| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,646,088 | Δ14 bp | coding (192‑205/306 nt) | ydfV → | Qin prophage, uncharacterized protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1646088 | 1646101 | 14 | 63 [0] | [0] 63 | ydfV | Qin prophage, uncharacterized protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1646087 | 0 (0.000) | 63 (1.100) | 55/278 | 0.0 | 100% | coding (191/306 nt) | ydfV | Qin prophage, uncharacterized protein |
| ? | NC_000913 | 1646102 = | 0 (0.000) | coding (206/306 nt) | ydfV | Qin prophage, uncharacterized protein | |||||
GTCGTAAGAACGGTGATCACTGTCCGCTTTGTGCCAGGAGCAGCCATTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATACTTTGTGACGGTCAGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAGGAACGTAACACGTTTTATGCAACACCCGCATGCGGCA > NC_000913/1645960‑1646241 | gaagtcagaaagtagtcgtaagaacggtgatcactgtccgctttgtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatatag < 2:978045‑M2/1‑1 (MQ=255) gtcagatagtagtcgtaagaacggtgatcactgtccgctttgtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCt < 1:623800‑M2/4‑1 (MQ=255) gtcagaaagtagtcgtaagaacggtgatcactgtccgctttgtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcggctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCt > 1:625358‑M2/140‑143 (MQ=255) tcggaaagtaggcgtacgaacggtgatcactgtccgcgttgtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTa < 1:432620‑M2/5‑1 (MQ=255) tcagaaagtagtcgtaagaacggtgatcactgtccgctttgtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTa > 2:443492‑M2/139‑143 (MQ=255) gaaagtagtcgtaagaacggtgatcactgtccgctttgtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACat < 2:820337‑M2/8‑1 (MQ=255) aaagtagtcgtaagaacggtgatcactgtccgctttgtgccaggagcagccattgctaagtacatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACata > 2:419201‑M2/135‑143 (MQ=255) tagtcgtaagaacggtgatcactgtccgctttgtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGca < 2:572924‑M2/13‑1 (MQ=255) gaacggtgatcactgtccgctttgtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCAcaactcaac < 1:443492‑M2/22‑1 (MQ=255) gtgatcactgtccgctttgtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACttact > 1:75890‑M2/117‑141 (MQ=255) gcgacccctgtccgctctgtgccaggagcagccattgctaagcccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTAtt < 2:1037‑M2/27‑1 (MQ=255) cactgtccgctttgtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccctcgaGGCTACATATGCACAACTCAACTTATTCATCt > 2:785926‑M2/112‑143 (MQ=255) tccgctttgtgcgaggagcagcctttgctaagtccatcctgtattgtgcaggtcagctcgtttttaaacagtccggccatcatcttactggtacagacaccatataGGCTACCTATGCACAACTCAACTTATTCCTCTAtttt < 1:820661‑M2/37‑1 (MQ=255) ccgctttgtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTAttttt > 2:876874‑M2/106‑143 (MQ=255) ccgctttgtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTAttttt < 2:769833‑M2/38‑1 (MQ=255) ttgtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCtt < 2:578310‑M2/43‑1 (MQ=255) gtgccaggagcagccattgctaagtccatcctgtattgtgcgggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTa < 1:235029‑M2/45‑1 (MQ=255) gtgccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTa < 2:722037‑M2/45‑1 (MQ=255) ccaggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACCACTCAACTTATTCATCTATTTTTTGCTTTAGCa > 2:931851‑M2/96‑143 (MQ=255) ccaggagcagccattgataagtccatcctgtattgtggaggtcggcgcgttgttaaagagtgcggccatcgtcttactggtacagacaccatataGGCTACATACGCCCAACTGAACTTACTCATCTTTCGTTTGCTTTAGCa > 1:78878‑M2/96‑143 (MQ=255) caggagcagtcattgctatgtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCAt < 1:609617‑M2/49‑1 (MQ=255) caggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCAt < 2:753818‑M2/49‑1 (MQ=255) ggagcagccattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGt > 2:44590‑M2/93‑143 (MQ=255) gccattgctaagtccatcctgtattgtgcaggtcagctcggttttaaagcgtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACGTAATCATCTATTATTTTCTTTAACATGTCagtga > 1:16967‑M2/87‑142 (MQ=255) ccattgctaagtccatcctgtatggtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGtt < 1:614687‑M2/58‑1 (MQ=255) cattgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatattGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTg < 1:936020‑M2/59‑1 (MQ=255) attgctaagtccatcctgtattgtgcaggtcagctcgcttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGc > 1:74645‑M2/84‑143 (MQ=255) ttgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCt > 2:157257‑M2/83‑143 (MQ=255) tgctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCtt < 1:44590‑M2/62‑1 (MQ=255) gctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCttt < 2:621868‑M2/63‑1 (MQ=255) ctaagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTtc > 2:653284‑M2/80‑143 (MQ=255) taagtccatcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTGATGCATCTATTTtttgatttagcatgtacctattgcttcct > 1:56355‑M2/79‑129 (MQ=255) tcctgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTTCTttctcgtcgcag > 1:216275‑M2/71‑140 (MQ=255) tcctgtattgtgcaggtcagctcgtttttaaagagtccgaccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTCGCATGTCAGTGTTGCTTTCTCGttggct > 1:302714‑M2/71‑142 (MQ=255) cctgtattgtgcaggtcggctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTcggcgg < 2:625358‑M2/74‑1 (MQ=255) tgtattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGt > 1:134742‑M2/68‑143 (MQ=255) tattgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCCTCTATTTCTTGCTTTAGCATGTCACTGCTGCTTCCTCGCCTGCGGGtgc > 2:287074‑M2/66‑142 (MQ=255) ttgtgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGc < 1:745878‑M2/80‑1 (MQ=255) tgcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGt > 2:142146‑M2/61‑143 (MQ=255) gcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataTGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTTTCGTCGGCGGGTGAGCGGtg < 1:174112‑M2/84‑1 (MQ=255) gcaggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTCCTTTCTCGTCGGCGGGTGAGCGCtg > 1:864298‑M2/60‑143 (MQ=255) cggtaagatcctttttaatgacttcggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGtgac < 1:3367‑M2/86‑1 (MQ=255) aggtcagctcgtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGtgac < 1:876874‑M2/86‑1 (MQ=255) gtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGtgacctggcctgcc > 2:916965‑M2/48‑141 (MQ=255) gtttttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGGGACCTGACCTGTc > 2:228598‑M2/48‑143 (MQ=255) ttttaaagaggccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGa < 2:220519‑M2/98‑1 (MQ=255) tttaaagagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGAt > 1:170692‑M2/45‑143 (MQ=255) agagtccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAgg > 2:799553‑M2/40‑143 (MQ=255) agtgcgtccaccagcttactggtacgtaccccatataGGCTACATATGCACACCTCACCTTATGCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAGGaa < 2:741622‑M2/106‑1 (MQ=255) gtccggccatcatctgattggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTGTCTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAGGAAc < 1:881344‑M2/107‑1 (MQ=255) ccggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAGGAACGt < 2:21074‑M2/109‑1 (MQ=255) ggccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAGGAACGTaa < 2:799351‑M2/111‑1 (MQ=255) ggccatcatcttactggtacagacaccatataGGCTACATATGCAAAACTCAACTTATTCATCTATTTTTTACTTAAGCATGTCAGTGTTGCTTTCTATTCAGCGGGTGAGCGGTGACCTGACCTTTCTATATAGGATCGTaa > 1:121630‑M2/33‑143 (MQ=255) ccatcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAGGAACGTAaca < 1:142146‑M2/113‑1 (MQ=255) catcatcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGCGTGAGCGGTGACATGAGCTCGTGAGCAAGGACCGTAacac > 1:395947‑M2/30‑143 (MQ=255) atcttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAGGAACGTAACACGttt < 2:310009‑M2/118‑1 (MQ=255) ttactggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAGGAACGTAACACGTTTTAt < 1:157257‑M2/121‑1 (MQ=255) tggtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATCAAGGAACGTAACACGTTTTATGCaa > 1:40741‑M2/19‑143 (MQ=255) ttacgtgcaccatataGGGTACATATCGAGCGCGCAACTTATTCATCTATTTTGTGCGTTAGCATGTCAGTGTTGCTGTCTCGTCGGCGGGTGAGCGGTGAGCTGACCTGTCGATAAAGGAACGTAACACGTTTTATGCAaca < 1:999352‑M2/127‑1 (MQ=255) gtacagccaccgtataGGCTACATATGCACAACTCCACTTGTTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGCCCTGTCGATAAAGGAACGTAACACGTTTTATGCAaca < 1:277501‑M2/127‑1 (MQ=255) gtacagacaccatataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAGGAACGTAACACGTTTTATGCaacc > 1:789492‑M2/17‑142 (MQ=255) atataGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAGGAACGTAACACGTTTTATGCAACACCCGCATGCgg > 2:452064‑M2/6‑143 (MQ=255) ataGGCTACATATGCACACCTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAGGAACGTAACACGTTTTATGCAACACCCGCATGCGGCa < 2:880147‑M2/140‑1 (MQ=255) | GTCGTAAGAACGGTGATCACTGTCCGCTTTGTGCCAGGAGCAGCCATTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATACTTTGTGACGGTCAGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAAAGGAACGTAACACGTTTTATGCAACACCCGCATGCGGCA > NC_000913/1645960‑1646241 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |