| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2884485 = | 55 (1.110) | 3 (0.070) | 3/248 | 7.0 | 5.8% | intergenic (‑347/+68) | casA/ygcB | CRISP RNA (crRNA) containing Cascade antiviral complex protein/Cascade complex anti‑viral R‑loop helicase‑annealase Cas3 |
| ? | NC_000913 | 2884503 = | 49 (1.140) | intergenic (‑365/+50) | casA/ygcB | CRISP RNA (crRNA) containing Cascade antiviral complex protein/Cascade complex anti‑viral R‑loop helicase‑annealase Cas3 | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGGATGGGTCTGGCAGGGTAACAGTATTGTTATTACCTATACAGGGGATGAAGGGATGACCAGAGTCATCCCTGCAAATCCCAAATAACTTCGGGAATGATTGTTATCAATGACGATAATAAGACCAATAACGGTTTATCCCTACTTAAGTAGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2884640‑2884485‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccctacttaagtagggaTAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCAT > NC_000913/2884503‑2884637 TGGATGGGTCTGGCAGGGTAACAGTATTGTTATTACCTATACAGGGGATGAAGGGATGACCAGAGTCATCCCTGCAAATCCCAAATAACTTCGGGAATGATTGTTATCAATGACGATAATAAGACCAATAACGGTTTATCCCT < 2:269598/143‑1 ATGGGTCTGGCAGGGTAACAGTATTGTTATTACCTATACAGGGGATGAAGGGATGACCAGAGTCATCCCTGCAAATCCCAAATAACTTCGGGAATGATTGTTATCAATGACGATAATAAGACCAATAACGGTTTATCCCTACT > 1:861338/1‑143 GGTCTGGCAGGGTAACAGTATTGTTATTACCTATACAGGGGATGAAGGGATGACCAGAGTCATCCCTGCAAATCCCAAATAACTTCGGGAATGATTGTTATCAATGACGATAATAAGACCAATACAGGTTGATCCCTACTTAA > 2:99705/1‑143 TGGCAGGGTAACAGTATTGTTATTACCTATACAGGGGATGAAGGGATGACCAGAGTCATCCCTGCAAATCCCAAATAACTTCGGGAATGATTGTTATCAATGACGATAATAAGACCAATAACGGTTTATCCCTACTTAAGTAG > 2:488189/1‑143 AGGGTAACAGTATTGTTATTAACTATACAGGGGATGAAGGGATGACCAGAGTCATCCCTGCAAATCCCAAATAACTTCGGGAATGATTGTTATCAATGACGATAATAAGACCAATAACGGTTTATCCCTACTTAAGTAGGGAT < 1:269537/143‑1 TCCCTGCAAATCCCAAATAACTTCGGGAATGATTGTTATCAATGACGATAATAAGACCAATAACGGTTTATCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATA > 1:778223/1‑122 TCCCTGCAAATCCCAAATAACTTCGGGAATGATTGTTATCAATGACGATAATAAGACCAATAACGGTTTATCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATA < 2:778223/122‑1 CCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGC < 2:635394/143‑1 AGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCAT < 1:113333/143‑1 TGGATGGGTCTGGCAGGGTAACAGTATTGTTATTACCTATACAGGGGATGAAGGGATGACCAGAGTCATCCCTGCAAATCCCAAATAACTTCGGGAATGATTGTTATCAATGACGATAATAAGACCAATAACGGTTTATCCCTACTTAAGTAGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2884640‑2884485‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccctacttaagtagggaTAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCAT > NC_000913/2884503‑2884637 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |