New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1159325 =	56 (1.190)	5 (0.110)	5/262	5.7	8.9%	intergenic (+23/+37)	ptsG/fhuE	fused glucose‑specific PTS enzymes: IIB component/IIC component/ferric‑rhodotorulic acid outer membrane transporter
	?	NC_000913	1159347 =	50 (1.140)					intergenic (+45/+15)	ptsG/fhuE	fused glucose‑specific PTS enzymes: IIB component/IIC component/ferric‑rhodotorulic acid outer membrane transporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGGCGTAGTGGTTGCTGGTTCTGGTGTTCAGGCGATTTTCGGTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGT‑AGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTC  >  NC_000913/1159206‑1159488                                                                                                                                              |                                                                                                                                               ggggGTAGTGGTTGCGGGTTCGGGTGTTGAGGCGATGTGCGGTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCtttt                                                                                                                                               <  1:241308/143‑1 (MQ=255) gggCGTAGTGGTTGCTGGTTCTGGTGTTCAGGAGATATTGACGACTATATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCtttt                                                                                                                                               <  2:802091/143‑1 (MQ=255)  ggCGTAGTGGTGGCTGGTTCTGGTGTTCAGGCGATTTTCGGTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCttttt                                                                                                                                              <  2:430016/143‑1 (MQ=255)  agCGTAGTGGTTGCTGTTGTTCGTGTTCACGCGTTTTTCGCTACTAAATCTGATAACCTGAAAACCGAGAGGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCttttt                                                                                                                                              <  2:40398/142‑1 (MQ=255)      tAGTGGTTGCTGGTTCTGGTGTTCAGGCGATTTTCGGTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACa                                                                                                                                          <  1:263958/143‑1 (MQ=255)                tGGTTCTGGTGTTCAGGCGATTTTCGGTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTc                                                                                                                                >  1:731553/1‑143 (MQ=255)                      tGGTGTTCAGGCGATTTTCGGTACTAAATCCGATAACCTGAAAACCGTGGTGGCTGACCACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAAtt                                                                                                                          <  1:603005/143‑1 (MQ=255)                      tGGGGTTTAGGCGATTTTCGGTACTAAAGCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAAtt                                                                                                                          <  1:83482/143‑1 (MQ=255)                        gtgtTCAGGCGATTTTCGGTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGa                                                                                                                        >  1:435688/1‑143 (MQ=255)                        gggtTCAGGCGCTTTTCGGTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGa                                                                                                                        <  2:640535/141‑1 (MQ=255)                               ggCGATTTTCGGTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTCTTTTACAGGTGTCATTCAGAATTGATACCTGc                                                                                                                 >  2:696568/1‑143 (MQ=255)                               cgCGATTGTCGGTGCTAGATCCGATAACCTGAACAGCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGc                                                                                                                 <  2:313938/142‑1 (MQ=255)                                gCGATTTTCGGTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATGCGTAAGACGTTGGGGAGACTAAGGCAGCCAAGTGGCTGCCTTTGTCACAGGTGCTATGGAGAATTGATACGTGcc                                                                                                                >  2:311639/1‑143 (MQ=255)                                 cGATGTTCGGTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCg                                                                                                               <  1:114182/143‑1 (MQ=255)                                     tttCGGTACTAAATCCGATAACCTGAACACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTaa                                                                                                           >  1:527382/1‑143 (MQ=255)                                     tttCGGTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTAACTTAACCAATGTGGTTATTCAGAATTGATAAGCGCCGGTaa                                                                                                           >  2:582198/1‑143 (MQ=255)                                         ggTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGAGTTATTCAGAATTGATACGTGCCGGTAATGCt                                                                                                       <  2:433349/143‑1 (MQ=255)                                           tACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTCATGCTGa                                                                                                     >  1:208012/1‑143 (MQ=255)                                           tACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGa                                                                                                     <  1:483543/143‑1 (MQ=255)                                           tACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGa                                                                                                     >  1:195608/1‑143 (MQ=255)                                            aCTAAATCCTATAACCTGACAACCGAGATGGATGAGTACATCCGTAACCACTAATTCGTAAGACGTTGGGGAGACTAAGGCAGTCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGaa                                                                                                    <  1:232966/143‑1 (MQ=255)                                              tAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAGAt                                                                                                  >  1:363243/1‑143 (MQ=255)                                                 atcatagaactgaaaaaCCGAGATGGATGAGTCCATCCGTAACTATTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTAc                                                                                               <  2:35627/130‑1 (MQ=255)                                                    cGATAACCTGAAAACCGAGATGGATGAGTAAATCCGTAACCACTAAGCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTAcgcg                                                                                            <  2:70083/143‑1 (MQ=255)                                                     gATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTAGGGGAGACTAAGGCAACCAGATGGCTGCCAGATTTAGAGGAGTTATTCAGAATTAATATGGTCCTGTAAAACCGAAATTACGCgg                                                                                           >  2:439805/1‑143 (MQ=255)                                                      atgaCCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGgt                                                                                          <  2:382578/140‑1 (MQ=255)                                                      atatcttGACAACCGAGATGGATCAGTACAGCAGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGgt                                                                                          <  2:104420/137‑1 (MQ=255)                                                          cccgAAAACCGAGATGGGTGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGCGACGAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATCCGTGCCGGTAATGCTGAAATTACGCGGTGTGc                                                                                      <  2:432367/140‑1 (MQ=255)                                                           cTGAAAACCGAGATGGATGGGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGcc                                                                                     <  2:120454/143‑1 (MQ=255)                                                           cTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGcc                                                                                     >  1:617414/1‑143 (MQ=255)                                                           cTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTAATCAGAATTGATACGTGCCGGTAATGGTGAAATTAAGCGGAGCGcc                                                                                     >  2:778868/1‑143 (MQ=255)                                                                aaCCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGGCGTGGGGGAGACTAAGGCAGCCAGATGGCTGGCTTTTTTACAGGTGTTATTCAGAATTGGTACGTGCCGGTAAGGCGGAAATTACGCGGTGTGCCGT‑AGa                                                                               >  1:404180/1‑143 (MQ=255)                                                                aaCCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACACGTGTGATTAAGAATTGATACGTGCCGGTAATGCTGACATTACGCGGTGTGCCggtga                                                                                >  1:470120/1‑139 (MQ=255)                                                                                   aTCCGTAACCACTTATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGT‑AGACGATAGAACCTTCCACGtt                                                            <  2:771017/143‑1 (MQ=255)                                                                                    tCCGTAACCACTAATCCGGAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGT‑AGACGATAGAACCTTCCACGTTg                                                           <  1:122455/143‑1 (MQ=255)                                                                                    gtggTAACCGCGAATGGGTAAGACGGTGGGGAGGCTGCGGCGGCCAGATGGCTGCCTTTTGTGCAGGTGTTATTCGGCATCGATCCGTGCGGGTAATGCTGAAATTACGCGGTGTGCCGT‑AGACGATAGAACCTTCCACGTTg                                                           <  2:291722/140‑1 (MQ=255)                                                                                      cGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGT‑AGACGATAGAACCTTCCACggtggt                                                         >  1:33891/1‑143 (MQ=255)                                                                                           ccACTAATCCGTAAGACGTTGGGGAGACGAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGT‑AGACGATAGAACCTTCCACGTTGGTATCGt                                                    <  1:543084/143‑1 (MQ=255)                                                                                            cACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGT‑AGACGATAGAACCTTCCACGTGGGTATCGTa                                                   >  2:38042/1‑143 (MQ=255)                                                                                             aCTAATCCGTAAGACGTTGGGGAGACTAAGTCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTTTGCCGT‑AGACGATAGAACCTTCCACGTTGGTATCGTAg                                                  <  1:327476/143‑1 (MQ=255)                                                                                             aCTAATCCGTAAGACGGTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGT‑AGACGATAGAACCTTCCACGTTGGTATCGTAg                                                  <  1:631834/143‑1 (MQ=255)                                                                                                    cGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTAAAGGTGCTATTCAGAATTAATACGTGCCGGTAATGCTGAAATTACCCGGTGTGCCGTAAGACG‑GAGAACCTTCCACATTAGTATcctggcgtatct                                           >  2:71672/1‑132 (MQ=255)                                                                                                       aaGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGT‑AGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGa                                        >  1:574699/1‑143 (MQ=255)                                                                                                          aCGTTGGGGAGACTCAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTCATGCTGAAATTACGCGGTGTGCCGT‑AGCCGATAGAACCTTCCACGTTGGTATCGTCGGTTTTGTCGAACa                                     >  1:369164/1‑143 (MQ=255)                                                                                                          aCGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGT‑AGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACa                                     <  2:731553/143‑1 (MQ=255)                                                                                                             ttGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGT‑AGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGt                                  >  1:800348/1‑143 (MQ=255)                                                                                                                gggAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGGGTTATTCAGATTTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGT‑AGACGATAGAACCTTCCACGTTGGTATCGGAGGTTTTGTCGAACAGGTTAt                               >  1:426037/1‑143 (MQ=255)                                                                                                                   agaCTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGT‑AGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGa                            <  1:40714/143‑1 (MQ=255)                                                                                                                          ggCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTCCCGT‑AGACGACAGAACCTTCCACGTTTGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTccc                     <  1:725553/143‑1 (MQ=255)                                                                                                                           gCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGT‑AGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTAGTGACGTTcccc                    >  1:613116/1‑143 (MQ=255)                                                                                                                                     ggCTGCCCTTTTTAGCGGTGTTATTCAGAATGGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGT‑AGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACgaga          <  2:120622/143‑1 (MQ=255)                                                                                                                                          ccTTTTTTACAGGTTTTATTCAGATTTGTTTCGTGTCGGTAATGCTGATATTACGGGGTGTGCCGT‑AGACGATAGAACCTTCCACGTTGGTATCGTATGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGttt     <  2:231070/143‑1 (MQ=255)                                                                                                                                             tttttACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGT‑AGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGGAGTTTTTc  >  2:341560/1‑143 (MQ=255)                                                                                                                                              |                                                                                                                                               GGGCGTAGTGGTTGCTGGTTCTGGTGTTCAGGCGATTTTCGGTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGT‑AGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTC  >  NC_000913/1159206‑1159488

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.