Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 2,313,540 Δ2 bp :: IS186 (+) +6 bp coding (53‑58/2673 nt) rcsD → phosphotransfer intermediate protein in two‑component regulatory system with RcsBC

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2313540 =0 (0.000)53 (0.930) 42/274 0.3 100% coding (53/2673 nt) rcsD phosphotransfer intermediate protein in two‑component regulatory system with RcsBC
?NC_000913 = 2515617 NA (NA)noncoding (1345/1345 nt) IS186 repeat region
* ? NC_000913 = 23135450 (0.000)48 (0.830) 43/278 0.3 100% coding (58/2673 nt) rcsD phosphotransfer intermediate protein in two‑component regulatory system with RcsBC
?NC_000913 2514275 = NA (NA)noncoding (3/1345 nt) IS186 repeat region

TCAATCAGGTAAGAGTCTGGAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAAGATAAAAGTTACCAGATTGTCGACATTACCCATGCTATCCAAAAGCGCGT  >  NC_000913/2313402‑2313678
                                                                                                                                           |                                                                                                                                          
tcaatcaGGTAAGAGTCCGGAATTTCACACTGTACCCTTAGTTGAAAATGATTTCTTCCCGAAGTTTTAACCGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCAtt                                                                                                                                        <  1:446789/143‑1 (MQ=255)
       ggtggccactcgtggtacagtatccctgacagcctacaaaacgcaattgaagatcgcgaggcatcgtcttaacgatgcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGc                                                                                                                                  >  2:424282‑M1/133‑143 (MQ=255)
        gtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagctggttcaacccttaagttagcgcttatgggaGCATTACCCGct                                                                                                                                 <  1:805612‑M1/12‑1 (MQ=255)
        gTAAGAGTCTGGAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataag                                                                                                                                >  1:205363‑M1/1‑136 (MQ=255)
           gcgatgcgcgggacggtatccctggcagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGcttct                                                                                                                              >  2:186337‑M1/129‑143 (MQ=255)
                 tGGAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGACTGCGTCAGAAAGAGACAACGGCCACGACCCGCATTTCACTCCTACCGGGTAGCATTAccacgagcgcgaccgc                                                                                                                       >  2:825642‑M1/1‑127 (MQ=255)
                 tGGAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataagcgctaactt                                                                                                                       >  1:691982‑M1/1‑127 (MQ=255)
                 tGGAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataaccgctaactt                                                                                                                       >  1:957663‑M1/1‑127 (MQ=255)
                  gtgggacagtatccctgacagcctacaaaacgcaatggaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACt                                                                                                                       >  1:512806‑M1/122‑143 (MQ=255)
                  ggcatttCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTGTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataagcgctaactta                                                                                                                      <  2:422905‑M1/140‑18 (MQ=255)
                  ggAATTTCAGCCGGTGCCCTGTAGACAGCCCTAGCCCTACGCGAAGTTTTAACCGGTCATAAACACGAATGCGTCAGAAAGAGGCAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataagcgctaactta                                                                                                                      <  2:258676‑M1/143‑18 (MQ=255)
                  ggAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataagcgctaactta                                                                                                                      >  1:945055‑M1/1‑126 (MQ=255)
                   tgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTg                                                                                                                      <  1:45683‑M1/23‑1 (MQ=255)
                   tgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgacttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaaggtagcgcttatgggaGCATTACCCGCTTCTTGTtacgg                                                                                                                      <  1:555411‑M1/23‑3 (MQ=255)
                    gggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGt                                                                                                                     <  1:191413‑M1/24‑1 (MQ=255)
                       acagtctccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcagtcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGa                                                                                                                  >  2:152583‑M1/117‑143 (MQ=255)
                        tCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataagcgctaacttaagggtt                                                                                                                >  2:496373‑M1/1‑120 (MQ=255)
                        cggtgtcccgcacagcctactacgcgcagctgaataacgcgaggcatcgtcttaccgaggcaccgaggcgtcgcagtcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGAt                                                                                                                 >  2:846035‑M1/116‑143 (MQ=255)
                        cagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggtccaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGAt                                                                                                                 >  1:555365‑M1/116‑143 (MQ=255)
                         cacaCTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCCGGGAGCATTAccatcagcgctaacttaagggttg                                                                                                               >  2:585741‑M1/1‑119 (MQ=255)
                           cacTGTACCCTTTATACGGCCCTATCACTGCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataagcgctaacttaagggttgtg                                                                                                             <  2:233941‑M1/143‑27 (MQ=255)
                           cacCGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataagcgctaacttaagggttgtg                                                                                                             <  1:355740‑M1/143‑27 (MQ=255)
