New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1251175 =	42 (0.830)	4 (0.080)	4/472	NT	8.0%	coding (110/1920 nt)	dhaR	dhaKLM operon transcription activator
	?	NC_000913	1251499 =	51 (1.050)					coding (434/1920 nt)	dhaR	dhaKLM operon transcription activator

GACCACTGACTGCCGATGAATCCATTGTGCATCAGGCAAGGGAAAAGAAAATTAGCCCAAATTATGTTTCATAGTGAAACATATGCTTTAATGAATGTTCCATATTGAAACTTTTACGTGTATTAATACTTAAAATTGCGAGCCGGAACACCTTTTGTCATAAGGGATGCGGGATATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCTCGATGAAACCGCCTGCATTCTCAGCCGTAATGGCGATCCGCAAACCTTGCAGCAGCTAAGTGCACTGGGATTCAATGACGGCACGTATTGCGCCGAGGGAATTATTGGTACTTGTGCGCTATCGTTAGCGGCTATCTCTGGTCAGGCCGTGAAAACGAT  >  NC_000913/1250891‑1251457                                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                           gtcaaggcgcaagacccgcgccgcctgggcattaataaattgcaaattaccctgctcgtcccagctaatcacgccatcatccatactttctaacagggcattaagttgatttaaatgacggttagtttcagcgagcaaactgtccgtcagcagtaaatttccgacctcgcgggcgattgccaacgtcaacggcaaatcagctgcggtagtttgctcaaccggacacgccagcgctattgttcccgtcaatcggcccttgctgtcaaacaacggcgttgcacaaaAGGcc                                                                                                                                                                                                                                                                                        >  2:55423‑M1/285‑289 (MQ=255) gtcaaggcgcaagacccgcgccgcctgggcattaataaattgcaaattaccctgctcgtcccagctaatcacgccatcatccatactttctaacagggcattaagttgatttaaatgacggttagtttcagcgagcaaactgtccgtcagcagtaaatttccgacctcgcgggcgattgccaacgtcaacggcaaatcagctgcggtagtttgctcaaccggacacgccagcgctattgttcccgtcaatcggcccttgctgtcaaacaacggcgttgcacaaaAGGcc                                                                                                                                                                                                                                                                                        >  2:340254‑M1/285‑289 (MQ=255) cgggcaggctgcgctggaagatgccttggcattaataaattgcaaattaccctgctcgtcccagctaatcacgccatcatccatactttctaacagggcattaagttgatttaaatgacggttagtttcagcgagcaaactgtccgtcagcagtaaatgtccgacctcgcgggcgattgccaacgtcaacggcaaatcagcggcggtagtgtgctcaaccggacacgccagcgcgagtgttcccgtcaatcggcccttgctgtcaaacaacggcgttgcacaaaAGGcc                                                                                                                                                                                                                                                                                        >  2:62363‑M1/285‑289 (MQ=255)                  gAATCCATTGTGCATCAGGCAAGGGAAAAGAAAATTAGCCCAAATTATGTTTCATAGTGAAACATATGCTTTAATGAATGTTCCATATTGAAACTTTTACGTGTATTAATACTTAAAATTGCGAGCCGGAACACCTTTTGTCATAAGGGATGCGGGATATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGc                                                                                                                                                                                                                                                                       <  2:285245/289‑1 (MQ=255)                                  aataaattgcaaattaccctgctcgtcccagctaatcacgccatcatccatactttctaacagggcattaagttgatttaaatgacggttagtttcagcgagcaaactgtccgtcagcagtaaatttccgacctcgcgggcgattgccaacgtcaacggcaaatcagctgcggtagtttgctcaaccggacacgccagcgctattgttcccgtcaatcggcccttgctgtcaaacaacggcgttgcacacaAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGt                                                                                                                                                                                                                                                       <  2:234270‑M1/38‑1 (MQ=255)                                       attgcaaattaccctgctcgtcccagctaatcacgccatcatccatactttctaacagggcattaagttgatttaaatgacggttagtttcagcgagcaaactgtccgtcagcagtaaatttccgacctcgcgggcgattgccaacgtcaacggcaaatcagctgcggtagtttgctcaaccggacacgccagcgctattgttcccgtcaatcggcccttgctgtcaaacaacggcgttgcacaaaAGGcc                                                                                                                                                                                                                                                                                        >  1:343268‑M1/247‑251 (MQ=255)                                       attgcaaattaccctgctcgtcccagctaatcacgccatcatccatactttctaacagggcattaagttgatttaaatgacggttagtttcagcgagcaaactgtccgtcagcagtaaatttccgacctcgcgggcgattgccaacgtcaacggcaaatcagctgcggtagtttgctcaaccggacacgccagcgctattgttcccgtcaatcggcccttgctgtcaaacaacggcgttgcacaaaAGGcc                                                                                                                                                                                                                                                                                        <  2:343268‑M1/5‑1 (MQ=255)                                                                ttGTTACATAGTGGAACAGATGCTTTAATGAATGTTCCATATTGGACCTGTTACCGGTATTAATCCTGAAAATGGCGGGCCGGAAAACCTTGTGTCATAAGGGTTGGGGGATATGAGTGGCGCTTTTAACAGCGAAGGTCGGAGCATATCTCCCTTAATTGCAACCTCCTGGGAACGATGCAATAAGCTGATGAAACGGGGGACATGGAACGTACAACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCt                                                                                                                                                                                                                         <  1:8090/288‑1 (MQ=255)                                                                      cacgccatcatccatactttctaacagggcattaagttgatttaaatgacggttagtttcagcgagcaaactgtccgtcagcagtaaatttccgacctcgcgggcgattgccaacgtcaacggcaaatcagctgcggtagtttgctcaaccggacacgccagcgctattgttcccgtcaatcggcccttgctgtcaaacaacggcgttgcacaaaAGGcc                                                                                                                                                                                                                                                                                        <  2:311890‑M1/5‑1 (MQ=255)                                                                      cacgccatcatccatactttctaacagggcattaagttgatttaaatgacggttagtttcagcgagcaaactgtccgtcagcagtaaatttccgacctcgcgggcgattgccaacgtcaacggcaaatcagctgcggtagtttgctcaaccggacacgccagcgctattgttcccgtcaatcggcccttgctgtcaaacaacggcgttgcacaaaAGGcc                                                                                                                                                                                                                                                                                        >  1:311890‑M1/216‑220 (MQ=255)                                                                         aGTGAAACATATGCTTTAATGAATGTTCCATATTGAAACTTTTACGTGTATTAATACTTAAAATTGCGAGCCGGAACACCTTTTGTCATAAGGGATGCGGGATATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGaa                                                                                                                                                                                                                >  1:216252/1‑289 (MQ=255)                                                                                  tatGCTTTAATGAATGTTCCATATTGAAACTTTTACGTGTATTAATACTTAAAATTGCGAGCCGGAACACCTTTTGTCATAAGGGATGCGGGATATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTgg                                                                                                                                                                                                       <  2:216252/289‑1 (MQ=255)                                                                                           atgaatgTTCCATATTGAAACTTTTACGTGTATTAATACTTAAAATTGCGAGCCGGAACACCTTTTGTCATAAGGGATGCGGGATATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATg                                                                                                                                                                                              >  2:319211/1‑289 (MQ=255)                                                                                                tgTTCCATATTGAAACTTTTACGTGTATTAATACTTAAAATTGCGAGCCGGAACACCTTTTGTCATAAGGGATGCGGGATATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAgg                                                                                                                                                                                                                           <  2:335417/255‑1 (MQ=255)                                                                                                tgTTCCATATTGAAACTTTTACGTGTATTAATACTTAAAATTGCGAGCCGGAACACCTTTTGTCATAAGGGATGCGGGATATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAgg                                                                                                                                                                                                                           >  1:335417/1‑255 (MQ=255)                                                                                                   tCCATATTGAAACTTTTACGTGTATTAATACTTAAAATTGCGAGCCGGAACACCTTTTGTCATAAGGGATGCGGGATATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAgg                                                                                                                                                                                                                           >  2:48751/1‑252 (MQ=255)                                                                                                   tCCATATTGAAACTTTTACGTGTATTAATACTTAAAATTGCGAGCCGGAACACCTTTTGTCATAAGGGATGCGGGATATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAgg                                                                                                                                                                                                                           <  1:48751/252‑1 (MQ=255)                                                                                                        atTGAAACTTTTACGTGTATTAATACTTAAAATTGCGAGCCGGAACACCTTTTGTCATAAGGGATGCGGGATATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCt                                                                                                                                                                                                                                         >  1:207853/1‑233 (MQ=255)                                                                                                        atTGAAACTTTTACGTGTATTAATACTTAAAATTGCGAGCCGGAACACCTTTTGTCATAAGGGATGCGGGATATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCt                                                                                                                                                                                                                                         <  2:207853/233‑1 (MQ=255)                                                                                                           tgatttaaatgacggttagtttcagcgagcaaactgtccgtcagcagtaaatttccgacctcgcgggcgattgccaacgtcaacggcaaatcagctgcggtagtttgctcaaccggacacgccagcgctattgttcccgtcaatcggcccttgctgtcaaacaacggcgttgcacaaaAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGcgtg                                                                                                                                                                              <  2:210012‑M1/111‑1 (MQ=255)                                                                                                            aaaCTTTTACGTGTATTAATACTTAAAATTGCGAGCCGGAACACCTTTTGTCATAAGGGATGCGGGATATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCCGGCCGCGCTGGAAGCTGCCTGGGAATATATGGCACCGCGAGCGTGTgc                                                                                                                                                                             >  1:341574/1‑289 (MQ=255)                                                                                                             