New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 4115652 | 42 (1.000) | 3 (0.080) | 3/266 | 6.1 | 7.0% | intergenic (‑74/+61) | glpX/glpK | fructose 1,6‑bisphosphatase II/glycerol kinase |
? | NC_000913 | = 4115656 | NA (NA) | intergenic (‑78/+57) | glpX/glpK | fructose 1,6‑bisphosphatase II/glycerol kinase | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
CCTAACCATTTGTAGCCAGCCAGCGCCGCTGATTCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4115505‑4115652 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcggggGCAACCCCGCACACATCAATAATCCCTCCCTTCCCCTGTGCTACACTTCGCGCCATTCCTTACTGCTTAGAGTTTGCTATGAGACGAGAACTTGCCATCGAATTTTCCCGCGTCACCGAATCAGCGGCGCTGGCTGGCTACA < NC_000913/4115656‑4115515 CCTAACCATTTGTATCCAGCCAGCGCCGCTGATTCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTG < 2:398909/143‑1 cAACCATTTGTAGCCAGCCAGCGCCGCTGATTCGGTGACGAGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCG < 2:710055/142‑1 AACCATTTGTAGCCAGCCAGCGCCGCTGATTCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGGGTAGCACAGGGGAAGGGAGGGATTCTTGATGTGTGCGG > 2:29505/1‑143 ACCATTTGTAGCCAGCCAGCGCCGCTGATTCGGTGACGCGGGAAACTTCGATGGCAAGTTCTCGTCTCATCGCAAACGCTAAGCAGTAAGGAATGGCGCGAAGTGTAGGACAGGGGAAGGGAGGGACTAGTGATGTGTGCGcg > 2:705472/1‑141 ACCATTGGGAGCCGGCCAGCGCCGCTGTTTCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCGAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATCGATGTGTGCGGG < 1:673413/143‑1 GCCAGCGCCGCTGATTCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGGCAACCCCGCACA < 1:174202/143‑1 TAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGGCAACCCCGCACACATCAATAATC > 1:31628/1‑89 TAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGGCAACCCCGCACACATCAATAATC < 2:31628/89‑1 CGGGGGCAACCCCGCACACCTCAATAATCCCTCGCGGCCGCTGTGCTACACTTCGCGCCATTCCTTACTGCTGAGAGTTTGCTATGAGACGAGGACTTGCCATCGAATTTTCCCGCGTCACCGAATCAGCGGCGCTGGCTGGC < 1:705973/143‑1 CGGGGGCAACCCCGCACACATCAATAATCCCTCCCTTCCCCTGTGCTACACTTCGCGTCATTCCTTACTGCTGAGAGTGTGTTATGAGACGAGAACTTGCCATCGAATTTTCCCGCGTCACCGAATCAGCGGCGCTGGCTGGC < 2:362650/143‑1 GGGGCAACCCCGCACACATCAATAATCCCTCCCTTCCCCTGTGCTACACTTCGCGCCATTCCTTACTGCTTAGAGTTTGCTATGAGACGAGAACTTGCCATCGAATTTTCCCGCGTCACCGAATCAGCGGCGCTGGCTGGCTA > 1:579046/1‑143 GGCAACCCCGCACACATCAATAACGCCGCCCTTCCGCTGTGCTACACTTCGCGCCATTCCTTGCTGGTTAGAGTTGGCTATGAGACGAGAACTTGCCAGCGAATTTTCCCGCGTCACCGAATCAGCGGCGCTGGCTGGCTACA < 2:616701/143‑1 CCTAACCATTTGTAGCCAGCCAGCGCCGCTGATTCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4115505‑4115652 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcggggGCAACCCCGCACACATCAATAATCCCTCCCTTCCCCTGTGCTACACTTCGCGCCATTCCTTACTGCTTAGAGTTTGCTATGAGACGAGAACTTGCCATCGAATTTTCCCGCGTCACCGAATCAGCGGCGCTGGCTGGCTACA < NC_000913/4115656‑4115515 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |