New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 565828	64 (1.060)	7 (0.120)	5/284	8.1	9.9%	coding (151/1164 nt)	intD	DLP12 prophage; putative phage integrase
	?	NC_000913	= 575785	NA (NA)					noncoding (1/1195 nt)	IS5	repeat region
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATCTTTAAGCCTTATACCCTCAAAATGTTCAAGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCTTTGTGCCAAGAGATTCCTTAATTCGTTTCCCGCCCGGGAGCGAATACGAGGCATACCATATTTCATTTCTGCGGAA  >  NC_000913/565688‑565969                                                                                                                                             |                                                                                                                                              atCTTTAAGCCTTATACCCTCAAAATGTTCAAGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCt                                                                                                                                             >  2:752645/1‑143 (MQ=255)   cTTTAAGCCTTATACCCTCAAAATGTTCAAGCCAGAACTCAATCCGGCTTTTATCTGAATCGGGAGGTGTGTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCGAGCttt                                                                                                                                           >  1:983363/1‑143 (MQ=255)     ttAAGCCTTATACCCTCAAAATGTTCAAGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTCGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTc                                                                                                                                         >  1:171727/1‑143 (MQ=255)     ttAAGCCTTATACCCTCAAAATGTTCAAGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACGTCAGGTAAATCCCCTAGCTTTTc                                                                                                                                         <  2:135682/143‑1 (MQ=255)     ttAAGCCTTATACCCTCAAAATGTTCAAGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAACTCCCCTAGCTTTTc                                                                                                                                         >  2:158179/1‑143 (MQ=255)      tAAGCCTTATACCCTCAAAATGTTCAAGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCGCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCttttac                                                                                                                                        >  2:538828/1‑141 (MQ=255)          ccTTATACCCTCAAAATGTTCAAGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCACAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTc                                                                                                                                    >  1:187249/1‑143 (MQ=255)            ttATACCCTCAAAATGTTCAAGCCAGACCTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGc                                                                                                                                  <  1:1019101/143‑1 (MQ=255)            ttATACCCTCAAAATGTTCAAGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGc                                                                                                                                  >  1:532653/1‑143 (MQ=255)                 cccTCAAAATGTTCAAGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCagag                                                                                                                             <  1:381600/143‑1 (MQ=255)                   cTCAAAATGTTCAAGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGACTTGTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTCGCTTTTCTACTCGCCAGAGtc                                                                                                                           >  2:706821/1‑142 (MQ=255)                    tCAAAATGTTCAAGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTCAATCCCCTAGCTTTTCTACTCGCCAGAGTTc                                                                                                                          >  2:125928/1‑143 (MQ=255)                     cAAAATGTTCAAGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCt                                                                                                                         <  2:867942/143‑1 (MQ=255)                           gTTCAAGCCACACCTCAATCCGGCTTTTATCTGAATCGACAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTACGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCtttt                                                                                                                   <  1:698500/143‑1 (MQ=255)                           cttCAAGCCATAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCtttt                                                                                                                   <  2:505424/142‑1 (MQ=255)                             tCAAGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAGTCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCg                                                                                                                 <  1:441348/143‑1 (MQ=255)                              cAAGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGc                                                                                                                <  2:304482/143‑1 (MQ=255)                               aaGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCt                                                                                                               >  2:391049/1‑143 (MQ=255)                                aGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCtt                                                                                                              >  2:874960/1‑143 (MQ=255)                                   cAGAACTCAATCCGGCTTTTATCTGAATCGAGTGATTTTTTATCAGCTTTTTCCTCAAGCCCTCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTCGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTc                                                                                                           >  1:223688/1‑143 (MQ=255)                                   cAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTACATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTc                                                                                                           >  1:375713/1‑143 (MQ=255)                                    aGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCg                                                                                                          <  2:401597/143‑1 (MQ=255)                                      accTCAATCCGGCGTTTATCTTAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTg                                                                                                        <  2:99666/141‑1 (MQ=255)                                       aCTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGc                                                                                                       <  2:238709/143‑1 (MQ=255)                                          cAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTTCTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAAc                                                                                                    <  1:414193/143‑1 (MQ=255)                                             tCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCCACTcc                                                                                                 >  1:46976/1‑143 (MQ=255)                                             tCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTcc                                                                                                 <  1:516793/143‑1 (MQ=255)                                                ggCTTGTATCTGAATCGAGAGATTTTTTATCCGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGa                                                                                              <  2:462171/143‑1 (MQ=255)                                                     ttATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGGGACATCGTGTAAATCCCCTAGCTTTTCTACTCGCCAGAGCTGTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTg                                                                                         <  2:537272/143‑1 (MQ=255)                                                           gAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGttt                                                                                   <  2:953409/143‑1 (MQ=255)                                                           gAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGttt                                                                                   >  1:544504/1‑143 (MQ=255)                                                              tCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTCAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCACCTCCTGAGCTTGCCGTTTGTc                                                                                >  1:980954/1‑143 (MQ=255)                                                                gagagaTTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCt                                                                              <  1:829707/143‑1 (MQ=255)                                                                  gagaTTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCttt                                                                            >  1:96078/1‑143 (MQ=255)                                                                  gagaTTTTTTATCAGCTTTGTTCTCAATCCATCTTCGGCTGTCTTCTTCTTATTTGACTTCAGTTATTTCTCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCttt                                                                            <  1:183235/143‑1 (MQ=255)                                                                  gagaTTTTGTATCAGCTGTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCttt                                                                            <  1:380474/143‑1 (MQ=255)                                                                   agaTTTGTGATCCGCTTTTAACTTATGCCATCTTAGGCAGGCCTCTGCAAAAGTGACATCAGGTAAATCCCCTCGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCACCTCCTGAGCTTGCCGTTTGTCCTTtg                                                                           <  2:1003721/143‑1 (MQ=255)                                                                    gaTTTTTTATCAGTGTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCTTtgt                                                                          <  2:61070/143‑1 (MQ=255)                                                                      ttttttATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGGCATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCTTTGTGc                                                                        <  2:677044/143‑1 (MQ=255)                                                                        ttttATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCTTTGTGCCa                                                                      >  2:179013/1‑143 (MQ=255)                                                                             tCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCGTGCCGTTTGTCCTTTGTGCCAAgaga                                                                 <  2:242739/143‑1 (MQ=255)                                                                              cAGCTTTTTCCTCCATCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCTTTGTGCCAAGAGAt                                                                <  1:677099/143‑1 (MQ=255)                                                                               aGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGCGTTCTGCTTTTCGCTTGTCGTGCACCTCCTGAGCTTGCCGTTTGTCCTTTGTGCCATGAGAtt                                                               >  1:562496/1‑143 (MQ=255)                                                                                gCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCTGTGTGCCAAGAGATTc                                                              <  2:924900/143‑1 (MQ=255)                                                                                  ttttgCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCTTTGTGCCAAGAGATTCCt                                                            <  2:702460/143‑1 (MQ=255)                                                                                  tgtttCCTCACTCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCGTGCTTTTCTACTCGTCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCTTTGTGCCAAGAGATTCCt                                                            <  2:180540/141‑1 (MQ=255)                                                                                  gttttCCTCGAGCCATCTTAGGCAGGCGTTTTCAAAAGTGACATCAGGTATATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCTTTGTGCCAAGAGATTCCt                                                            <  2:711482/142‑1 (MQ=255)                                                                                   ttttCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGCGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCTTTGTGCCACGAGGTTCCtt                                                           >  1:366483/1‑143 (MQ=255)                                                                                   ttttCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCTTTGTGCCAAGAGCTTCCtt                                                           >  2:1039635/1‑143 (MQ=255)                                                                                         tCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATTAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTGTTCGCTTGTCGTGCAGCTCCTGAGCTTGCCGTTTGTCCTTTGTGCGCGGTGTTTCCTTAGTTCg                                                     >  1:211168/1‑143 (MQ=255)                                                                                             gCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCTTTGTGCCAAGAGATTCCTTAATTCGTTTc                                                 <  1:391049/143‑1 (MQ=255)                                                                                             gCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGCCGTGCAACTCCTGAGCTTGCCGTTTGTCCTTTGTGCCAAGAGATTCCTTAATTCGTTTc                                                 <  1:748106/143‑1 (MQ=255)                                                                                                     aggcaggcCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCTTTGTGCCAAGAGATTCCTTACGTCGGTTCCCGCCCgg                                         >  2:967540/1‑143 (MQ=255)                                                                                                     aggcacgcCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCTTTGTGCCAAGAGATTCCTTAATTCGTTTCCCGCCCgg                                         <  2:112792/143‑1 (MQ=255)                                                                                                             ctctTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCTTTGTGCCAAGAGATTACTTAATTCGTTTCGCGCCCGGGCGCGaag                                 >  2:1079495/1‑142 (MQ=255)                                                                                                               ctTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCTTTGTGCCGCGAGATTCCTTAATTCGTTTCCCGCCTGGGGGCGAGTAc                               >  1:623085/1‑143 (MQ=255)                                                                                                                  cAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCTTTGTGCCACGAGATTCCTTAATTCGTTTCCCGCCCGGGAGCGAATACGAg                            <  1:752645/143‑1 (MQ=255)                                                                                                                  cAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCTTTGTGCCAAGAGATTCCTTAATTCGTTTCCCGCCCGGGAGCGAATACGAg                            <  1:335572/143‑1 (MQ=255)                                                                                                                   aaaaGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCTTTGTGCCAAGAGGTTCCTTAATTCGTTTCCCGCCCGGGAGCGAATACGAgg                           >  1:908728/1‑143 (MQ=255)                                                                                                                                  tAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCTTTGTGCCAAGAGATTCCTTAATTCGTTTCCCGCCCGGGAGCGAATACGAGGCATACCATatttcat            <  1:874960/143‑1 (MQ=255)                                                                                                                                   aaaTCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCTTTGTGCCAAGAGATTCCTTAATTCGTTTCCCGCCCGGGAGCCAATACGAGGCATACCATatttcatt           <  2:135985/143‑1 (MQ=255)                                                                                                                                           tAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCTTTGTGCCAAGAGATTCCTTAATTCGTTTCCCGCCCGGGAGCGAATACGAGGCATACCATAGTTCATTTCTGCggg   >  1:485041/1‑142 (MQ=255)                                                                                                                                           tAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCTTTGTGCCAAGAGATCCCTTAATTCGTTTCCCGCCCGGGAGCGAATACGGGGTTTACCGAATTTCATTCCTGCggc   >  2:709397/1‑142 (MQ=255)                                                                                                                                            aGCTGTTCTCCTCGCCAGAGTTCTGCTTTTCGCTTGGCGTGCAACTCCTGAGCTTGCCGTTTGTCCTTTGTGCCAAGAGATTCCTTAATTCGTTTCCCGCCCGGGAGCGAATACGAGGCATACCATATTTCATTTCTGCGGaa  <  1:125928/143‑1 (MQ=255)                                                                                                                                             |                                                                                                                                              ATCTTTAAGCCTTATACCCTCAAAATGTTCAAGCCAGAACTCAATCCGGCTTTTATCTGAATCGAGAGATTTTTTATCAGCTTTTTCCTCAAGCCATCTTAGGCAGGCCTCTTCAAAAGTGACATCAGGTAAATCCCCTAGCTTTTCTACTCGCCAGAGTTCTGCTTTTCGCTTGTCGTGCAACTCCTGAGCTTGCCGTTTGTCCTTTGTGCCAAGAGATTCCTTAATTCGTTTCCCGCCCGGGAGCGAATACGAGGCATACCATATTTCATTTCTGCGGAA  >  NC_000913/565688‑565969

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.