTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGaa                                                                                                                            <  2:132253/142‑1 (MQ=255)
                gAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGaa                                                                                                                            <  2:90357/143‑1 (MQ=255)
                 aaTCGGTGGTTAGTTATTATTTCTATACATTCAATAAGAAAGTAACCTCATAAAAAGTCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTACACTGGCCCCCTGAAt                                                                                                                           <  2:804562/143‑1 (MQ=255)
                     cgtcgTTATTCATTATTTATATTCATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTTCTCACAGGGTGATGCGGGATAACTGACGTAAGTAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAAtttcg                                                                                                                       <  2:555716/139‑2 (MQ=255)
                     cgcgGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTcc                                                                                                                       <  2:115408/143‑1 (MQ=255)
                     cgcgGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTcc                                                                                                                       <  1:231346/143‑1 (MQ=255)
                      gcgGTTATTCATTATTTATATAAATTCCATAAAAAAGTAACCTCATAAAAACATCCGGCGTCATAATCAAAAGATAGATAAGTGACGTAAGGAGTGCGGCAGGGGTTTGATGGTGCCTTGTAGACTGGCCCCCTGAATCTCCa                                                                                                                      >  2:678168/1‑143 (MQ=255)
                       cgGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAg                                                                                                                     <  1:555395/143‑1 (MQ=255)
                        ggTTATTCATTATTTCTCTACCTTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGa                                                                                                                    <  2:619129/143‑1 (MQ=255)
                            aTTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAGAATCCTGTACTCACAGGGTGATGAGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAAc                                                                                                                >  2:120971/1‑143 (MQ=255)
                             ttCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCCGACAAcc                                                                                                               >  1:624680/1‑143 (MQ=255)
                               cATTATTTCTAGACATTCAATAAAAAAGTAACCTCATAATAAATCCTGTACTCACAGGGTGATGCGGGATAACTGTCGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCaa                                                                                                             <  1:299773/143‑1 (MQ=255)
                               cATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCaa                                                                                                             <  1:626884/143‑1 (MQ=255)
                                        tataCATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTa                                                                                                    >  1:810962/1‑143 (MQ=255)
                                          taCATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTaaa                                                                                                  >  2:674297/1‑143 (MQ=255)
                                           aCATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATACGGGATAACTGACATAAGGACTGCTCCAGGCATTAGATGGTCCCTTGTCGACTGCCCCCCTGCATCTCCACACAACCACTACCACTTactt                                                                                                 >  2:174534/1‑140 (MQ=255)
                                           aCATCCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAAt                                                                                                 <  1:781984/143‑1 (MQ=255)
                                              ttCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATATCCAGACAACCAATATCACTTAAATAAg                                                                                              >  2:454885/1‑143 (MQ=255)
                                               tCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGt                                                                                             <  1:672929/143‑1 (MQ=255)
                                                   tAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATa                                                                                         <  2:51947/143‑1 (MQ=255)
                                                   tAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATa                                                                                         <  1:169672/143‑1 (MQ=255)
                                                    aaaaaaGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAACTAAGTGATAg                                                                                        >  2:442999/1‑143 (MQ=255)
                                                     aaaaaGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTATTTAAGTGATatt                                                                                       <  2:13601/143‑3 (MQ=255)
                                                          gTAACCTGATAAAAAAGCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTaa                                                                                  <  1:581077/143‑1 (MQ=255)
                                                                   tAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGttt                                                                         <  1:674297/143‑1 (MQ=255)
                                                                    aaaaaaTCCTGTACGCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGtttt                                                                        <  2:312612/143‑1 (MQ=255)
                                                                     aattgaTCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGtttt                                                                        <  1:170366/138‑1 (MQ=255)
                                                                     aaaaaTCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGttttt                                                                       >  2:216881/1‑143 (MQ=255)
                                                                     aaaaaTCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGttttt                                                                       <  1:40075/143‑1 (MQ=255)
                                                                      aaaaTCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTa                                                                      <  2:630536/143‑1 (MQ=255)
                                                                      aaaaTCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTa                                                                      <  1:300316/143‑1 (MQ=255)
                                                                            ccTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTa                                                                 <  2:375883/143‑1 (MQ=255)
                                                                               gTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGta                                                              >  2:342991/1‑142 (MQ=255)
                                                                                   tCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTg                                                          <  1:317481/143‑1 (MQ=255)
                                                                                     acaGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGga                                                        <  2:750416/143‑1 (MQ=255)
                                                                                         ggTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGACTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATACCACCCCAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGgagacc                                                    >  1:215877/1‑141 (MQ=21)
                                                                                                 gtgttcaCTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTACTTTTTAGACTAGTCATTGGAGAACAGAtgatt                                            <  2:498799/137‑1 (MQ=255)
                                                                                                  ggATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGAtgattg                                           >  1:299182/1‑143 (MQ=255)
                                                                                                    agaaCTGGCGTAAGGGGTGCTGCAGGGATTTGATGGTCCCTGGTAGACTGGCCCCCTGAATCTCCAGAGAATCTATATCACTTAAATAAGTGATAGTCTTAATACGAGTTTTTAGACTAGTCATTGGAGAACAGAtgattggt                                         <  2:72434/141‑3 (MQ=17)
                                                                                                    aTAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGAtgattgat                                         <  1:485430/143‑1 (MQ=255)
                                                                                                    aTAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGAtgattgat                                         <  2:917115/143‑1 (MQ=255)
                                                                                                    aTAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGAtgattgat                                         <  1:580058/143‑1 (MQ=255)
                                                                                                         tGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCGCTTAAATAAGTGATAGTCTGAATACTAGTTTTTAGACTAGTCATTGGGGCACAGATGATTGCTGCCtt                                    >  1:836091/1‑143 (MQ=18)
                                                                                                         tGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCtt                                    >  1:123505/1‑143 (MQ=255)
                                                                                                           gcGTGAGGAGGGCTGCAGGCATTTGATCGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAg                                  <  2:29898/142‑1 (MQ=255)
                                                                                                           aCGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAg                                  <  1:785788/143‑1 (MQ=255)
                                                                                                            cGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAgg                                 <  1:103054/143‑1 (MQ=255)
                                                                                                                aGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCGGACACCCAATATCACTTAACTAAGTGATAGTCTTAATACTAGTTTTTAGCCTAGTCATTGGCGAACAGATGATTGATGTCTTAGGGCCg                             >  1:53373/1‑143 (MQ=17)
                                                                                                                  gggggctgcAGGGATGTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCGATATCACTTAGATAAGGGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGga                           <  2:256183/139‑1 (MQ=17)
                                                                                                                  gcgTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTTAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGga                           <  1:291493/141‑1 (MQ=255)
                                                                                                                  gAGTGCTGGAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGga                           <  2:398394/143‑1 (MQ=255)
                                                                                                                  gAGTGCTGCTGGGATGTGCTGGTCCCTTGTAGGCTGGCCCCCTGAAGCTCCAGTCAACCAGTATCACTTGAATAAGTGATAGTCTTAATACGAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGga                           <  2:734071/143‑1 (MQ=14)
                                                                                                                   aGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGgag                          >  1:896802/1‑143 (MQ=255)
                                                                                                                      gctgcAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCAATGGAGAACAGATGATTGATGTCTTAGGGCCGGAGaaa                       >  2:259840/1‑143 (MQ=255)
                                                                                                                          cAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCa                                                                                                                      >  2:94103/1‑44 (MQ=255)
                                                                                                                          cAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCa                                                                                                                      <  1:94103/44‑1 (MQ=255)
                                                                                                                            gggATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGCTTGATGTCTTAGGGCCGGAGACACGCAGa                 >  1:794712/1‑143 (MQ=255)
                                                                                                                            gggATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGa                 >  1:553441/1‑143 (MQ=255)
                                                                                                                                tttGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGCGAAACGCAGACGGc             >  1:199916/1‑143 (MQ=255)
                                                                                                                                cttGATGGGCGCTGGTAGACTGGCCCCCTGCATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGc             <  1:349075/142‑1 (MQ=255)
                                                                                                                                     tGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATACGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGCGCACAGATGATTGATGTCTTAGGGCCGAAGCAACGCAGACGGCggccc        >  2:491739/1‑139 (MQ=11)
                                                                                                                                     tGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGCAACGCAGACGGCGTAcc        >  2:695501/1‑143 (MQ=38)
                                                                                                                                          ccTTGTAGACTGGCCCCCTGTATCTCCAGACAACCAGTATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACcacaca   <  2:214941/143‑1 (MQ=18)
                                                                                                                                          ccTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTCCcgcaca   >  2:728967/1‑143 (MQ=18)
                                                                                                                                           ttagTAGACTGGCCCCCTGAAGCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAg  <  1:459199/140‑1 (MQ=1)
                                                                                                                                               |                                                                                                                                          
GCAGGGGGGATTATCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAG  >  NC_000913/4498039‑4498319

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.