| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,646,088 | Δ14 bp | coding (192‑205/306 nt) | ydfV → | Qin prophage, uncharacterized protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1646088 | 1646101 | 14 | 63 [0] | [0] 63 | ydfV | Qin prophage, uncharacterized protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1646087 | 0 (0.000) | 63 (1.100) | 55/278 | 0.0 | 100% | coding (191/306 nt) | ydfV | Qin prophage, uncharacterized protein |
| ? | NC_000913 | 1646102 = | 0 (0.000) | coding (206/306 nt) | ydfV | Qin prophage, uncharacterized protein | |||||
GAAGTCAGAAAGTAGTCGTAAGAACGGTGATCACTGTCCGCTTTGTGCCAGGAGCAGCCATTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATACTTTGTGACGGTCAGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAGGAACGTAACACGTTTTATGCAAC > NC_000913/1645946‑1646227 | gAAGTCAGAAAGTAGTCGTAAGAACGGTGATCACTGTCCGCTTTGTGCCAGGAGCAGCCATTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAg < 2:978045‑M1/143‑2 (MQ=255) gTCAGATAGTAGTCGTAAGAACGGTGATCACTGTCCGCTTTGTGCCAGGAGCAGCCATTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggct < 1:623800‑M1/143‑5 (MQ=255) gTCAGAAAGTAGTCGTAAGAACGGTGATCACTGTCCGCTTTGTGCCAGGAGCAGCCATTGCTAAGTCCATCCTGTATTGTGCAGGTCGGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggct > 1:625358‑M1/1‑139 (MQ=255) tcggaaaGTAGGCGTACGAACGGTGATCACTGTCCGCGTTGTGCCAGGAGCAGCCATTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggcta < 1:432620‑M1/140‑6 (MQ=255) tCAGAAAGTAGTCGTAAGAACGGTGATCACTGTCCGCTTTGTGCCAGGAGCAGCCATTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggcta > 2:443492‑M1/1‑138 (MQ=255) gAAAGTAGTCGTAAGAACGGTGATCACTGTCCGCTTTGTGCCAGGAGCAGCCATTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacat < 2:820337‑M1/143‑9 (MQ=255) aaaGTAGTCGTAAGAACGGTGATCACTGTCCGCTTTGTGCCAGGAGCAGCCATTGCTAAGTACATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacata > 2:419201‑M1/1‑134 (MQ=255) tagtCGTAAGAACGGTGATCACTGTCCGCTTTGTGCCAGGAGCAGCCATTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgca < 2:572924‑M1/143‑14 (MQ=255) gAACGGTGATCACTGTCCGCTTTGTGCCAGGAGCAGCCATTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaac < 1:443492‑M1/143‑23 (MQ=255) gcgacccctgtccgcTCTGTGCCAGGAGCAGCCATTGCTAAGCCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttatt < 2:1037‑M1/136‑28 (MQ=255) gTGATCACTGTCCGCTTTGTGCCAGGAGCAGCCATTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttact > 1:75890‑M1/1‑116 (MQ=255) cACTGTCCGCTTTGTGCCAGGAGCAGCCATTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCCTCGAggctacatatgcacaactcaacttattcatct > 2:785926‑M1/1‑111 (MQ=255) tCCGCTTTGTGCGAGGAGCAGCCTTTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAACAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacctatgcacaactcaacttattcctctatttt < 1:820661‑M1/143‑38 (MQ=255) ccGCTTTGTGCCAGGAGCAGCCATTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttt > 2:876874‑M1/1‑105 (MQ=255) ccGCTTTGTGCCAGGAGCAGCCATTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttt < 2:769833‑M1/143‑39 (MQ=255) ttGTGCCAGGAGCAGCCATTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctt < 2:578310‑M1/143‑44 (MQ=255) gtgCCAGGAGCAGCCATTGCTAAGTCCATCCTGTATTGTGCGGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgcttta < 1:235029‑M1/143‑46 (MQ=255) gtgCCAGGAGCAGCCATTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgcttta < 2:722037‑M1/143‑46 (MQ=255) ccAGGAGCAGCCATTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcaccactcaacttattcatctattttttgctttagca > 2:931851‑M1/1‑95 (MQ=255) ccAGGAGCAGCCATTGATAAGTCCATCCTGTATTGTGGAGGTCGGCGCGTTGTTAAAGAGTGCGGCCATCGTCTTACTGGTACAGACACCATATAggctacatacgcccaactgaacttactcatctttcgtttgctttagca > 1:78878‑M1/1‑95 (MQ=255) cAGGAGCAGTCATTGCTATGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcat < 1:609617‑M1/143‑50 (MQ=255) cAGGAGCAGCCATTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcat < 2:753818‑M1/143‑50 (MQ=255) ggAGCAGCCATTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgt > 2:44590‑M1/1‑92 (MQ=255) gcCATTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGGTTTTAAAGCGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacgtaatcatctattattttctttaacatgtcagtga > 1:16967‑M1/1‑86 (MQ=255) ccATTGCTAAGTCCATCCTGTATGGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgtt < 1:614687‑M1/143‑59 (MQ=255) cATTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATTggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttg < 1:936020‑M1/143‑60 (MQ=255) aTTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGCTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttgc > 1:74645‑M1/1‑83 (MQ=255) ttGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttgct > 2:157257‑M1/1‑82 (MQ=255) tGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttgctt < 1:44590‑M1/143‑63 (MQ=255) gCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttgcttt < 2:621868‑M1/143‑64 (MQ=255) cTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttgctttc > 2:653284‑M1/1‑79 (MQ=255) tAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaactgatgcatctattttttgatttagcatgtacctattgcttcct > 1:56355‑M1/1‑78 (MQ=255) tCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgtttctttctcgtcgcag > 1:216275‑M1/1‑70 (MQ=255) tCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGACCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttcgcatgtcagtgttgctttctcgttggct > 1:302714‑M1/1‑70 (MQ=255) ccTGTATTGTGCAGGTCGGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttgctttctcgtcggcgg < 2:625358‑M1/143‑75 (MQ=255) tGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttgctttctcgtcggcgggt > 1:134742‑M1/1‑67 (MQ=255) tATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcctctatttcttgctttagcatgtcactgctgcttcctcgcctgcgggtgc > 2:287074‑M1/1‑65 (MQ=255) ttGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttgctttctcgtcggcgggtgagc < 1:745878‑M1/143‑81 (MQ=255) tgCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttgctttctcgtcggcgggtgagcggt > 2:142146‑M1/1‑60 (MQ=255) gCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAtgctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttgctttttcgtcggcgggtgagcggtg < 1:174112‑M1/143‑85 (MQ=255) gCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttcctttctcgtcggcgggtgagcgctg > 1:864298‑M1/1‑59 (MQ=255) cggtAAGATCCTTTTTAATGACTTCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttgctttctcgtcggcgggtgagcggtgac < 1:3367‑M1/142‑87 (MQ=255) aGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttgctttctcgtcggcgggtgagcggtgac < 1:876874‑M1/143‑87 (MQ=255) gTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttgctttctcgtcggcgggtgagcggtgacctggcctgcc > 2:916965‑M1/1‑47 (MQ=255) gTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttgctttctcgtcggcgggtgagcggggacctgacctgtc > 2:228598‑M1/1‑47 (MQ=255) ttttAAAGAGGCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttgctttctcgtcggcgggtgagcggtgacctgacctgtcga < 2:220519‑M1/143‑99 (MQ=255) tttAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttgctttctcgtcggcgggtgagcggtgacctgacctgtcgat > 1:170692‑M1/1‑44 (MQ=255) agagTCCGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttgctttctcgtcggcgggtgagcggtgacctgacctgtcgataaagg > 2:799553‑M1/1‑39 (MQ=255) agTGCGTCCACCAGCTTACTGGTACGTACCCCATATAggctacatatgcacacctcaccttatgcatctattttttgctttagcatgtcagtgttgctttctcgtcggcgggtgagcggtgacctgacctgtcgataaaggaa < 2:741622‑M1/143‑107 (MQ=255) gTCCGGCCATCATCTGATTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattgtctgctttagcatgtcagtgttgctttctcgtcggcgggtgagcggtgacctgacctgtcgataaaggaac < 1:881344‑M1/143‑108 (MQ=255) ccGGCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttgctttctcgtcggcgggtgagcggtgacctgacctgtcgataaaggaacgt < 2:21074‑M1/143‑110 (MQ=255) ggCCATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttgctttctcgtcggcgggtgagcggtgacctgacctgtcgataaaggaacgtaa < 2:799351‑M1/143‑112 (MQ=255) ggCCATCATCTTACTGGTACAGACACCATATAggctacatatgcaaaactcaacttattcatctattttttacttaagcatgtcagtgttgctttctattcagcgggtgagcggtgacctgacctttctatataggatcgtaa > 1:121630‑M1/1‑32 (MQ=255) ccATCATCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttgctttctcgtcggcgggtgagcggtgacctgacctgtcgataaaggaacgtaaca < 1:142146‑M1/143‑114 (MQ=255) catcatCTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttgctttctcgtcggcgcgtgagcggtgacatgagctcgtgagcaaggaccgtaacac > 1:395947‑M1/1‑29 (MQ=255) atcTTACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttgctttctcgtcggcgggtgagcggtgacctgacctgtcgataaaggaacgtaacacgttt < 2:310009‑M1/143‑119 (MQ=255) ttACTGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttgctttctcgtcggcgggtgagcggtgacctgacctgtcgataaaggaacgtaacacgttttat < 1:157257‑M1/143‑122 (MQ=255) tGGTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttgctttctcgtcggcgggtgagcggtgacctgacctgtcgatcaaggaacgtaacacgttttatgcaa > 1:40741‑M1/1‑18 (MQ=255) ttacgtgcaccatatagggtacatatcgagcgcgcaacttattcatctattttgtgcgttagcatgtcagtgttgctgtctcgtcggcgggtgagcggtgagctgacctgtcgataaaggaacgtaacacgttttatgcaaca < 1:999352‑M1/136‑128 (MQ=255) gTACAGCCACCGTATAggctacatatgcacaactccacttgttcatctattttttgctttagcatgtcagtgttgctttctcgtcggcgggtgagcggtgacctgccctgtcgataaaggaacgtaacacgttttatgcaaca < 1:277501‑M1/143‑128 (MQ=255) gTACAGACACCATATAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttgctttctcgtcggcgggtgagcggtgacctgacctgtcgataaaggaacgtaacacgttttatgcaacc > 1:789492‑M1/1‑16 (MQ=255) atatAggctacatatgcacaactcaacttattcatctattttttgctttagcatgtcagtgttgctttctcgtcggcgggtgagcggtgacctgacctgtcgataaaggaacgtaacacgttttatgcaacacccgcatgcgg > 2:452064‑M1/1‑5 (MQ=255) ataggctacatatgcacacctcaacttattcatctattttttgctttagcatgtcagtgttgctttctcgtcggcgggtgagcggtgacctgacctgtcgataaaggaacgtaacacgttttatgcaacacccgcatgcggca < 2:880147‑M1/143‑141 (MQ=255) | GAAGTCAGAAAGTAGTCGTAAGAACGGTGATCACTGTCCGCTTTGTGCCAGGAGCAGCCATTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATACTTTGTGACGGTCAGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAGGAACGTAACACGTTTTATGCAAC > NC_000913/1645946‑1646227 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |