Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,978,503 Δ776 bp insB1insA insB1, insA

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1978503 1979278 776 78 [0] [0] 79 insB1–insA insB1,insA

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 19785020 (0.000)74 (1.180) 63/268 0.0 100% intergenic (‑305/+16) flhD/insB1 flagellar class II regulon transcriptional activator, with FlhC/IS1 transposase B
?NC_000913 1979279 = 0 (0.000)intergenic (‑64/‑474) insA/uspC IS1 repressor TnpA/universal stress protein

TCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTA  >  NC_000913/1978364‑1978638
                                                                                                                                          |                                                                                                                                        
tCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtata                                                                                                                                      >  1:1158851‑M1/1‑139 (MQ=255)
 cTTTATTCTTATCTAAGATTTTTCTTAAAGCGACGCCACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGTTTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataa                                                                                                                                     <  2:667770‑M1/143‑6 (MQ=255)
  tttACACTTATTTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataag                                                                                                                                    <  2:702534‑M1/143‑7 (MQ=255)
  tttACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTGCACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTGCTTAACATAAATGtataag                                                                                                                                    >  1:691027‑M1/1‑137 (MQ=255)
   ttACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACAACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATAtataaat                                                                                                                                   >  2:657726‑M1/1‑136 (MQ=255)
            tCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACAGACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatactttt                                                                                                                          <  2:873776‑M1/143‑17 (MQ=255)
                aGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttt                                                                                                                      >  1:460591‑M1/1‑123 (MQ=255)
                 gATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgtttt                                                                                                                     <  1:139832‑M1/143‑22 (MQ=255)
                  aTTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGAAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACCCAAAACACTCAATTACTTAACATAGATGtataagtcatacttttgtcttc                                                                                                                    >  1:140212‑M1/1‑121 (MQ=255)
                   tttttCCTAAATCGACGCAACTGTACTCGTCACTACCCGCACAGAGAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgg                                                                                                                   <  1:101131‑M1/143‑24 (MQ=255)
                    ttttCCTAAATCGACGCAACTGTACTCGTCACTACACGCCCATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCCATTACTTAACATCAATGtataagtcatccttttgttttggg                                                                                                                  >  2:760662‑M1/1‑119 (MQ=255)
                         cTAAATCGACGCAACTGTACTCGTCACTACACGCCCATACATCGGGGGGGGGCTGCGATTTTCAATAATGCATGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttatgggtgtat                                                                                                             >  2:366718‑M1/1‑114 (MQ=255)
                          tAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttgtgttttgggtgtatt                                                                                                            >  1:424884‑M1/1‑113 (MQ=255)
                             aTCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatactatagttttgggtgtatttca                                                                                                         >  2:750155‑M1/1‑110 (MQ=255)
                              tCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaa                                                                                                        <  1:406440‑M1/143‑35 (MQ=255)
                                   gCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgt                                                                                                   >  1:1189847‑M1/1‑104 (MQ=255)
                                         gTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaa                                                                                             <  2:656395‑M1/143‑46 (MQ=255)
                                         gTACTCGTCACTACACGCACATACAAAGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaa                                                                                             >  1:559799‑M1/1‑98 (MQ=255)
                                             tCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagttt                                                                                         >  1:903670‑M1/1‑94 (MQ=255)
                                             tCGTCACCACACGCACATACAACGGAGGGGGGCTGCGATTTTCGAGAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatccttttgtttttggtgtatttcaatctgttaaaaaggtt                                                                                         >  1:102901‑M1/1‑94 (MQ=255)
                                               gTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagttttt                                                                                       <  1:862010‑M1/143‑52 (MQ=255)
                                               gTCACTACACGCACATACAACGGAGGGGGGATGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacctttgttttgggtgtatttcaatctgttaacaagttttt                                                                                       >  1:322365‑M1/1‑92 (MQ=255)
                                               gTCACTACACGCACAGACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagttttt                                                                                       <  2:1058532‑M1/143‑52 (MQ=255)
                                                tCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAACACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaacgtttttc                                                                                      >  2:826626‑M1/1‑91 (MQ=255)
                                                 cACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcg                                                                                     >  1:329018‑M1/1‑90 (MQ=255)
                                                   cTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgct                                                                                   <  2:1024662‑M1/143‑56 (MQ=255)
                                                    tACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctt                                                                                  >  2:234724‑M1/1‑87 (MQ=255)
                                                      gacggagatacaactGAGGGGGGCTGCGAGTTTCAATAATGCGCGATGCAGATCACACAAAACACTCATTTCCTTTACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacg                                                                                <  2:452674‑M1/136‑59 (MQ=255)
                                                       acGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgc                                                                               >  1:1089522‑M1/1‑84 (MQ=255)
                                                         gCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATACAAGtttggcgaataccgttggtttgggtgtatttcaatctgttaaaaagtttttcgctacgcta                                                                             >  1:1192847‑M1/1‑82 (MQ=255)
                                                         gCACATACAACGGAGGGGGGCTGCGATTTTCAAGAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgcta                                                                             <  2:1021123‑M1/143‑62 (MQ=255)
                                                             aTACAACGGAGGGGTGCTGCGATTTTCAATAATGCGTGATGCAGATTACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaa                                                                         <  2:542649‑M1/143‑66 (MQ=255)
                                                                 aaCGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaacagtttttcgctacgctagcaggcaa                                                                     >  2:1141289‑M1/1‑74 (MQ=255)
                                                                    gcaggGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaa                                                                  <  1:692581‑M1/141‑73 (MQ=255)
                                                                      aGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTGAATTACATAACATATATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatg                                                                <  1:223473‑M1/143‑75 (MQ=255)
                                                                         ggggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaa                                                             <  1:972967‑M1/143‑78 (MQ=255)
                                                                         ggggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaa                                                             <  1:798037‑M1/143‑78 (MQ=255)
                                                                         ggggCTCCGATTTTCAATAATGCGTGATGCAGATCACACAAAACCCTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtattccaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaa                                                             <  1:1091395‑M1/143‑78 (MQ=255)
                                                                          gggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaac                                                            >  1:1151130‑M1/1‑65 (MQ=255)
                                                                           ggCTGCGCTTTTCAATAATGAGTGATGCAGATCATACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaaca                                                           <  2:831541‑M1/143‑80 (MQ=255)
                                                                            gCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtatacatcatacttttgttttgggtgtctatcactctgttaaaaagtttttctctacgctaccaagcaaaaatgatacag                                                          >  2:237647‑M1/1‑63 (MQ=255)
                                                                             cTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacagg                                                         >  2:195906‑M1/1‑62 (MQ=255)
                                                                             cTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataaggcagacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacagg                                                         >  2:582434‑M1/1‑62 (MQ=255)
                                                                              tGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagacatacttttgttttgggtgtatttcaatctggtaaaaagtgtatcgctacgcttgccagcaaaaatgaaacagga                                                        >  1:654727‑M1/1‑61 (MQ=255)
                                                                                  aTTTTCAATAATGCGTGATGCAGATCACACAAAACACTGAATTACTTAACATAAATGtataagtcatactgttgttttgggtgtatttcaatctgttaaaaagtttttcgctacggtagcaagcaaaaatgaaacaggaataa                                                    <  2:761097‑M1/143‑87 (MQ=255)
                                                                                    tttCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgatagcaagcaaaaatgaaacaggaataatc                                                  >  1:789061‑M1/1‑55 (MQ=255)
                                                                                    tttCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcataattttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataagc                                                  >  2:601718‑M1/1‑55 (MQ=255)
                                                                                    tttCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTGAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatc                                                  <  1:227264‑M1/143‑89 (MQ=255)
                                                                                     ttCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcg                                                 >  2:299909‑M1/1‑54 (MQ=255)
                                                                                         ttattgcgtGATGCAGATCACACAAAACTCTCTATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtgtttcgctacgctagcaagcaaaaatgaaacaggaatactcgaaat                                             <  2:230318‑M1/139‑94 (MQ=255)
                                                                                            atGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggcataatcgaaatggg                                          >  2:721019‑M1/1‑47 (MQ=255)
                                                                                            aggcgTGATGCAGATTACAGAAAACACTCAGTTGCGTAACATAAATGtataagtcatgcgtttttttggggtgtatttcaatctgttaaaaagtttttcgcgacgctagcaagcaaaaatgaaacaggaataatcgaaatggg                                          <  2:1042242‑M1/141‑97 (MQ=255)
                                                                                              gCGTGATGCAGATCACACAAAACACTCAATTACTTAACCTAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggat                                        <  2:890326‑M1/143‑99 (MQ=255)
                                                                                                 tGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgtt                                     >  1:68690‑M1/1‑42 (MQ=255)
                                                                                                 tGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgtt                                     >  1:763567‑M1/1‑42 (MQ=255)
                                                                                                    tGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcg                                  >  2:780578‑M1/1‑39 (MQ=255)
                                                                                                     gCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaaagggatgttgcgc                                 >  1:858051‑M1/1‑38 (MQ=255)
                                                                                                      cAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgca                                <  1:79842‑M1/143‑107 (MQ=255)
                                                                                                       aGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcac                               >  1:360608‑M1/1‑36 (MQ=255)
                                                                                                         aTCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacag                             <  2:383882‑M1/143‑110 (MQ=255)
                                                                                                         aTCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacag                             <  1:489502‑M1/143‑110 (MQ=255)
                                                                                                           cacacaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttacaaagtttttcgctacgctagcaagcaaaaatgaatcaggaataaccgaaatgagatgttgcgcacagtc                           >  1:321586‑M1/1‑32 (MQ=255)
                                                                                                            acacaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttatcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcg                          >  1:601443‑M1/1‑31 (MQ=255)
                                                                                                              acaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaa                        >  1:658462‑M1/1‑29 (MQ=255)
                                                                                                              acaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaa                        >  1:1202912‑M1/1‑29 (MQ=255)
                                                                                                              acaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaa                        >  2:758861‑M1/1‑29 (MQ=255)
                                                                                                               caAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaa                       <  2:1192847‑M1/143‑116 (MQ=255)
                                                                                                                      cTCAATTACTTAAGATAGATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactca                <  2:1098590‑M1/143‑123 (MQ=255)
                                                                                                                         aaTTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttaaatctgttaaaaagtttttagctacgctgacaagcacaaataaaacaggaataatagacataggatgttccgcacagtcaaactaaataccga             >  2:256569‑M1/1‑18 (MQ=255)
                                                                                                                                tcacaTAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaataa      <  2:1025732‑M1/141‑133 (MQ=255)
                                                                                                                                 aaCATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaataat     >  1:801153‑M1/1‑10 (MQ=255)
                                                                                                                                 aaCATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaataat     >  2:329882‑M1/1‑10 (MQ=255)
                                                                                                                                  aCATAAGTGtataggtcatacttttgttttgggtgtatttcaagctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaataatc    <  2:186259‑M1/143‑135 (MQ=255)
                                                                                                                                  aCATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaataatc    >  1:186999‑M1/1‑9 (MQ=255)
                                                                                                                                    aTAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaatcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacggtcaaaataactcaccgtaaataatcat  >  2:989255‑M1/1‑7 (MQ=255)
                                                                                                                                    aTAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactgaccgtaaataatcct  >  1:1065001‑M1/1‑7 (MQ=255)
                                                                                                                                    aTAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaataatcat  >  1:1050709‑M1/1‑7 (MQ=255)
                                                                                                                                    aTAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaataatcat  >  2:936596‑M1/1‑7 (MQ=255)
                                                                                                                                          |                                                                                                                                        
TCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTA  >  NC_000913/1978364‑1978638

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.