                               cctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATtgtg                                                                                                          <  1:209047‑M1/35‑1 (MQ=255)
                               cctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATtgtg                                                                                                          <  1:700061‑M1/35‑1 (MQ=255)
                                tACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAACATTAccataagcgctaacttaagggttgtggtagt                                                                                                        >  2:58897‑M1/1‑112 (MQ=255)
                                ctgccagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTgtgt                                                                                                         >  2:183603‑M1/108‑143 (MQ=255)
                                ctgacagcctacacaacgcaattgaagagcgcaatgcacctccttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTgtgt                                                                                                         >  1:719497‑M1/108‑143 (MQ=255)
                                     tttATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGCGAGCATTAccataagcgctaacttaagggtggtggtattacgcc                                                                                                   >  2:396130‑M1/1‑107 (MQ=255)
                                       cctacaagacgcaagtgaatgtcgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGt                                                                                                  >  2:4044‑M1/101‑143 (MQ=255)
                                         tacaaaacgcaattgaagcacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGa                                                                                                >  1:90732‑M1/99‑143 (MQ=255)
                                         taCTGCCCTATCACTTCGCGAAGCTTTAACAGGCCATACACACGACTGCTTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataagcgctcacttaagggttgtggtattacgcctgat                                                                                               <  2:734344‑M1/143‑41 (MQ=255)
                                          acaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGAc                                                                                               <  1:897089‑M1/46‑1 (MQ=255)
                                            tGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGAGCCGGTTTTCACTCCTACCGGGGAGCATTAccataagcgctaacttaagggttgtggtattacgccggatatg                                                                                            >  1:787543‑M1/1‑100 (MQ=255)
                                            aaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattctccagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTGTTACTGTTGATCGTCGTGCTGCTGCTGACGa                                                                                             <  2:949056‑M1/48‑1 (MQ=255)
                                              aacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggagtcgcattctgcagctggatcaacccttaaggtagcgcttatgggaGCATTACCCGCTTCTTCTTACTGTTGCTCATTGTGGTCCTGGTgacggga                                                                                           <  2:269992‑M1/50‑4 (MQ=255)
                                               acgcagttgaggaacgctaggcatcttcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTGTTTACTGTTGATCATTGTGTTACTGGTGACGATgg                                                                                          >  2:205716‑M1/93‑143 (MQ=255)
                                                   aattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATGGGGTTACTGGTGACgatgggggt                                                                                      <  1:392117‑M1/55‑4 (MQ=255)
                                                       gaagaacgcgaggcatcgtcttaacgtggcaccgacgcgtcgtattcttcacatggttcaacccttaagttagcgcttatgggaGCATTAGCCGCTTCTTTGTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATg                                                                                  >  2:510053‑M1/85‑143 (MQ=255)
                                                          gcgAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtggcga                                                                              >  1:236446‑M1/1‑86 (MQ=255)
                                                          gaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCCTTGTGTTACTGGTGACGATGGGTCTAATGGTa                                                                               <  2:513181‑M1/62‑1 (MQ=255)
                                                           cgAAGGTTTAACGGGTCACGTACCCGATTGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgat                                                                             <  2:907964‑M1/143‑59 (MQ=255)
                                                           aacgcgaggcatcgtcttaacgaggccccgaggcgacgcattcttcagatggttcaacacttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTCCTGTTGATCATTGTGGTACCGGGGACGATGGGGGTaatggcac                                                                              <  2:112713‑M1/63‑4 (MQ=255)
                                                            gAAGGTTTAACAGGTCATAAACACGAATGCGACAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataagcgctaaaataagggttgtggtattacgactgatatgatataacgtgccgaag                                                                            >  2:144018‑M1/1‑84 (MQ=255)
                                                               gTTTTAACAGGTCCTACACACAATGTCGTCAGAAAGAGACAACGGCCACGCCCCGCTTTTCACTCCTACCGCCGAGCATTCtcatatgcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaat                                                                         <  2:699801‑M1/143‑63 (MQ=255)
                                                                ttttAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaatt                                                                        >  1:683283‑M1/1‑80 (MQ=255)
                                                                   gcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGcc                                                                      <  1:955418‑M1/71‑1 (MQ=255)
                                                                    aaCAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgacgatgaattgctc                                                                    >  1:255681‑M1/1‑76 (MQ=255)
                                                                       aGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctca                                                                 <  1:623817‑M1/143‑71 (MQ=255)
                                                                        cgtgataagCACGAATGCGTCAGAAAGAGAGAACGGCCACGACCCGCTTGTGACTCCTACCGGGGATCATTAccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcac                                                                <  2:701075‑M1/139‑72 (MQ=255)
                                                                         tcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGCCGTTAAc                                                                <  2:208797‑M1/77‑1 (MQ=255)
                                                                         gTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacg                                                               >  2:419248‑M1/1‑71 (MQ=255)
                                                                          tCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccatgagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgcggaattactctcacga                                                              >  2:120211‑M1/1‑70 (MQ=255)
                                                                           ttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACGAGGCGCGgttaaggg                                                              <  1:76685‑M1/79‑4 (MQ=255)
                                                                           ttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGCCGTTAACGc                                                              >  2:581122‑M1/65‑143 (MQ=255)
                                                                             tAAACAGGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataa                                                           <  1:620641‑M1/143‑77 (MQ=255)
                                                                             tAAACACGAATGCGTCAGAAAGAGACAACGGCCACGCCCCGCTTTTCACTCCTACCGGGGAGCATTAccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataa                                                           <  1:35664‑M1/143‑77 (MQ=255)
                                                                             tAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataagcgctaacttaagggttgtggtattacgcctgctacgatttaacgtgccggtgaattactctcccgataa                                                           >  1:51934‑M1/1‑67 (MQ=255)
                                                                                  acGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggt                                                      >  2:1040553‑M1/1‑62 (MQ=255)
                                                                                     accgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGAGGGGTGTAATGGTACAAAGCGCCGCTAACGCCTGGCTGaaa                                                    <  1:157100‑M1/89‑1 (MQ=255)
                                                                                       cgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGCTGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAAGa                                                  <  2:656482‑M1/91‑1 (MQ=255)
                                                                                          ggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAAGATaa                                               <  1:52435‑M1/94‑1 (MQ=255)
                                                                                            cgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAAGATaaaa                                             >  1:633550‑M1/48‑143 (MQ=255)
                                                                                            cgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAAGATaaaa                                             >  1:590131‑M1/48‑143 (MQ=255)
                                                                                            cgtcgcattcgtcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAAGATaaaa                                             >  2:803745‑M1/48‑143 (MQ=255)
                                                                                             cAGAAAGAGACAACGGCCACGACCCGCTTGTCACTCCTACCGGGGAGCATTAccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattct                                            <  2:709326‑M1/143‑92 (MQ=255)
                                                                                              tcgcattcttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACCGGTGACGGTGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAAgataaacgt                                           <  1:93960‑M1/98‑4 (MQ=255)
                                                                                              aGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataagcgctaacttaagggttgtggtattacgcctgatatgctttaacgtgccgatgagtgactctcacgataagtggtcagcaattgtg                                           >  2:712266‑M1/1‑51 (MQ=255)
                                                                                                aaaGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggc                                         >  2:140773‑M1/1‑49 (MQ=255)
                                                                                                aaaGACACAACGGCCACTACCCGCTCTGCACTGCTCCCGGGGAGCATTAccatacgcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggc                                         <  2:370419‑M1/143‑95 (MQ=255)
                                                                                                    agaCAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccat                                     >  1:369780‑M1/1‑45 (MQ=255)
                                                                                                      ttcagatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAAGATAAAAGTTACCAGAt                                   <  2:901146‑M1/106‑1 (MQ=255)
                                                                                                      aCAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCAGTAccataagcgctaactgaagggttggggtatgacgcctgataggatttaacgggccggtggatgactcccacgataacaggtcagcaattctgggccaact                                   >  2:290156‑M1/1‑43 (MQ=255)
                                                                                                       cAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatatt                                  <  1:461781‑M1/143‑102 (MQ=255)
                                                                                                        aaCGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataagcgctaccttaagggttgtggtattacgcctgatatgatttcacgtgccgatgaattactctcacgataatccatcagcaattctgacccatattg                                 >  2:943427‑M1/1‑41 (MQ=255)
                                                                                                         aCGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattgg                                <  1:126476‑M1/143‑104 (MQ=255)
                                                                                                          ggtggttcaacccttaggttagcgcttatgggcGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATAGTACAAAGCGCCGTTAACCCCTGGCTGAAAGATAAAAGTTACCAGATTGTc                               >  2:555411‑M1/34‑143 (MQ=255)
                                                                                                          gatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAAGATaaaa                                             >  2:90216‑M1/34‑129 (MQ=255)
                                                                                                          gatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAAGATaaaa                                             <  1:90216‑M1/96‑1 (MQ=255)
                                                                                                          gatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAAGATAAAAGTTACCAGATTGTc                               >  2:45683‑M1/34‑143 (MQ=255)
                                                                                                          gatggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAAGATAAAAGTTACCAGATTGTc                               >  1:873999‑M1/34‑143 (MQ=255)
                                                                                                          gatggttcaacccttaagttagcgctgatgggaGCAGTACCCGCTTCTGTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAAGATAAAAGTTACCAGATTGTc                               >  1:340926‑M1/34‑143 (MQ=255)
                                                                                                            tggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAAGATAAAAGTTACCAGATTGTCGa                             >  2:213250‑M1/32‑143 (MQ=255)
                                                                                                             ggttcaacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAAGATAAAAGTTACCAGATTGTCGAc                            >  1:832719‑M1/31‑143 (MQ=255)
                                                                                                              cACGACCCGCTTTTCACTCCTACCGGGGAGCATTAccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgatggctggggtgtaattctggcccacagtggtagtc                           >  1:441660‑M1/1‑35 (MQ=255)
                                                                                                                  aacccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAAGATAAAAGTTACCAGATTGTCGACATTAc                       <  1:581051‑M1/118‑1 (MQ=255)
                                                                                                                   cccGCTGTTCACTCCTACCGGGGAGCATTAccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaa                      <  1:951547‑M1/143‑114 (MQ=255)
                                                                                                                   atccttgagttagtgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAAGATAAAAGTTACCAGATTGTCGACATTAcc                      >  1:573171‑M1/25‑143 (MQ=255)
                                                                                                                   acccttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTTATGTTACAAAGCGCCGTTAACGCCTGGCTGAAAGATAAAAGTTACCAGATTGTCGACATTAcc                      >  2:700061‑M1/25‑143 (MQ=255)
                                                                                                                    ccGCTTTTCACTCCTACCGGGGAGCATTAccataagagctaacttaagggttgtggtattacgcctgatatgattaaacgtgccgatgaattactctcacgataacgggtcagcaatgctggcccatatcggtgagcccgaag                     >  2:870418‑M1/1‑29 (MQ=255)
                                                                                                                      cttaagttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAAGATAAAAGATACCAGATTGTCGACATTACCCAt                   <  2:22104‑M1/122‑1 (MQ=255)
                                                                                                                           gttagcgcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAAGATAAAAGTTACCAGATTGTCGACATTACCCATGCTAt              >  1:901146‑M1/17‑143 (MQ=255)
                                                                                                                               tCCTACCGGGGAGCATTAccataagcgctaactaaagggttgtggcatcacgcctgataagatgtaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatact          >  1:1038828‑M1/1‑18 (MQ=255)
                                                                                                                                 gcttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAAGATAAAAGTTACCAGATTGTCGACATTACCCATGCTATCCaaaa        >  2:191413‑M1/11‑143 (MQ=255)
                                                                                                                                  tACCGGGAAGCATTAccatgagctataatttaaggtggggggtattacgcctcatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcg       <  1:537653‑M1/143‑129 (MQ=255)
                                                                                                                                  cttgtgggaGCATCACCCGCTGCTTTTTGCGCGTGAGCATTGTGTTACCGGGGACGATGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAAGATAAAAGTTACCAGATTGTCGACATTACCCATGCTATCCAAAAg       >  2:311208‑M1/10‑143 (MQ=255)
                                                                                                                                   ttatgggaGCATTACCCGCTTCTTTTTACTGTTGATCAGTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAGGATGAAAGTTACCAGATTGTCGACATTACCAAGGCTATAAAAAAgc      <  1:463552‑M1/135‑1 (MQ=255)
                                                                                                                                   aCCGGGGAGCATTAccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcgg      >  1:809330‑M1/1‑14 (MQ=255)
                                                                                                                                    tatgggaGCATTACCCGCTTCTCTTTACTGCTCATCATTGTGTTACGGGTGACGATGGGTGTACGGGTACAAAGCGCCGTTAACGCCTGGCTGAAAGATAAAAGTTACCAGATTGTCGACATTACCCATGCTATCCAAAAgcg     >  1:83910‑M1/8‑143 (MQ=255)
                                                                                                                                     cGGGGAGCATTAccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggca    <  1:496373‑M1/143‑132 (MQ=255)
                                                                                                                                       gggaGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTACTGGTACAAAGCGCCGTTAACGCCTGGCTGGAGGATAAAAGTAACCAGACTGGCGACATTACCCATGCTATCCAAACGCGCGt  <  2:121058‑M1/139‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                          
TCAATCAGGTAAGAGTCTGGAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAAGATAAAAGTTACCAGATTGTCGACATTACCCATGCTATCCAAAAGCGCGT  >  NC_000913/2313402‑2313678

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.