| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,909,312 | Δ774 bp | [pstA]–[pstC] | [pstA], [pstC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3909312 | 3910085 | 774 | 25 [0] | [0] 25 | [pstA]–[pstC] | [pstA],[pstC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3909311 | 0 (0.000) | 22 (0.800) | 21/270 | 0.3 | 100% | coding (129/891 nt) | pstA | phosphate ABC transporter permease |
| ? | NC_000913 | 3910086 = | 0 (0.000) | coding (313/960 nt) | pstC | phosphate ABC transporter permease | |||||
CACAAAATTAACAGCCCGCTACCCGCCAGAGCGTTCGCCAGACCACCACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3909165‑3909311‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccagGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTC > NC_000913/3910086‑3910225 CACAAAATTAACAGCCCGCTACCCGCCAGAGCGTTCGCCAGACCACCACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAG < 1:366590/143‑1 ATTAACAGCCCGCTACCCGCCAGAGCGTTCGCCAGACCACCACCTTCCGCATTGGGCGGCGGCGTCATATCAGTGGACAGCGCCAGCGACATACCGCCGATACGGAGAGTGAGGAGGCACATTAAAATCACGACCAGCCAGGC > 2:190370/1‑143 CCGCTACCCGCCAGAGCGTTCGCCAGACCACCACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGAACGCCACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCA < 2:252987/143‑1 AGAGCGTTCGCCAGACCACCACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGG < 1:89671/143‑1 AGCGTTCGCCAGCCCACCACCGTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGC < 2:76091/143‑1 CAGACCACCACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGACCAGGGCGATACCGAA > 2:340746/1‑143 CCACCTTCCGTATTGGTCGGCGGCGTCATTTCAGTTAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAACATCCCGATCAGCCAGGCGCACGCTCAGTCAGGAACAGGGCGATACCGAAACTCACC < 2:346294/143‑1 CACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTAAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCCAAACTCACCG > 2:133078/1‑143 gTTGGGCGGCGGCGTCATTGCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGAT < 1:211083/142‑1 ATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGCAACTCACCGGGACGGCGAT > 2:181401/1‑143 ATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGGCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGAT < 1:64167/143‑1 TGGGCGGTGGCGTCATTTTAGTGAACAGCGCCAGCGACGTACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGGTCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCA < 2:350383/143‑1 CGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGACAAGGACCATACCGAAACTCACCAGGACGGCGATCAGCAG > 2:422764/1‑143 TTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGACACTCACCGGGACGGCCATCAGCAGCGCGCTAGACG > 2:462892/1‑143 gcaAGCGTCTTACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTA < 1:293925/140‑1 CCAGCGTCATACCGTCGATAGCGCGAGGGAGGGTGGACATTAAAAGCCATATGGGCCAGGCGCAAGCTCCGTCAGGAACGGGGTGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTAC < 2:523937/143‑1 CGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGACCAGGGCGATACCGAAACTCACCGAGAAGTAGTTCAGCAGCGCGATAAACGAAGTCACCATCGTACCGTAGATAGGCA > 1:219244/1‑143 TCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATAACGAAATTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCGGCAACGTACCGTAGATCGGCACC > 1:263248/1‑143 TGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGAAGACAT > 2:428072/1‑143 ATTAAAATCAAGATCAGCGTGTCGCAAGCTTAGTCAGCAACAGGGCGATACCGAAACTCACCGGGACGGCGCTCAGCAGCGCGATAAACGAAGCCACCACCGTACCGTAGATCGGCACCAGCGCCCCGTAGAACTCGTgccgc > 2:347357/1‑138 taacgTCCGGATCAGCCACGCGCAAGCTCCGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGC < 1:188913/138‑1 AAATCCAGATCAGCCAGTCGCAAGCTCAGTCAGGAACAGGGCGATCACCAATCTCACCGAAACGATGGACAGCAGTACTATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCAT < 1:266795/143‑1 CAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTCGATATCGATCGGTGCATCCCAC > 2:411717/1‑143 GCCAGGCGCAAGCTCAGTCAGGAGCAGGGCGATACCGATCCGCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGG < 1:166096/143‑1 GCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGG < 1:232001/143‑1 CAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGAGCGAGGAACGGGGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTC > 1:471689/1‑143 CACAAAATTAACAGCCCGCTACCCGCCAGAGCGTTCGCCAGACCACCACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3909165‑3909311‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccagGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTC > NC_000913/3910086‑3910225 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |