Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 3,909,312 Δ774 bp [pstA][pstC] [pstA], [pstC]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3909312 3910085 774 13 [0] [2] 15 [pstA]–[pstC] [pstA],[pstC]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 39093110 (0.000)11 (0.580) 11/270 0.6 91.7% coding (129/891 nt) pstA phosphate ABC transporter permease
?NC_000913 3910086 = 2 (0.110)coding (313/960 nt) pstC phosphate ABC transporter permease

ATATTGCCGACCGGCTCCTGAAAGTAAACGGCGAACAGCGGCGCAAAGATAAACAGGCCCCACATGCCGTAAACGATACTTGGAATGGCTGCCAGCAGCTCAATGGCGATACCCAGCGGGCGTTTCAGCCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGT  >  NC_000913/3909950‑3910224
                                                                                                                                        |                                                                                                                                          
cagcccgctacccgccagagcgttcgccagaccaccacctgccgtattgggcggcggcgtcattccagtgaacagcgccagcgacataccgtcgataccgcgcgtgatggtggacattaaaatccagatcagccagGCGCAAg                                                                                                                                      >  2:115479‑M2/137‑143 (MQ=255)
              caagtgcgttcgccccaccaccaccttccttattggtcggcggcgtcatttcagtgaacagcgccagcgacataccgtcgataccgcgagtgatggtggacattaaaatccagatcagccagGCGCAAGCTCAGTCAGGAACa                                                                                                                        <  2:68055‑M2/21‑1 (MQ=255)
                                      cttccgtattgggcggcggcgtcatttcagtgaacagcgccagcgacataccgtcgataccgcgagtgatggtggacataaaaatccagatcagccagGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGa                                                                                                >  1:223257‑M2/99‑143 (MQ=255)
                                             atttggctgcggcgtcatttctgtgaatttcttttgcgacatagcttcgataccgcgagagatggtggacattaaaagccagatcagccagGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGAt                                                                                         <  1:259294‑M2/52‑1 (MQ=255)
                                                  gcggcggcgtcatttcagtgaacagcgccagcgacattccgtctataccgcgagtgattgtggacattaaaggccagatcagccagGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATcagca                                                                                    <  1:181820‑M2/57‑1 (MQ=255)
                                                        gcgtcgtttcagtgaacagcgccagcgacataccgtcgataccgcgagtggtggtggacattaaaatcccgatcagccagGCGCAAGCTCAGTCAGGTACAGGGCGATCCCGAAACTCACCGGGACGGCGATCAGCAGCGCGa                                                                              <  1:106724‑M2/63‑1 (MQ=255)
                                                                           cgccagcgacataccgtcgataccgcgagtgatggtggacattaaaatccagatcagccagGCGCAAGCTCAGTCAGGCACAGGCCGATACCGAAACTCAACGGGACAGCGATCAACAGCGCGATAAAAGAAGTAACAaacaa                                                           >  1:165598‑M2/62‑141 (MQ=255)
                                                                                       accgtcgataccgcgagtgatggtggacattaaaatccagctcagccagGCGCACGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGAAACGGCAATCAGCAGCGCGATAAACGAAGTCAACAACGTACCGTAGATCgg                                               >  1:36128‑M2/50‑143 (MQ=255)
                                                                                        ccgtcgataccgcgagtgatggtggacattaaaatccagatcagccagGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCCAACACCAACACGATAAACAAAGAAACCAAAGTAACGTAAATCGGc                                              >  1:81225‑M2/49‑143 (MQ=255)
                                                                                                 ccgcgagtgatggtggacattaaaatccagatcagccagGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCGCAGGATCGTAGATCGGCACCAGCGcc                                     <  2:227981‑M2/104‑1 (MQ=255)
                                                                                                         gatggtcgacattaatattcatatcagctagTCTCAATCTCATTCTTGAACAGGGCGATACCGAAACTAACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGat                             <  1:44341‑M2/112‑1 (MQ=255)
                                                                                                                ccAGCGGGCGTTTCAGCCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGCTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGtcc                      >  2:347211/1‑141 (MQ=255)
                                                                                                                                gcagccagGCGCGAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCtt      <  1:385806‑M2/135‑1 (MQ=255)
                                                                                                                                ccagccagGCGCAAGCTCAGTCAGGAACAGGGCGATACAGAAACTCACCGGGTCGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCtt      <  1:285731/143‑1 (MQ=255)
                                                                                                                                    ccagGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGCAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATAGATCGGTACATCACACCCTTTGGt  >  1:211945‑M2/5‑143 (MQ=255)
                                                                                                                                        |                                                                                                                                          
ATATTGCCGACCGGCTCCTGAAAGTAAACGGCGAACAGCGGCGCAAAGATAAACAGGCCCCACATGCCGTAAACGATACTTGGAATGGCTGCCAGCAGCTCAATGGCGATACCCAGCGGGCGTTTCAGCCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGT  >  NC_000913/3909950‑3910224

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.