New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 4115652 | 42 (1.000) | 3 (0.080) | 3/266 | 6.1 | 7.0% | intergenic (‑74/+61) | glpX/glpK | fructose 1,6‑bisphosphatase II/glycerol kinase |
? | NC_000913 | = 4115656 | NA (NA) | intergenic (‑78/+57) | glpX/glpK | fructose 1,6‑bisphosphatase II/glycerol kinase | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
CATTTGTAGCCAGCCAGCGCCGCTGATTCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTCGGCATTTACATTATTCGTCGTGTTCTTCCCACGCCATCGCGCGTTTAACCGCTTTTTTCCAGCCTGCGTAACGGTAATTACGCTCAGTGGTT > NC_000913/4115511‑4115794 | cATTTGTAGCCAGCCAGCGCCGCTGATTCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCAAAGCGGAAGGGAGGGATTATTGATGTGTGCGGGGt > 1:513646/1‑143 (MQ=255) tGTAGCCAGCCAGCGCCGCTGATTCGGTGACGCGGGAAAATTCGCTGGCAAGTTCTCGTCTCATAGCCAACTCTAACCAGCAAGGAATGGCGCGAAGTGTAGCACAGCGGAAGGGCGGCGTTATTGATGTGTGCGGGGTTGcc > 2:616701/1‑143 (MQ=255) tAGCCAGCCAGCGCCGCTGATTCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGcccc < 1:579046/143‑1 (MQ=255) gccagccaGCGCCGCTGATTCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAACACACTCTCAGCAGTAAGGAATGACGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCg > 2:362650/1‑143 (MQ=255) gccagccaGCGCCGCTGATTCGGTGACGCGGGAAAATTCGATGGCAAGTCCTCGTCTCATAGCAAACTCTCAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGCGGCCGCGAGGGATTATTGAGGTGTGCGGGGTTGCCCCCg > 1:705973/1‑143 (MQ=255) ccagccagCGCCGCTGATTCGGTGACGCGGGAAAATTCGATGGCAAGTGCTCGTCGCATAGCAGCCTCTAAGCAGGAAGGAATGGCGCGAAGGGTGGCACAGGGGACGGGGGGCATTACCGACGGGTGCGGGGTCGCCCCCGc > 1:247200/1‑143 (MQ=255) gccagcGCCGCTGATTCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCgggggcaaccccgcaca < 1:174202/143‑14 (MQ=255) cgccgcTGATTCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCg < 1:553691/143‑1 (MQ=255) gcagcgggttCCGTGAAGAGCGAAAATTCGATGGCAAGTTTTCGTCTCGTCGCAGGCTCTAAGCAGTAAGGAATGGCGCGCAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCgg < 1:499870/135‑1 (MQ=255) ccggTGATTCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCggg < 1:129426/143‑1 (MQ=255) ccgacgactCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGACTCAGAGCAAACTCTAAGCGGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCggg < 1:183811/135‑1 (MQ=255) cTGATTCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACt > 2:684750/1‑143 (MQ=255) tGATTCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTACCCCCGCAAGTTTCGGGACTa > 1:41213/1‑143 (MQ=255) tCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCAGCACGTTTCGGGCCTACCgg > 1:646905/1‑143 (MQ=255) gACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTCGCACCAGATAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCg < 2:460033/143‑1 (MQ=255) gACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCg < 2:686574/143‑1 (MQ=255) gACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGCTGCACCCGCACGTTGCGGGACTACCGGATGCg > 1:631852/1‑143 (MQ=255) gcgGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCa > 1:569342/1‑143 (MQ=255) cgGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACAGGATGCGGcgt > 2:427414/1‑141 (MQ=255) ttCGGTGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCAGAAACGcgt > 2:205209/1‑141 (MQ=255) tggcccgtgctcGTATCAGAGCAAACTCGAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGCTGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTc < 2:301997/134‑1 (MQ=255) atacAATTTCTCGTCTCATAGCAACCTCTAATCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTc < 2:645931/140‑1 (MQ=255) cAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCCGATGCGGCATAAACGCTTCATTCGGc > 2:680519/1‑143 (MQ=255) aGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCAGCACGTTTCGGGACGACCGGATGCGCCGTAAACCCTTCATTCGGGAt > 1:30575/1‑143 (MQ=255) tcGTGTCAGAGCAAACGCGAAGCAGGAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATGATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTCGGCATTTACa < 2:326049/143‑1 (MQ=255) tAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGACGTGTGCGGGGTTGCCCCCGCACGTTTCGGGAGTACCGGATGCGGCGTAAACGCTTCACTCGGCATTTGCATGACtcgt > 1:192295/1‑143 (MQ=255) agcgaaggccaaGCGGTAAGGAAGGGCGCGAAGTGGAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTCGGCATTTACATTATtcgtc < 2:320816/133‑1 (MQ=255) aaaCTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGACGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATACACGCTTCCTTCGGCATCTACCCTATTCGTCgtg > 1:571747/1‑143 (MQ=255) cggaGCGGTAAGGAACGGCGGGAAGTGGAGCGCAGGGGCGTGTGGGTGTTATTGGTGTGTGCGGGGTCGCCCCCGCGCGTTTCTGGACTACCGGATGCGGCATATACGCTTCATTCGGCATTTACATTATTCGTCGTGttctt < 1:611188/140‑1 (MQ=255) aGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTCGGCATTTACATTATTCGTCGTGTTCTTCCCACGCCAt > 1:596220/1‑143 (MQ=255) gcgAAGTGTAGCACAGGGGCAGGGAGGGCTTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTCGGCACTTGCATTATTCGTCGTTTTCTTCCCACGCCATCGCGCGttt < 2:202800/143‑1 (MQ=255) gAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTCGGCATTTACATTATTCGTCGTGTTCTTCCCACGCCATCGCGCGTTTaa < 2:636061/143‑1 (MQ=255) tgtAGCACAGGGGAAGGGAGGGATTATTGAGGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTCGGCATTTACATTATTCGTCGTGTTCTTCCCACGCCATCGCGCGTTTAACCGc < 1:68359/143‑1 (MQ=255) acaGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCCTTCGGCATTTACATCATTCGTCGTGTTCTCCCCACGCCATCGCGCGGCTCACCGCtttttt > 1:554085/1‑143 (MQ=255) acaGGGGAAGGGAGGGATTATTGATGTGTGCGGGATCGCTTCCGCTCGTTTCGGGACTACCGGATGCGGGATGAACGCGGTAATCTTTATTTACTTTATTCGTCTGGTTCGTCCCACGCCATCGCGCGTTGAACCACtttttt > 1:185438/1‑143 (MQ=255) ggggGAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTCGGCATTTACATTATTCGTCGTGTTCTTCCCACTCCATCGCGCGTTTAACCGCTTTTTTCCa < 2:282925/143‑1 (MQ=255) ggggAAGGGAGGGATTATGGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTCGGCATTTACATTATTCGTCGTGTTCTTCCCACGCCATCGCGCGTTTAACCGCTTTTTTCCa < 2:546230/143‑1 (MQ=255) ggAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATACCCGCTTCATTCGGCATTTACATTATTCGTCGTGTTCTTCCCACGCCATCGCGCGTCTAACCGCTTTTTTCCAGc > 1:291196/1‑143 (MQ=255) tattGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTCGGCATTTACATTATTCGTCGTGTTCTTCCCACGCCATCGCGCGTTTAACCGCTTTTTTCCAGCCTGCGTAACGGTa > 1:664233/1‑143 (MQ=255) cttgttgTGTGCGGGGTTGTCGCGGCGTGTTTCCACACTCCAGGATGCCGGATGATCGCTTCATTCGGCATTTACATTATTCGTCGGGTTCTTCCCACGCCATCGCGCGTTTAACCGCTTTTTTCCAGCCTGCGTAACGGTaa < 1:549100/142‑1 (MQ=255) gATGGGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTCGGCATTTACATTATTCGTCGTGTTCTTCCCACGCCATCGCGCGTTTAACCGCTTTTTTCCAGCCTGCGTAACGGTAATTa < 2:37197/143‑1 (MQ=255) ggggTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTCGGCATTTACATTATTCGTCGTGTTCTTCCCACGCCATCGCGCGTTTAACCGCTTTTTTCCAGCCTGCGTAACGGTAATTACGCTCAGTg < 2:41213/143‑1 (MQ=255) gTTTCCCCCTCACGTTTCTGGACTCCCGGTCGCGGCATAAACGCTCCATTCGGCACTTACATTATTCGTCGTGTTCGTCCCACGCCCTCGCGCGTTTAACCGCATTTTTCCAGCCTGCGTAACGGTAATTACGCTCAGTGGtt < 2:681814/143‑1 (MQ=255) | CATTTGTAGCCAGCCAGCGCCGCTGATTCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTCGGCATTTACATTATTCGTCGTGTTCTTCCCACGCCATCGCGCGTTTAACCGCTTTTTTCCAGCCTGCGTAACGGTAATTACGCTCAGTGGTT > NC_000913/4115511‑4115794 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |