New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3227830	63 (0.950)	3 (0.050)	3/268	9.9	4.7%	coding (30/1071 nt)	ygjJ	putative periplasmic protein
	?	NC_000913	= 3227835	62 (0.990)					coding (35/1071 nt)	ygjJ	putative periplasmic protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3227681‑3227830 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagagcaAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAGG  <  NC_000913/3227835‑3227699                                                                                                                                                                                                                                                                                                 AAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATAGTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATG                                                                                                                                                  <  1:608474/143‑1     gcGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGA                                                                                                                                              <  1:147649/141‑1                                                  TTCTGCCTTTATATTTGTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTA                                                                                                 <  1:681754/143‑1                                                                                                                      ACAATGAAATTAATCACTGCACCATGCAGAGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGT                                                                                                     <  1:1028224/71‑1                                                                                                                      ACAATGAAATTAATCACTGCACCATGCAGAGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGT                                                                                                     >  2:1028224/1‑71                                                                                                                                                 AGAGCAAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATAGAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAGG  >  1:872906/1‑143                                                                                                                                                                                                                                                                                                 AAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3227681‑3227830 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagagcaAGTAATGCTCTGCATGGTGCAGTGATTAATTTCATTGTGTTAATCCATGAGCTAAAGAAAAAGTACAGCCTTTTATCGTTGTAATTATAAAAATATAAAGGCAGAAACTATTTTCCCTCTCCTCATCCAGGAAGAGG  <  NC_000913/3227835‑3227699

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.