New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 565828	64 (1.060)	7 (0.120)	5/284	8.1	9.9%	coding (151/1164 nt)	intD	DLP12 prophage; putative phage integrase
	?	NC_000913	= 575785	NA (NA)					noncoding (1/1195 nt)	IS5	repeat region
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTT  >  NC_000913/575651‑575925                                                                                                                                       |                                                                                                                                              tctgTTTGCTGGTCTGACGGCGCGTACTGCTGAATTCACTGTCGGCGAAGGTAAGGTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGaa                                                                                                                                       <  2:641999/143‑1 (MQ=255)  ctctTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAg                                                                                                                                      >  1:1001047/1‑143 (MQ=32)     ttttCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCa                                                                                                                                   >  1:486140/1‑143 (MQ=35)          tGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCAttttt                                                                                                                              <  1:1036464/143‑1 (MQ=39)          tGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCAttttt                                                                                                                              <  2:483089/143‑1 (MQ=39)          cagTCTGCCGGCGCGAACTGCCGAATTCACGGCCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCAttttt                                                                                                                              <  1:824106/141‑1 (MQ=14)            gTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGt                                                                                                                            <  1:467816/143‑1 (MQ=40)            gTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGt                                                                                                                            <  1:365443/143‑1 (MQ=40)             tCTGACGGCGCTTACTGCTGAAGTCACTGTAGGCGAAGGTAAGTTGATGAATCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATCTCAAGGACGTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTc                                                                                                                           <  2:278382/143‑1 (MQ=14)                gACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGAGCTCATCTCAGCGACTTCTTCGCACCTTCCTTAGTGAAGTCATTTTTGGCAAg                                                                                                                        >  1:37663/1‑143 (MQ=14)                 aCGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGc                                                                                                                       <  1:594708/143‑1 (MQ=255)                 aCGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGc                                                                                                                       <  2:490268/143‑1 (MQ=255)                 aCGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGc                                                                                                                       >  1:922065/1‑143 (MQ=255)                        ttACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGa                                                                                                                >  1:64745/1‑143 (MQ=255)                            tgctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGAtttt                                                                                                            >  2:917158/1‑143 (MQ=255)                            tgctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGCCAAGCAGGTTGAttct                                                                                                            >  2:138369/1‑141 (MQ=255)                            tgctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGGGAGTCATTTTTGTCAAGCAGGTTGCtttt                                                                                                            >  1:235236/1‑143 (MQ=255)                            tgctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTCAGTGAAGTCATTTTTGTCAAGCAGGTTGAtgtt                                                                                                            >  1:123717/1‑143 (MQ=255)                            ggctgAATTCAGTGACGGCGAAGGTAAGTTGAGGGGTCAGGATGAACCCTGTTCTATGGCTCCAGATTATAAACATGATATCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTGATTTTTGTCAAGCAGGTTGAtttt                                                                                                            <  1:1018941/142‑1 (MQ=17)                             gctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTg                                                                                                           <  1:187090/143‑1 (MQ=255)                               ttaaggcACTATCTGCGAACGTAAGTTTATCACTCATGATGAACCCTGTTCTATGTCTCCATATGACAAACATTTTCTCATATCAGTGACTTGTTCTCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTa                                                                                                         <  1:472360/137‑1 (MQ=18)                               tgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCATCTAGTTAAAGGAAAAACTACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTa                                                                                                         <  1:503843/143‑1 (MQ=18)                                gAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTaa                                                                                                        >  1:296473/1‑143 (MQ=255)                                  cttCACTGTCGGCTAAGGTAAGTTGATTACTCATGATGATCCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATc                                                                                                      <  1:182289/142‑1 (MQ=255)                                        tGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGAGAAGTCATTTTTGTCCAGCACGTTGATTTTGTAAGCAACGaa                                                                                                >  1:862372/1‑143 (MQ=255)                                         gTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGaaa                                                                                               <  1:420242/143‑1 (MQ=255)                                             gCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGTAGTTCCCACAAAAAACTCATTTTTGTCAAGCAGGTTGATTTTGTAATCACCgtacgtcg                                                                                           >  1:248850/1‑136 (MQ=14)                                             gCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAg                                                                                           >  1:142102/1‑143 (MQ=255)                                              cGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAATCAGGTTGATTTTGTAATCAACGAAAGTAGa                                                                                          <  2:781297/143‑1 (MQ=255)                                              cGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGa                                                                                          >  1:850440/1‑143 (MQ=255)                                              cGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGa                                                                                          <  1:760854/143‑1 (MQ=255)                                               ggaGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTGGAc                                                                                         <  2:982073/141‑1 (MQ=255)                                                 aGGTAAGTTGATGACTCATGATGAACTCTGTTATATGGCTCAAGATGACAAACATGATGTCATATAAAGGACTTGTTCGCACATTACTTACTGAAGTCATTTTTGTAAACAAGGTTAATATTGTAATCAAAGAAAATaaatat                                                                                       >  2:107778/1‑138 (MQ=17)                                                     aaGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATAttt                                                                                   >  1:100708/1‑143 (MQ=255)                                                        ttGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATCACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTttg                                                                                <  1:423067/143‑1 (MQ=255)                                                        gtgatgaCTCATGGTGAACCCTGTTCTGTGGTTCCAGATGACTAACATGATCTCATATCAGGGTCTTGTTCGTACTTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTttg                                                                                <  2:192370/142‑1 (MQ=25)                                                         tgatgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTttgt                                                                               <  1:546633/143‑1 (MQ=255)                                                            tgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGAGTTTGTAATCAACGAAAGTAAACATATTTTTGTTGa                                                                            >  2:28694/1‑143 (MQ=255)                                                             gaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGa‑a                                                                          <  1:663155/143‑1 (MQ=255)                                                             gaCTCATGATGAACCCTGTTCGATGGCTCCGGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTAGTCAAGCAGGTTGATTTTATAATCAACGAAAGTAGACATATTTTTGTTGa‑a                                                                          <  2:573394/143‑1 (MQ=255)                                                              aCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGCTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑Ag                                                                         >  1:457906/1‑143 (MQ=255)                                                                tCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTa                                                                       >  1:1056788/1‑143 (MQ=255)                                                                  atgatgAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAAt                                                                     >  2:566764/1‑143 (MQ=255)                                                                   tgatgaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTCGTTGA‑AGTCATa                                                                    >  2:11731/1‑143 (MQ=255)                                                                   tgatgaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCGAAAAAACCTTCGTTAATGAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAATa                                                                    >  1:504614/1‑143 (MQ=18)                                                                       gaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑CGTAATAggct                                                                >  2:759449/1‑141 (MQ=255)                                                                       gaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAATAGGtt                                                                >  1:556588/1‑143 (MQ=255)                                                                       gaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGATGAGGGTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAATAGGtt                                                                >  1:746018/1‑143 (MQ=255)                                                                        aaCCCTGTTCTATGGCTCCAGATGACAAAAATGATCTCATATCAGGGACTTGTTCGCAACTTCCTTAGTGAAGTCATTTTTGTCACGCAGGTTGATTTTGTAATCAACGAAAGTATCCATATTTTTGTTGA‑AGTAATATGTTg                                                               >  2:421553/1‑143 (MQ=25)                                                                          cccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAATAGGTTGCa                                                             >  1:900228/1‑143 (MQ=255)                                                                           ccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGCTTTTGTAATCAACGAAAGTAGACATCTTCTTGTTGT‑GGGAATAGGTTGCAc                                                            >  1:195824/1‑143 (MQ=25)                                                                           ccTGTTCGATGGCTCCAGATGTCTATCATGGTCTCATATCAGGTCCTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGTAGGCTGATTTTGTAATCAACGAAAGTAGACTTATTTTTGTTGT‑AGTAATAGGTTGccc                                                            <  2:679099/143‑3 (MQ=25)                                                                             tGTTCTATGGCTCCAGATGACAAACATAAGCTCAGATCATGGGCTTGTTCGCACCTTCCTTTGTGAAGTCCTTTTTGTCAAGCAGTTTGCTTTCGTACTCAACGCAAGTAGACATATTTTTGTTGA‑GGTAATAGGTTGCACCt                                                          >  1:809375/1‑143 (MQ=25)                                                                                  tATGGCTCCAGGTGACAAACATCATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAATAGGTTGCACCTACATc                                                     <  2:920846/143‑1 (MQ=255)                                                                                    tGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAATAGGTTGCACCTACATCaa                                                   <  2:248850/143‑1 (MQ=255)                                                                                    tGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAATAGGTTGCACCTACATCaa                                                   >  1:398469/1‑143 (MQ=255)                                                                                     ggCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAATAGGTTGCACCTACATCAAc                                                  <  1:654967/143‑1 (MQ=255)                                                                                           aGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAATAGGTTGCACCTACATCAACATAttt                                            <  2:210021/143‑1 (MQ=255)                                                                                            gATGACAATCTTGTTTTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAATAGGTTGCACCTACATCAACATATTTg                                           <  1:686637/143‑1 (MQ=255)                                                                                             aTGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAATAGGTTGCACCTACATCAACATATTTGa                                          <  2:142102/143‑1 (MQ=255)                                                                                              tGACAAACATGATCTCATATCAGGGACTTGGTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTCTAAA‑AGTAATACGTTGCTCCTACATCAACATATTTGAc                                         <  1:465293/143‑1 (MQ=38)                                                                                              cgACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAATAGGTTGCACCTACATCAACATATTTGAc                                         <  1:858430/142‑1 (MQ=255)                                                                                               gACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAATAGGTTGCACATACATCAACATATTTGACt                                        >  2:839276/1‑143 (MQ=255)                                                                                                 cAAACATGATCTCATATTAGGGATTTGTGTGCATCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAATAGGTTGCACCTACATCAACATATTTGACTaa                                      <  2:689387/143‑1 (MQ=38)                                                                                                  aaaCATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAATAGGTTGCACCTACATCAACATATTTGACTAAg                                     >  1:720215/1‑143 (MQ=255)                                                                                                    aCATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAATAGGTTGCACCTACATCAACATATTTGACTAAGta                                   >  2:824034/1‑142 (MQ=255)                                                                                                           ctcATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAACGTAGGCATATTTTTGTTGA‑AGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATca                            >  2:538681/1‑142 (MQ=255)                                                                                                                  cAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATa                     >  1:1072255/1‑143 (MQ=255)                                                                                                                     ggACTTGTTCGCACCTTCCTTAGTGACGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTc                  >  1:517737/1‑143 (MQ=255)                                                                                                                     ggACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATAGTc                  >  1:900919/1‑143 (MQ=255)                                                                                                                       aCTTGTTCGCACCTTCTTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCa                <  2:520998/143‑1 (MQ=255)                                                                                                                         ttGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAg              >  1:961777/1‑143 (MQ=255)                                                                                                                              cGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCt         >  1:890362/1‑143 (MQ=255)                                                                                                                               gCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAAAGAAAGTAGACATATTTTTGTTGA‑AGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTACTGATCGCCACATACTCCAAGATCCtt        >  2:642434/1‑143 (MQ=255)                                                                                                                                   cttccttAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCt    >  2:68772/1‑143 (MQ=255)                                                                                                                                    ttccttAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAAGGGAAGAGCACGGATGTTTGTTGTTAGCAA‑AGCGCTCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCtt   >  1:803254/1‑143 (MQ=255)                                                                                                                                     tccttAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTATAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAATAGGTTGCACCTACATCAACATATTTGCATAAATAATGATCGCAACATACTTCAAGATCCTTAccaat  >  2:520225/1‑140 (MQ=255)                                                                                                                                       |                                                                                                                                              TCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGA‑AGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTT  >  NC_000913/575651‑575925

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.