New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2511350 =	NA (NA)	4 (0.060)	4/270	9.5	NA	noncoding (1/88 nt)	REP172 (repetitive extragenic palindromic) element, contains 2 REP sequences	REP172 (repetitive extragenic palindromic) element, contains 2 REP sequences
	?	NC_000913	2511382 =	NA (NA)					noncoding (33/88 nt)	REP172 (repetitive extragenic palindromic) element, contains 2 REP sequences	REP172 (repetitive extragenic palindromic) element, contains 2 REP sequences
Rejected: Coverage evenness skew score above cutoff.

GTTGTTGGTGGGGACGGCGCTGGGATTGTAGTTGAATGAGCGTCGCATCTGGCACTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACGCGTTAAAGAGCCGGTTTGTAGGCCTGATAAGACGCACTAGCGTCGCATCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2511496‑2511350 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaggcCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCAC  >  NC_000913/2511382‑2511522                                                                                                                                                                                                                                                                                                  GTTGTGGGTGGGGGTGGCGCTGGGGTTGTGGTTGAAGGCGCGTCGCGTCTGGCGCTATTGGCGGGTGCGGCGTAAACGCCTTATCCGCCCTACGCGTTAAAGAGCCGGTTTGTAGGCCTGATAAGACGCACTAGCGTCGCATC                                                                                                                                                   <  2:311011/143‑1   TGTTGGTGGGGACGGCGCTGGGATTGTAGTTGAATGAGCGTCGCATCTGGCACTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACGCGTTAAAGAGCCGGTTTGTAGGCCTGATAAGACGCACTAGCGTCGCATCAa                                                                                                                                                 >  1:366628/1‑142     gTGGTGGTGACGGCGCTGGTATTGTAGTTGCATTGGCTTCGCTTCGGTCACTCTCGGCGGATGCGGCGTAAACGTCTTCTCCGCCCTACGCGTTAAAGAGCCGGTTTGTAGGCCTGATAAGACGCACTAGCGTCGCATCAGGC                                                                                                                                               <  2:357424/142‑1       GGTGGGGACGGCGCTGGGATTGTAGTTGAATGAGCGTCGCATCTGGCACTATTGGCGGAAGCGGCGTAAACGCCTTATCCGCCCTACGCGTTAAAGAGCCGGTTTGTAGGCCTGATAAGACGCACTAGCCTCGCATCAGacat                                                                                                                                             >  2:19328/1‑139        GTGGGGACGGCGCTGGGATTGTAGTTGAATGAGCGTCGCATCTGGCACTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACGCGTCACAGAGCCGGTTTGTAGGCCTGCTAAGACGCACTAGCGTCGCATCAGGCCTc                                                                                                                                            >  2:675068/1‑142                                                                                                            GTTTGTAGGCCTGATAAGACGCACTAGCGTCGCATCAGGCCTACAAACCGGCTCTTTCACGCGTAGGGCGGATACGGCGTTTACGCCGCATCCGCCAATAGTGACAGATGCGACGCACATTTAACTAAAAACCCAGCCCCATC                                        >  1:356986/1‑143                                                                                                                GTAGGCCTGATAAGACGCACTAGCGTCGCATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCAGCCTCCGCCAACAGTGCCAGATGCGACGCTCACTCAACTACAATCACAGCGCCGCCCCCA                                    >  2:134382/1‑143                                                                                                                    GCCTGATAAGACGCACTAGCGTCGCATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAA                                >  1:238758/1‑143                                                                                                                                             ATCAGGCCTACAAGCCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATagatcggaagagcg       <  2:1118467/143‑15                                                                                                                                             ATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACC       <  2:104743/143‑1                                                                                                                                              TCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCA      <  2:103626/143‑1                                                                                                                                               CAGTCCTACAACCCGGTTCTTTAACGCGTGGTGCCGACAAGACGTTTACGCCGCATCCGCCAATAGTGCCAGCTGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAG     <  2:10897/143‑1                                                                                                                                                AGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGC    >  1:150661/1‑143                                                                                                                                                  GCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCGAGCGCCGTCCCCCCCAACACACAGAAAATCAGCGCCACGCCCAGCAC  >  2:1166640/1‑143                                                                                                                                                                                                                                                                                                  GTTGTTGGTGGGGACGGCGCTGGGATTGTAGTTGAATGAGCGTCGCATCTGGCACTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACGCGTTAAAGAGCCGGTTTGTAGGCCTGATAAGACGCACTAGCGTCGCATCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2511496‑2511350 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaggcCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCAGCGCCACGACCAGCAC  >  NC_000913/2511382‑2511522

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.