| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 258675 | NA (NA) | 35 (0.740) | 31/280 | 0.6 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 1306932 = | 0 (0.000) | coding (219/330 nt) | yciU | UPF0263 family protein | |||||
CGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/258535‑258675‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGAACAGCAGAACATCAGCTGGATCGAGATTGTCG > NC_000913/1306932‑1307070 CGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGCACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCCAAAACACCGTCATACACTAAATCGGTAAGTTGGCAGCATCACCCA > 1:671352/1‑143 TCCGGCGGTGCGTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACTTCGGCA < 1:307109/143‑1 ggTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACTCCATCATACACGAGATAAGTAAGTTGGCGGCATCACCCACTTCGGCAAAAAAGTCCGG < 2:718846/141‑1 TGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACTTCGGCAAAAAAGTCCGGGTT < 1:418368/143‑1 CCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACTTCGGCAAAAAAGTCCGGGTTCA > 1:518748/1‑143 ACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACTTCGGCGAGACAGTCCGGGTTCAAATCGACAT > 1:218293/1‑143 CACCCCGGCAGTAGATGAAGAGGAGGGACAGATGAGAGAAACAGAAGCCACTGAAGCACCACAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCA < 2:526104/143‑1 GTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGT < 1:532538/143‑1 AGCTGAACAGGAGGGACAGCTGAGAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGC < 2:369123/143‑1 GCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCGCTGGAGCACCTCAAAAACACCATCATACACTAAAGCAGTAAGTTGGCAGCATCACCCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCC < 2:393605/143‑1 GACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGG < 1:864776/143‑1 ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAAAATGTACAAACCAGTCTTCCGCCGGA > 1:361252/1‑143 TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAA < 1:701511/143‑1 TGATAGAAACAGAAGCCACTGGAGCACCCCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAA < 2:681562/143‑1 GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGC > 1:520640/1‑143 CACTGTAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACTGCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCG < 2:539942/143‑1 GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACTTCGGCAAAAAAGTACGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTC > 1:449510/1‑143 CACGTCAAAAACACCATCATACACTAGAGCAGTAAGTTGGCAGCATCACCCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTC < 2:363056/143‑1 CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGGATCACCCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCTGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAA > 1:606259/1‑143 cgCAAAGACACGATCATACTGTGCAGCAGTAAGTTGGCCGCAGCACCCACTTCGGCAAAAAAGTCCGGGTTCAAAGCGAAATCAACAGGTTCCTGCCAGTCGTCCGCCGGACCGAATAACTCCGCGCCGCCGCGCTCTTCAAA < 2:125350/141‑1 CTCAAAAACACCATCACCCACGTAATCAGTAAGTTGGCAGCATCACCCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAA < 1:26185/143‑1 TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAGCTCCGCGCCGCCGCGCTCTTCAGAC > 1:541799/1‑143 TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCACAC > 1:218060/1‑143 TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAAC < 1:642500/143‑1 AACCCCATCATACACTAAAGCAGTAAGCTGGCAGCATCACCCACTTCAGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAG < 1:665383/143‑1 ACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCGGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGA < 1:620651/143‑1 gCCAGCATACACTGAAGCAGTAAGTTGGCAGCATCACCCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATT < 1:608739/142‑1 cctcAAATCAGTAAGTTGGCTGCAGCGCCCATGTCGGCAAAAGTGTCCGGGTTCAAGTCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGAACAGCAG < 2:748046/139‑1 CAGTAAGTTGGCAGCATCACCCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGAACAGCGGAACATCAG < 1:542469/143‑1 AGTAAGTTGGCAGCATCACCCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGAACAGCAGAACATCAGC < 2:368738/143‑1 ttgggTGGCAGGATCAGCCGCTTCGGCAAAAGAGTCCGGGTGCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCGGGATCGAGTAACGCCGCGCCGCAGCGCTCTTCAAACTGAAGATTGAACAGCAGAACATCAGCTG < 2:32366/138‑1 GCAGCATCACCCACTTCGGCAAAAAAGTCCGGGTTCAAATCGCAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGAACAGCAGAACATCAGCTGGATCGAG < 1:303147/143‑1 GCAGCATCACCCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGAACAGCAGAACATCAGCTGGAgtgag > 1:438999/1‑138 ATCGCCCACTTCGGCAAACAAGTCCGGGGTCAAATGGAACTCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGAACAGCAGAACATCAGCTGGATCGAGATTGT < 2:118623/143‑1 CACCCACTTCGGCAAAAAAGTCCGGGTTCAAATCGACATCAACAGGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGAACAGCAGAACATCAGCTGGATCGAGATTGTCG < 1:279424/143‑1 CGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/258535‑258675‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGAACAGCAGAACATCAGCTGGATCGAGATTGTCG > NC_000913/1306932‑1307070 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |