New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 56582864 (1.060)7 (0.120) 5/284 8.1 9.9% coding (151/1164 nt) intD DLP12 prophage; putative phage integrase
?NC_000913 = 575785 NA (NA)noncoding (1/1195 nt) IS5 repeat region
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTT  >  NC_000913/575651‑575925
                                                                                                                                      |                                                                                                                                             
tctgTTTGCTGGTCTGACGGCGCGTACTGCTGAATTCACTGTCGGCGAAGGTAAGGTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGaa                                                                                                                                       <  2:641999/143‑1 (MQ=255)
 ctctTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAg                                                                                                                                      >  1:1001047/1‑143 (MQ=32)
    ttttCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCa                                                                                                                                   >  1:486140/1‑143 (MQ=35)
         tGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCAttttt                                                                                                                              <  1:1036464/143‑1 (MQ=39)
         tGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCAttttt                                                                                                                              <  2:483089/143‑1 (MQ=39)
         cagTCTGCCGGCGCGAACTGCCGAATTCACGGCCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCAttttt                                                                                                                              <  1:824106/141‑1 (MQ=14)
           gTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGt                                                                                                                            <  1:467816/143‑1 (MQ=40)
           gTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGt                                                                                                                            <  1:365443/143‑1 (MQ=40)
            tCTGACGGCGCTTACTGCTGAAGTCACTGTAGGCGAAGGTAAGTTGATGAATCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATCTCAAGGACGTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTc                                                                                                                           <  2:278382/143‑1 (MQ=14)
               gACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGAGCTCATCTCAGCGACTTCTTCGCACCTTCCTTAGTGAAGTCATTTTTGGCAAg                                                                                                                        >  1:37663/1‑143 (MQ=14)
                aCGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGc                                                                                                                       <  1:594708/143‑1 (MQ=255)
                aCGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGc                                                                                                                       <  2:490268/143‑1 (MQ=255)
                aCGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGc                                                                                                                       >  1:922065/1‑143 (MQ=255)
                       ttACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGa                                                                                                                >  1:64745/1‑143 (MQ=255)
                           tgctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGAtttt                                                                                                            >  2:917158/1‑143 (MQ=255)
                           tgctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGCCAAGCAGGTTGAttct                                                                                                            >  2:138369/1‑141 (MQ=255)
                           tgctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGGGGAGTCATTTTTGTCAAGCAGGTTGCtttt                                                                                                            >  1:235236/1‑143 (MQ=255)
                           tgctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTCAGTGAAGTCATTTTTGTCAAGCAGGTTGAtgtt                                                                                                            >  1:123717/1‑143 (MQ=255)
                           ggctgAATTCAGTGACGGCGAAGGTAAGTTGAGGGGTCAGGATGAACCCTGTTCTATGGCTCCAGATTATAAACATGATATCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTGATTTTTGTCAAGCAGGTTGAtttt                                                                                                            <  1:1018941/142‑1 (MQ=17)
                            gctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTg                                                                                                           <  1:187090/143‑1 (MQ=255)
                              ttaaggcACTATCTGCGAACGTAAGTTTATCACTCATGATGAACCCTGTTCTATGTCTCCATATGACAAACATTTTCTCATATCAGTGACTTGTTCTCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTa                                                                                                         <  1:472360/137‑1 (MQ=18)
                              tgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCATCTAGTTAAAGGAAAAACTACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTa                                                                                                         <  1:503843/143‑1 (MQ=18)
                               gAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTaa                                                                                                        >  1:296473/1‑143 (MQ=255)
                                 cttCACTGTCGGCTAAGGTAAGTTGATTACTCATGATGATCCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATc                                                                                                      <  1:182289/142‑1 (MQ=255)
                                       tGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGAGAAGTCATTTTTGTCCAGCACGTTGATTTTGTAAGCAACGaa                                                                                                >  1:862372/1‑143 (MQ=255)
                                        gTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGaaa                                                                                               <  1:420242/143‑1 (MQ=255)
                                            gCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGTAGTTCCCACAAAAAACTCATTTTTGTCAAGCAGGTTGATTTTGTAATCACCgtacgtcg                                                                                           >  1:248850/1‑136 (MQ=14)
                                            gCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAg                                                                                           >  1:142102/1‑143 (MQ=255)
                                             cGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAATCAGGTTGATTTTGTAATCAACGAAAGTAGa                                                                                          <  2:781297/143‑1 (MQ=255)
                                             cGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGa                                                                                          >  1:850440/1‑143 (MQ=255)
                                             cGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGa                                                                                          <  1:760854/143‑1 (MQ=255)
                                              ggaGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTGGAc                                                                                         <  2:982073/141‑1 (MQ=255)
                                                aGGTAAGTTGATGACTCATGATGAACTCTGTTATATGGCTCAAGATGACAAACATGATGTCATATAAAGGACTTGTTCGCACATTACTTACTGAAGTCATTTTTGTAAACAAGGTTAATATTGTAATCAAAGAAAATaaatat                                                                                       >  2:107778/1‑138 (MQ=17)
                                                    aaGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATAttt                                                                                   >  1:100708/1‑143 (MQ=255)
                                                       ttGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATCACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTttg                                                                                <  1:423067/143‑1 (MQ=255)
                                                       gtgatgaCTCATGGTGAACCCTGTTCTGTGGTTCCAGATGACTAACATGATCTCATATCAGGGTCTTGTTCGTACTTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTttg                                                                                <  2:192370/142‑1 (MQ=25)
                                                        tgatgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTttgt                                                                               <  1:546633/143‑1 (MQ=255)
                                                           tgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGAGTTTGTAATCAACGAAAGTAAACATATTTTTGTTGa                                                                            >  2:28694/1‑143 (MQ=255)
                                                            gaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGaa                                                                          <  1:663155/143‑1 (MQ=255)
                                                            gaCTCATGATGAACCCTGTTCGATGGCTCCGGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTAGTCAAGCAGGTTGATTTTATAATCAACGAAAGTAGACATATTTTTGTTGaa                                                                          <  2:573394/143‑1 (MQ=255)
                                                             aCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGCTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAg                                                                         >  1:457906/1‑143 (MQ=255)
                                                               tCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTa                                                                       >  1:1056788/1‑143 (MQ=255)
                                                                 atgatgAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAAt                                                                     >  2:566764/1‑143 (MQ=255)
                                                                  tgatgaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTCGTTGAAGTCATa                                                                    >  2:11731/1‑143 (MQ=255)
                                                                  tgatgaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCGAAAAAACCTTCGTTAATGAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATa                                                                    >  1:504614/1‑143 (MQ=18)
                                                                      gaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGACGTAATAggct                                                                >  2:759449/1‑141 (MQ=255)
                                                                      gaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGtt                                                                >  1:556588/1‑143 (MQ=255)
                                                                      gaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGATGAGGGTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGtt                                                                >  1:746018/1‑143 (MQ=255)
                                                                       aaCCCTGTTCTATGGCTCCAGATGACAAAAATGATCTCATATCAGGGACTTGTTCGCAACTTCCTTAGTGAAGTCATTTTTGTCACGCAGGTTGATTTTGTAATCAACGAAAGTATCCATATTTTTGTTGAAGTAATATGTTg                                                               >  2:421553/1‑143 (MQ=25)
                                                                         cccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCa                                                             >  1:900228/1‑143 (MQ=255)
                                                                          ccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGCTTTTGTAATCAACGAAAGTAGACATCTTCTTGTTGTGGGAATAGGTTGCAc                                                            >  1:195824/1‑143 (MQ=25)
                                                                          ccTGTTCGATGGCTCCAGATGTCTATCATGGTCTCATATCAGGTCCTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGTAGGCTGATTTTGTAATCAACGAAAGTAGACTTATTTTTGTTGTAGTAATAGGTTGccc                                                            <  2:679099/143‑3 (MQ=25)
                                                                            tGTTCTATGGCTCCAGATGACAAACATAAGCTCAGATCATGGGCTTGTTCGCACCTTCCTTTGTGAAGTCCTTTTTGTCAAGCAGTTTGCTTTCGTACTCAACGCAAGTAGACATATTTTTGTTGAGGTAATAGGTTGCACCt                                                          >  1:809375/1‑143 (MQ=25)
                                                                                 tATGGCTCCAGGTGACAAACATCATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATc                                                     <  2:920846/143‑1 (MQ=255)
                                                                                   tGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCaa                                                   <  2:248850/143‑1 (MQ=255)
                                                                                   tGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCaa                                                   >  1:398469/1‑143 (MQ=255)
                                                                                    ggCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAAc                                                  <  1:654967/143‑1 (MQ=255)
                                                                                          aGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATAttt                                            <  2:210021/143‑1 (MQ=255)
                                                                                           gATGACAATCTTGTTTTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTg                                           <  1:686637/143‑1 (MQ=255)
                                                                                            aTGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGa                                          <  2:142102/143‑1 (MQ=255)
                                                                                             tGACAAACATGATCTCATATCAGGGACTTGGTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTCTAAAAGTAATACGTTGCTCCTACATCAACATATTTGAc                                         <  1:465293/143‑1 (MQ=38)
                                                                                             cgACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGAc                                         <  1:858430/142‑1 (MQ=255)
                                                                                              gACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACATACATCAACATATTTGACt                                        >  2:839276/1‑143 (MQ=255)
                                                                                                cAAACATGATCTCATATTAGGGATTTGTGTGCATCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTaa                                      <  2:689387/143‑1 (MQ=38)
                                                                                                 aaaCATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAg                                     >  1:720215/1‑143 (MQ=255)
                                                                                                   aCATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGta                                   >  2:824034/1‑142 (MQ=255)
                                                                                                          ctcATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAACGTAGGCATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATca                            >  2:538681/1‑142 (MQ=255)
                                                                                                                 cAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATa                     >  1:1072255/1‑143 (MQ=255)
                                                                                                                    ggACTTGTTCGCACCTTCCTTAGTGACGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTc                  >  1:517737/1‑143 (MQ=255)
                                                                                                                    ggACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATAGTc                  >  1:900919/1‑143 (MQ=255)
                                                                                                                      aCTTGTTCGCACCTTCTTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCa                <  2:520998/143‑1 (MQ=255)
                                                                                                                        ttGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAg              >  1:961777/1‑143 (MQ=255)
                                                                                                                             cGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCt         >  1:890362/1‑143 (MQ=255)
                                                                                                                              gCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAAAGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTACTGATCGCCACATACTCCAAGATCCtt        >  2:642434/1‑143 (MQ=255)
                                                                                                                                  cttccttAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCt    >  2:68772/1‑143 (MQ=255)
                                                                                                                                   ttccttAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAAGGGAAGAGCACGGATGTTTGTTGTTAGCAAAGCGCTCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCtt   >  1:803254/1‑143 (MQ=255)
                                                                                                                                    tccttAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTATAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGCATAAATAATGATCGCAACATACTTCAAGATCCTTAccaat  >  2:520225/1‑140 (MQ=255)
                                                                                                                                      |                                                                                                                                             
TCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGAAGTCATTTTTGTCAAGCAGGTTGATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTT  >  NC_000913/575651‑575925

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.