aaCTTTTACGTGTATTAATACTTAAAATTGCGAGCCGGAACACCTTTTGTCATAAGGGATGCGGGATATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTgcg                                                                                                                                                                            <  1:310930/289‑1 (MQ=255)                                                                                                                 tttACGTGTATTAATACTTAAAATTGCGAGCCGGAACACCTTTTGTCATAAGGGATGCGGGATATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGt                                                                                                                                                                        >  1:86973/1‑289 (MQ=255)                                                                                                                        gtATTAATACTTAAAATTGCGAGCCGGAACACCTTTTGTCATAAGGGATGCGGGATATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCt                                                                                                                                                                 <  2:86973/289‑1 (MQ=255)                                                                                                                                   tAAAATTGCGAGCCGGAACACCTTTTGTCATAAGGGATGCGGGATATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGTGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTAt                                                                                                                                                                                                                                                             >  2:329156/1‑186 (MQ=255)                                                                                                                                   tAAAATTGCGAGCCGGAACACCTTTTGTCATAAGGGATGCGGGATATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGTGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTAt                                                                                                                                                                                                                                                             <  1:329156/186‑1 (MQ=255)                                                                                                                                   tAAAATTGCGAGCCGGAACACCTTTTGTCATAAGGGATGCGGGATATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCTCGATGAAAcc                                                                                                                                                       >  2:280393/1‑288 (MQ=255)                                                                                                                                    aaaaTTGCGAGCCGGAACACCTTTTGTCATAAGGGATGCGGGATATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATgg                                                                                                                                                                                             <  1:54869/249‑1 (MQ=255)                                                                                                                                    aaaaTTGCGAGCCGGAACACCTTTTGTCATAAGGGATGCGGGATATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATgg                                                                                                                                                                                             >  2:54869/1‑249 (MQ=255)                                                                                                                                    aaaaTTGCGAGCCGGAACACCTTTTGTCATAAGGGATGCGGGATATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCTCGATGAAACCg                                                                                                                                                      >  1:375935/1‑288 (MQ=255)                                                                                                                                                            tGTCATAAGGGATGCGGGATATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCATTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGCAGACATGGGACGTACCACATAAGGCCCAGGGCGTGACATTTGCATCTATTTATCGGCGTAAGACAGCGATGCTGACGCCCGGGCAGGCTGCGCTGGCGGCTGCCTGGGAATAGATGGCACCGCGAGAGGGTGAGCATGTTATCCTCGATGGAACCGCATGCACTCCGCGCCGTAACgggaa                                                                                                                             >  1:36796/1‑286 (MQ=255)                                                                                                                                                                 ccgacctcgcgggcgattgccaacgtcaacggcaaatcagctgcggtagtttgctcaaccggacacgccagcgctattgttcccgtcaatcggcccttgctgtcaaacaacggcgttgcacaaaAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCTCGATGAAACCGCCTGCATTCTCAGCCGTAATGGCGATCCg                                                                                                                         <  2:332966‑M1/164‑1 (MQ=255)                                                                                                                                                                        tGCGGGATATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACAtt                                                                                                                                                                                                                                                                          >  1:162313/1‑136 (MQ=255)                                                                                                                                                                        tGCGGGATATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACAtt                                                                                                                                                                                                                                                                          <  2:162313/136‑1 (MQ=255)                                                                                                                                                                        tGCGGGATATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCTCGATGAAACCGCCTGCATTCTCAGCCGTAATGGCGATCCGCAAACCtt                                                                                                                 >  2:187666/1‑289 (MQ=255)                                                                                                                                                                         ccgggcgatggccaccgtcaacggcaaatcagctacggtagtttgctcaaccggacacgccagcgctattgttcccgtcaatcggcccttgctgtcaaacaacggcgttgcacaaaAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCTCGATGAAACCGCCTGCATTCTCAGCCGTAATGGCGATCCGCAAACCTTg                                                                                                                >  1:332966‑M1/117‑289 (MQ=255)                                                                                                                                                                               tatGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCTCGATGAAACCGCCTGCATTCTCAGCCGTAATGGCGATCGGCAAACATTacagca                                                                                                           >  1:155510/1‑288 (MQ=255)                                                                                                                                                                                       gcgcTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCTCGATGAAACCGCCt                                                                                                                                                   >  1:330405/1‑240 (MQ=255)                                                                                                                                                                                       gcgcTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCTCGATGAAACCGCCt                                                                                                                                                   <  2:330405/240‑1 (MQ=255)                                                                                                                                                                                       gcgcTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCTCGATGAAACCGCCTGCATTCTCAGCCGTAATGGCGATCCGCAAACCTTGCAGCAGCTAAGTGc                                                                                                  >  2:263592/1‑289 (MQ=255)                                                                                                                                                                                       gcgcTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCAACGCGAGAGTCTGCGCTGTTTATCCTCGATGAAACCGCCTGACTTCCCAGCCGTAATGGCGATCCGCAACCCCTGCAGCAGCTAAGTg                                                                                                   >  1:223776/1‑288 (MQ=255)                                                                                                                                                                                                         ctgcggtagtttgctcaaccggacacgccagcgctattgttcccgtcaatcggcccttgctgtcaaacaacggcgttgcacaaaAgg                                                                                                                                                                                                                                                                                          >  2:413319‑M1/85‑87 (MQ=255)                                                                                                                                                                                                         ctgcggtagtttgctcaaccggacacgccagcgctattgttcccgtcaatcggcccttgctgtcaaacaacggcgttgcacaaaAgg                                                                                                                                                                                                                                                                                          <  1:413319‑M1/3‑1 (MQ=255)                                                                                                                                                                                                                   atCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCTCGATGAACCCGCCTGCATTCTCAGCCGTAATGGCGATCCGCAACCCTTGCAGCAGCTAAGTGCACTGGGCATCAATGACGGCACGTAttcc                                                                      >  1:269539/1‑287 (MQ=255)                                                                                                                                                                                                                        ccTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCTCGATGAAACCGCCTGCATTCTCAGCCGTAATGGCGATCCGCAAACCTTGCAGCAGCTAAGTGCACTGGGATTCAATGACGGCACGTATTGCGCCGa                                                                 >  1:364156/1‑289 (MQ=255)                                                                                                                                                                                                                        ccTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCTCGATGAAACCGCCTGCATTCTCAGCCGTAATGGCGATCCGCAAACCTTGCAGCAGCTAAGTGCACTGGGATTCAATGACGGCACGTATTGCGCCGa                                                                 <  2:375935/289‑1 (MQ=255)                                                                                                                                                                                                                                gCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCTCGATGAAACCGCCTGCATTCTCAGCCGTAATGGCGATCCGCAAACCTTGCAGCAGCTAAGTGCACTGGGATTCAATGACGGCACGTATTGCGCCGAGGGAatta                                                         <  1:263592/289‑1 (MQ=255)                                                                                                                                                                                                                                  aaCCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCTCGATGAAACCGCCTGCATTCTCAGCCGTAATGGCGATCCGCAAACCTTGCAGCAGCTAAGTGCACTGGGATTCAATGACGGCACGTATTGCGCCGa                                                                 >  2:415472/1‑279 (MQ=255)                                                                                                                                                                                                                                  aaCCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCTCGATGAAACCGCCTGCATTCTCAGCCGTAATGGCGATCCGCAAACCTTGCAGCAGCTAAGTGCACTGGGATTCAATGACGGCACGTATTGCGCCGa                                                                 <  1:415472/279‑1 (MQ=255)                                                                                                                                                                                                                                  aaCCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCTCGATGAAACCGCCTGCATTCTCAGCCGTAATGGCGATCCGCAAACCTTGCAGCAGCTAAGTGCACTGGGATTCAATGACGGCACGTATTGCGCCGAGGGAattatt                                                       >  1:402904/1‑289 (MQ=255)                                                                                                                                                                                                                                        ctGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCTCGATGAAACCGCCTGCATTCTCAGCCGTAATGGCGATCCGCAAACCTTGCACCAGCTCAGTGCAATGGGATTCAATGAAGGCAAGTATTGCGCCGAGGGAATTATTGGTaat                                                 >  1:204163/1‑287 (MQ=255)                                                                                                                                                                                                                                                            tgatgaAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCTCGATGAAACCGCCTGCATTCTCAGCCGTAATGGCGATCCGCAAACCTTGCAGCAGCTAAGTGCACTGGGATTCAATGACGGCACGTATTGCGCCGAGGGAATTATTGGTACTTGTGCGCTATCGTTAGCgg                              <  2:275169/288‑1 (MQ=255)                                                                                                                                                                                                                                                             gatgaAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCTCGATGAAACCGCCTGCATTCTCAGCCGTAATGGCGATCCGCAAACCTTGCAGCAGCTAAGTGCACTGGGATTCAATGACGGCACGTATTGCGCCGAGGGAATTATTGGTACTTGTGCGCTATCGTTAGCGGc                             <  1:187666/288‑1 (MQ=255)                                                                                                                                                                                                                                                                                       cacaTCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCTCGATGAAACCGCCTGCATTCTCAGCCGTAATGGCGATCCGCAAACCTTGCAGCAGCTAAGTGCACTGGGATTCAATGACGGCACGTATTGCGCCGAGGAAATTATTGGTACTTGTGCGCTATCGTTAGCGGCTATCTCTGGTCAGGCCGTGAAAACGAt  <  2:155510/289‑1 (MQ=255)                                                                                                                                                                                                                                                                                       cacaGCAGGCCCAGGTCGTGACATTTGATTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGGGCGCTGTTTATCCTCGATGAAACCGCCTGCATTCTCAGCCGTAATGGCGATCCGCAAACCTTGCAGCAGCTAAGTGCACTGGGATTCAATGACGGCACGTATTGCGCCGAGGGAATTATTGGTACTTGTGCGCTATCGTTAGCGGCTATCTCTGGTCAGGCCGTGAAAACGAt  <  1:280393/289‑1 (MQ=255)                                                                                                                                                                                                                                                                                            cAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCTCGATGAAACCGCCTGCATTCTCAGCCGTAATGGCGATCCGCAAACCTTGCAGCAGCTAAGTGCACTGGGATTCAATGACGGCACGTATTGCGCCGAGGGAATTATTGGTACTTGTTCGCTATCGTTAGCGGCTAtct                        >  1:389232/1‑262 (MQ=255)                                                                                                                                                                                                                                                                                            cAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCTCGATGAAACCGCCTGCATTCTCAGCCGTAATGGCGATCCGCAAACCTTGCAGCAGCTAAGTGCACTGGGATTCAATGACGGCACGTATTGCGCCGAGGGAATTATTGGTACTTGTGCGCTATCGTTAGCGGCTAtct                        <  2:389232/262‑1 (MQ=255)                                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                           GACCACTGACTGCCGATGAATCCATTGTGCATCAGGCAAGGGAAAAGAAAATTAGCCCAAATTATGTTTCATAGTGAAACATATGCTTTAATGAATGTTCCATATTGAAACTTTTACGTGTATTAATACTTAAAATTGCGAGCCGGAACACCTTTTGTCATAAGGGATGCGGGATATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCTCGATGAAACCGCCTGCATTCTCAGCCGTAATGGCGATCCGCAAACCTTGCAGCAGCTAAGTGCACTGGGATTCAATGACGGCACGTATTGCGCCGAGGGAATTATTGGTACTTGTGCGCTATCGTTAGCGGCTATCTCTGGTCAGGCCGTGAAAACGAT  >  NC_000913/1250891‑1251457

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.