| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 258675 | NA (NA) | 35 (0.740) | 31/280 | 0.6 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 1306932 = | 0 (0.000) | coding (219/330 nt) | yciU | UPF0263 family protein | |||||
TCAGCCCTTTTTCACGCTAAAAGCGATTATTTATTCCCGCCAGATGATATGGCAAAGTTTGTGATCTTTTTCGCGGCATAACAGAATGCGGGCAAAAACATCGTTGATTTCACCATCTTCACTGTCCGCCAGACCAATCACCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGAACAGCAGAACATCAGCTGGATCGAGATTGTCGG > NC_000913/1306791‑1307071 | cgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgcacaggagggacagctgatagaaacagaagccactggagcacctccaaaacaccgtcatacactaaatcggtaagttggcagcatcaccCa > 1:671352‑M2/142‑143 (MQ=255) tccggcggtgcgtttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCACTTCGGCa < 1:307109‑M2/10‑1 (MQ=255) ggttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaactccatcatacacgagataagtaagttggcggcatcaccCACTTCGGCAAAAAAGTCCgg < 2:718846‑M2/21‑1 (MQ=255) tgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCACTTCGGCAAAAAAGTCCGGGtt < 1:418368‑M2/24‑1 (MQ=255) ccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCACTTCGGCAAAAAAGTCCGGGTTCa > 1:518748‑M2/118‑143 (MQ=255) accaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCACTTCGGCGAGACAGTCCGGGTTCAAATCGACAt > 1:218293‑M2/109‑143 (MQ=255) caccccggcagtagatgaagaggagggacagatgagagaaacagaagccactgaagcaccacaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCa < 2:526104‑M2/37‑1 (MQ=255) gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGt < 1:532538‑M2/43‑1 (MQ=255) agctgaacaggagggacagctgagagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGc < 2:369123‑M2/49‑1 (MQ=255) gctgaacaggagggacagctgatagaaacagaagccgctggagcacctcaaaaacaccatcatacactaaagcagtaagttggcagcatcaccCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGcc < 2:393605‑M2/50‑1 (MQ=255) gacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCgg < 1:864776‑M2/63‑1 (MQ=255) acagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAAAATGTACAAACCAGTCTTCCGCCGGa > 1:361252‑M2/80‑143 (MQ=255) tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGaa < 1:701511‑M2/69‑1 (MQ=255) tgatagaaacagaagccactggagcaccccaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGaa < 2:681562‑M2/69‑1 (MQ=255) gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGcgccgc > 1:520640‑M2/61‑143 (MQ=255) cactgtagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCACTGCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGcgccgccg < 2:539942‑M2/85‑1 (MQ=255) gagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCACTTCGGCAAAAAAGTACGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGctc > 1:449510‑M2/54‑143 (MQ=255) cacgtcaaaaacaccatcatacactagagcagtaagttggcagcatcaccCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTc < 2:363056‑M2/93‑1 (MQ=255) cctcaaaaacaccatcatacactaaatcagtaagttggcaggatcaccCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCTGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCaa > 1:606259‑M2/49‑143 (MQ=255) ctcaaaaacaccatcacccacgtaatcagtaagttggcagcatcaccCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCaaa < 1:26185‑M2/96‑1 (MQ=255) cgcaaagacacgatcatactgtgcagcagtaagttggccgcagcaccCACTTCGGCAAAAAAGTCCGGGTTCAAAGCGAAATCAACAGGTTCCTGCCAGTCGTCCGCCGGACCGAATAACTCCGCGCCGCCGCGCTCTTCaaa < 2:125350‑M2/96‑1 (MQ=255) tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAGCTCCGCGCCGCCGCGCTCTTCAGAc > 1:541799‑M2/47‑143 (MQ=255) tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCacac > 1:218060‑M2/47‑143 (MQ=255) tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAAc < 1:642500‑M2/97‑1 (MQ=255) aaccccatcatacactaaagcagtaagctggcagcatcaccCACTTCAGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAg < 1:665383‑M2/102‑1 (MQ=255) acaccatcatacactaaatcagtaagttggcagcatcaccCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCGGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGa < 1:620651‑M2/103‑1 (MQ=255) gccagcatacactgaagcagtaagttggcagcatcaccCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGAtt < 1:608739‑M2/105‑1 (MQ=255) cctcaaatcagtaagttggctgcagcgccCATGTCGGCAAAAGTGTCCGGGTTCAAGTCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGAAcagcag < 2:748046‑M2/114‑1 (MQ=255) cagtaagttggcagcatcaccCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGAACAGCGGAACATCAg < 1:542469‑M2/122‑1 (MQ=255) agtaagttggcagcatcaccCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGAACAGCAGAACATCAGc < 2:368738‑M2/123‑1 (MQ=255) ttgggtggcaggatcagcCGCTTCGGCAAAAGAGTCCGGGTGCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCGGGATCGAGTAACGCCGCGCCGCAGCGCTCTTCAAACTGAAGATTGAACAGCAGAACATCAGCTg < 2:32366‑M2/125‑1 (MQ=255) gcagcatcaccCACTTCGGCAAAAAAGTCCGGGTTCAAATCGCAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGAACAGCAGAACATCAGCTGGATCgag < 1:303147‑M2/132‑1 (MQ=255) gcagcatcaccCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGAACAGCAGAACATCAgctggagtgag > 1:438999‑M2/12‑138 (MQ=255) atcgccCACTTCGGCAAACAAGTCCGGGGTCAAATGGAACTCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGAACAGCAGAACATCAGCTGGATCGAGATTGt < 2:118623‑M2/137‑1 (MQ=255) caccCACTTCGGCAAAAAAGTCCGGGTTCAAATCGACATCAACAGGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGAACAGCAGAACATCAGCTGGATCGAGATTGTCg < 1:279424‑M2/139‑1 (MQ=255) acccacTTCGGCAAAAAAAGGCGGGTTCAAATCGAAATCAACATGTTACTGCCAGTCTTACGCCGGATCGAATAAATCCGCGCCGCCGCGCACCTCAAACTGAAGATTGAACAGCAGAAACGCACCTGGATAGAGATTGGCgc > 2:314856/3‑142 (MQ=255) | TCAGCCCTTTTTCACGCTAAAAGCGATTATTTATTCCCGCCAGATGATATGGCAAAGTTTGTGATCTTTTTCGCGGCATAACAGAATGCGGGCAAAAACATCGTTGATTTCACCATCTTCACTGTCCGCCAGACCAATCACCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGAACAGCAGAACATCAGCTGGATCGAGATTGTCGG > NC_000913/1306791‑1307071 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |