| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 3 (0.070) | 41 (0.950) | 36/282 | 0.2 | 93.2% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 3 (0.070) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
TGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGT > NC_000913/4001506‑4001784 | ggcattgATCTTGTCCAACCGGAGGACGACGAGGGACTGCGCGTACATTCTGAACTTGGGCGGAGCCT‑GCTAGCCGCGCGGGACTGGAAGACATCGAAGCATCGGCACGTTGCTTTGAAGACGACGACGGCCTGCATctcctt < 1:304567‑M1/140‑7 (MQ=255) tCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttc > 1:676110‑M1/1‑130 (MQ=255) tGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttt < 2:350912‑M1/143‑17 (MQ=255) aCCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcattcttcttctttgaagat > 2:4515‑M1/1‑121 (MQ=255) acgacgacgAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCAGCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcgga < 2:234619‑M1/143‑28 (MQ=255) cgacgacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaa > 1:137181‑M1/1‑115 (MQ=255) cgacgaGCGACTGCGCGTACCATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagat < 2:763497‑M1/143‑32 (MQ=255) cgacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgacgatgcggaagat > 2:490070‑M1/1‑112 (MQ=255) cgacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagat < 2:435541‑M1/143‑32 (MQ=255) gacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcgttcttcttctttgaagatgcggacgatc > 2:13868‑M1/1‑111 (MQ=255) acgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttctccttctttgaggatgcggaagatca > 1:239766‑M1/1‑110 (MQ=255) cGACTGCGCGTCCAATCTGCCCTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccg < 2:158531‑M1/143‑39 (MQ=255) aCTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgtaggtgcggaggatcccgccggt > 2:273076‑M1/1‑103 (MQ=255) atatgcacttggcCAGAGCCTCGCAACCCTCCCGGAACTGTAAGACATCGAAGCATCGGCACGTTCCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtg < 1:588189‑M1/137‑53 (MQ=255) aTCTGAAGCTGGCCAGGTCGTGTCATCGTGTCCTGAGCTGGAAGACATCGTAGCATCGGCAGTTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTGCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgtg < 1:120240/143‑1 (MQ=255) aCTTGGCCAGAGCTTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcattt < 2:342360‑M1/143‑59 (MQ=255) ttGGCCAGGGCAGGGCAACCCGCGCGGAACGGGAAGACAGCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttac < 2:27225‑M1/143‑61 (MQ=255) ttGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGACGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtacctccactgtggccattac > 1:144255‑M1/1‑83 (MQ=255) ggCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttacca < 1:426007‑M1/143‑63 (MQ=255) gagCCTGCCAACCCGCCCGGAAGCAGAAGATATGGATGCGTCGGCACTTTTCTTTGAAGACGACGACGGCATGCTTgtctttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttatcatccgt < 1:262238‑M1/143‑68 (MQ=255) cTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttattctgatttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatcgctgatg > 2:82302‑M1/1‑72 (MQ=255) ggCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggt > 2:735967‑M1/1‑70 (MQ=255) gCAACCCGCCCGGAACTGGAAGACATCGAAGCATCCCCACCTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtc < 2:25512‑M1/143‑75 (MQ=255) gacCCGCGCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgt < 1:167453‑M1/142‑77 (MQ=255) ccgcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggacgatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctg > 2:167325‑M1/1‑64 (MQ=255) gcccgGTACTGGAAGACATCGAAGCAGCGGCACGTTTGTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtt < 1:408762‑M1/143‑82 (MQ=255) gcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtt < 1:313337‑M1/143‑82 (MQ=255) ggAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttact < 2:569102‑M1/143‑86 (MQ=255) tttttcgtcacacaaGCATAGGCATGTTTCTTTTAATACGACGTTGGCCTG‑‑TAT‑‑‑CTCCTTCTTCTTCTTTGAAGGTTCGGATGTTCATGTCGTTAACTGCATTGTTGCATTTACCATCCGTTATGGTCGTCTGTTTACTCTgc < 1:152963/130‑1 (MQ=255) cGAAGCATGGGCACGTTTCTTTGAGGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaa < 1:626888‑M1/143‑101 (MQ=255) gAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttggaagatgcggaagatcacggcggtaactccactgtggcatttacgatccgtgatgggcgtgtgtttgctctgggtgggagggaac > 2:272617‑M1/1‑42 (MQ=255) gCATCGGCACGTTTCTGTGGAGACGACGACGGCCTGCATctccgtcttcttctttgaagatgcggaaggtcacgccggtagctccactgtggcagttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgc < 1:649612‑M1/143‑105 (MQ=255) aTCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgccc < 2:50170‑M1/143‑107 (MQ=255) aTCGGCACGTTTCTGTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgccc < 2:761869‑M1/143‑107 (MQ=255) tttCTTTGAAGACGACGACGGCCTGCATctccttctccttccttgaagatgcggaagatcccgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgt < 2:144255‑M1/143‑116 (MQ=255) tttCTGTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgt < 2:131652‑M1/143‑116 (MQ=255) tttGAAGACGACGACGGCCTGCATctccttcttcttctttgcagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggccggctctttactctgcgtgagcgtgaactgcccgcttttcgtctgt > 1:541804‑M1/1‑24 (MQ=255) tttGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggaaactccaccgtcgcatttatcatccgtgatggtcgtgtgtttactctgcggtagcgttatcttcgcgcttgtcgtccgt > 2:70180‑M1/1‑24 (MQ=255) gAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTCCCTAAACTTTATTATGCCCAACCCCTGATCTTCGTGTTTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATc < 2:557885/143‑1 (MQ=255) aaGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtga > 1:612496‑M1/1‑20 (MQ=255) aaGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtga < 2:612496‑M1/89‑70 (MQ=255) gccgacggcCTGCATcttcttcttcttctgtgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgc < 1:610519‑M1/141‑129 (MQ=255) acgacgGCCTGCATctccttcttcttccttgaagatgcggaagatcatgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcg > 1:682165‑M1/1‑14 (MQ=255) aTctcctccttcttcctcgacgacgcgcacggtctcgccggtatctccactgtggcagttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagcca < 1:299023‑M1/143‑142 (MQ=255) | TGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGT > NC_000913/4001506‑4001784 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |