New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1939099 =	NA (NA)	3 (0.070)	3/266	7.2	NA	noncoding (1/30 nt)	REP137 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP137 (repetitive extragenic palindromic) element; contains 1 REP sequences
	?	NC_000913	1939129 =	NA (NA)					intergenic (+38/+93)	pykA/lpxM	pyruvate kinase II/myristoyl‑acyl carrier protein (ACP)‑dependent acyltransferase
Rejected: Coverage evenness skew score above cutoff.

AAAGATCTTTATCCCATCAAATAAAAAAGCCTCTCGCGAGGAGAGGCCTTCGCCTGATGATAAGTTCAAGTTTGCTTCAGAATATTCGAAATCTGTTGAACTATCATTGAACTGTAGGCCGGATGTGGCGTTTTCGCCGCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1939245‑1939099 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catccggcCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTG‑AACTTATCATCAGGCGAAGGCCTCTCCTCGCGAGAGGCTTTTTTATTTGATGGGATAAAGATCTTTGCGCTTATACGGCTGGATTTC  >  NC_000913/1939129‑1939266                                                                                                                                                                                                                                                                                                AAAGATCTTTATCCCATCAAATAAAAAAGCCTCTCGCGAGGAGAGGCCTTCGCCTGCTGATAAGTTCACGCTTGCTTCAGACCATTCGAACTCTGTTGAACTATCAATGACCTGTAGGCCGCAAGTGGCGTTTTCGCCCCATC                                                                                                                                                 >  2:33556/1‑143    GATCTTTATCCCATCAAATAAAAAAGCCTCTCGCGAGGAGAGGCCTTCGCCTGATGATAAGTTCAAGTTTGCTTCAGAATATTCGAAATCTGTTGAACTATCATTGAACTGTAGGCCGGATGTGGCGTTTTCGCCGCATCCGG                                                                                                                                              <  2:837976/143‑1                                                                                        GAAATCTGTTGAACTATCATTGAACTGTAGGCCGGATGTGGCGTTTTCGCCGCATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTG‑AACTTATCATCAGGCGAAGGCCTCTCCTCGCG                                                         >  2:682947/1‑143                                                                                                      TATCATTGAACTGTAGGCCGGATGTGGCGTTTTCGCCGCATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTG‑AACTTATCATCAGGCGAAGGCCTCTCCTCCCGAGAGGCTTTCTTAT                                           >  2:197251/1‑143                                                                                                                           ATGTGGCGTTTTCGCCGCATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTG‑AACTTATCATCAGGCGAAGGCCTCTCCTCGCGAGAGGCTTTTTTATTTGATGGGATAAAGATCTTTG                      >  2:296842/1‑143                                                                                                                                               CCGGCCTACATTTCAATTATAGTTCAGCAGATTTCGCATATTCTGACG‑AAACAAGTGCCTTATCATCAGGCGAAGGCCTCTCCTCGCGAGAGGCTTTTTTATTTGATGGGATAAATATCTTTGCGCTTATACGGCTGGATTTC  <  2:100431/143‑1                                                                                                                                                                                                                                                                                                AAAGATCTTTATCCCATCAAATAAAAAAGCCTCTCGCGAGGAGAGGCCTTCGCCTGATGATAAGTTCAAGTTTGCTTCAGAATATTCGAAATCTGTTGAACTATCATTGAACTGTAGGCCGGATGTGGCGTTTTCGCCGCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1939245‑1939099 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catccggcCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTG‑AACTTATCATCAGGCGAAGGCCTCTCCTCGCGAGAGGCTTTTTTATTTGATGGGATAAAGATCTTTGCGCTTATACGGCTGGATTTC  >  NC_000913/1939129‑1939266

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.