| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 3 (0.070) | 41 (0.950) | 36/282 | 0.2 | 93.2% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 3 (0.070) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
GATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCA > NC_000913/4001512‑4001789 | ggcattgatcttgtccaaccggaggacgacgagggactgcgcgtacattctgaacttgggcggagcctgctagccgcgcgggactggaagacatcgaagcatcggcacgttgctttgaagacgacgacggcctgcatCTCctt < 1:304567‑M2/6‑1 (MQ=255) tcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttcttc > 1:676110‑M2/131‑143 (MQ=255) tgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCttt < 2:350912‑M2/16‑1 (MQ=255) accggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCATTCTTCTTCTTTGAAGAt > 2:4515‑M2/122‑143 (MQ=255) acgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcagcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGa < 2:234619‑M2/27‑1 (MQ=255) cgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGaa > 1:137181‑M2/116‑143 (MQ=255) cgacgagcgactgcgcgtaccatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGAt < 2:763497‑M2/31‑1 (MQ=255) cgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGACGATGCGGAAGAt > 2:490070‑M2/113‑143 (MQ=255) cgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGAt < 2:435541‑M2/31‑1 (MQ=255) gacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCGTTCTTCTTCTTTGAAGATGCGGACGATc > 2:13868‑M2/112‑143 (MQ=255) acgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTCCTTCTTTGAGGATGCGGAAGATCa > 1:239766‑M2/111‑143 (MQ=255) cgactgcgcgtccaatctgcccttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCg < 2:158531‑M2/38‑1 (MQ=255) actgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGTAGGTGCGGAGGATCCCGCCGGt > 2:273076‑M2/104‑143 (MQ=255) aTCTGAAGCTGGCCAGGTCGTGTCATCGTGTCCTGAGCTGGAAGACATCGTAGCATCGGCAGTTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTGCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgtg < 1:120240/143‑1 (MQ=255) atatgcacttggccagagcctcgcaaccctcccggaactgtaagacatcgaagcatcggcacgttcctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgtg < 1:588189‑M2/52‑1 (MQ=255) acttggccagagcttggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCAttt < 2:342360‑M2/58‑1 (MQ=255) ttggccagggcagggcaacccgcgcggaacgggaagacagcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTAc < 2:27225‑M2/60‑1 (MQ=255) ttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgacgacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTACCTCCACTGTGGCCATTAc > 1:144255‑M2/84‑143 (MQ=255) ggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCa < 1:426007‑M2/62‑1 (MQ=255) gagcctgccaacccgcccggaagcagaagatatggatgcgtcggcacttttctttgaagacgacgacggcatgcttGTCTTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTATCATCCGt < 1:262238‑M2/67‑1 (MQ=255) ctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTATTCTGATTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCGCTGATg > 2:82302‑M2/73‑143 (MQ=255) ggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGgt > 2:735967‑M2/71‑143 (MQ=255) gcaacccgcccggaactggaagacatcgaagcatccccacctttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGgtc < 2:25512‑M2/74‑1 (MQ=255) gacccgcgcggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGgtcgt < 1:167453‑M2/76‑1 (MQ=255) ccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGACGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTg > 2:167325‑M2/65‑143 (MQ=255) gcccggtactggaagacatcgaagcagcggcacgtttgtttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGtt < 1:408762‑M2/81‑1 (MQ=255) gcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGtt < 1:313337‑M2/81‑1 (MQ=255) tttttcgtcacacaaGCATAGGCATGTTTCTTTTAATACGACGTTGGCCTG‑‑TAT‑‑‑CTCCTTCTTCTTCTTTGAAGGTTCGGATGTTCATGTCGTTAACTGCATTGTTGCATTTACCATCCGTTATGGTCGTCTGTTTACTCTgc < 1:152963/130‑1 (MQ=255) ggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTAct < 2:569102‑M2/85‑1 (MQ=255) cgaagcatgggcacgtttctttgaggacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGaa < 1:626888‑M2/100‑1 (MQ=255) gaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTGGAAGATGCGGAAGATCACGGCGGTAACTCCACTGTGGCATTTACGATCCGTGATGGGCGTGTGTTTGCTCTGGGTGGGAGGGAAc > 2:272617‑M2/43‑143 (MQ=255) gcatcggcacgtttctgtggagacgacgacggcctgcatCTCCGTCTTCTTCTTTGAAGATGCGGAAGGTCACGCCGGTAGCTCCACTGTGGCAGTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGc < 1:649612‑M2/104‑1 (MQ=255) atcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGccc < 2:50170‑M2/106‑1 (MQ=255) atcggcacgtttctgtgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGccc < 2:761869‑M2/106‑1 (MQ=255) tttctttgaagacgacgacggcctgcatCTCCTTCTCCTTCCTTGAAGATGCGGAAGATCCCGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGt < 2:144255‑M2/115‑1 (MQ=255) tttctgtgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGt < 2:131652‑M2/115‑1 (MQ=255) gAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTCCCTAAACTTTATTATGCCCAACCCCTGATCTTCGTGTTTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATc < 2:557885/143‑1 (MQ=255) tttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGCAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGCCGGCTCTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGt > 1:541804‑M2/25‑143 (MQ=255) tttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGAAACTCCACCGTCGCATTTATCATCCGTGATGGTCGTGTGTTTACTCTGCGGTAGCGTTATCTTCGCGCTTGTCGTCCGt > 2:70180‑M2/25‑143 (MQ=255) aagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGa > 1:612496‑M2/21‑89 (MQ=255) aagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGa < 2:612496‑M2/69‑1 (MQ=255) gccgacggcctgcatCTTCTTCTTCTTCTGTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGc < 1:610519‑M2/128‑1 (MQ=255) acgacggcctgcatCTCCTTCTTCTTCCTTGAAGATGCGGAAGATCATGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCg > 1:682165‑M2/15‑143 (MQ=255) atCTCCTCCTTCTTCCTCGACGACGCGCACGGTCTCGCCGGTATCTCCACTGTGGCAGTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCa < 1:299023‑M2/141‑1 (MQ=255) | GATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCA > NC_000913/4001512‑4001789 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |