New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2511350 =NA (NA)4 (0.060) 4/270 9.5 NA noncoding (1/88 nt) REP172 (repetitive extragenic palindromic) element, contains 2 REP sequences REP172 (repetitive extragenic palindromic) element, contains 2 REP sequences
?NC_000913 2511382 = NA (NA)noncoding (33/88 nt) REP172 (repetitive extragenic palindromic) element, contains 2 REP sequences REP172 (repetitive extragenic palindromic) element, contains 2 REP sequences
Rejected: Coverage evenness skew score above cutoff.

TAATGGCTACCACCGTGGCTGGGATAAGCGTAAAGCGTATGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAA  >  NC_000913/2511208‑2511492
                                                                                                                                              |                                                                                                                                              
tAATGGCTACCACCGTGGCTGGGATAAGCGTAAAGCGTATGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATg                                                                                                                                                <  1:372132/143‑1 (MQ=255)
  aTGGCTACCACCGTGGCTGGGATAAGCGTAAAGCGTATGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGcc                                                                                                                                              <  1:148042/143‑1 (MQ=255)
     gcgaccaccGTGGCTGGGATAAGCGTAAAGCGTATGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAACACAATGCCTGa                                                                                                                                           <  1:492353/140‑1 (MQ=255)
       tACCACCGTGGCTGGGATAAGCGTAAAGCGTATGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATg                                                                                                                                         <  1:1037555/143‑1 (MQ=255)
           accGTGGCTGGGATAAGCGTAAAGCGTATGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGAc                                                                                                                                     <  1:530053/143‑1 (MQ=255)
           accGTGGCTGGGATAAGCGTAAAGCGTATGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGAc                                                                                                                                     >  2:651361/1‑143 (MQ=255)
               tGGCTGGGATAAGCGGACAGCGGATGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAACGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTa                                                                                                                                 <  2:641974/143‑1 (MQ=255)
                 gCTGGGATAAGCGTAAAGCGTATGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGt                                                                                                                               <  1:570606/143‑1 (MQ=255)
                     ggAGAAGCGTAAAGCGTATGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGt                                                                                                                           <  1:716303/143‑1 (MQ=255)
                      gATAAGCGTAAAGCGTATGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAACCGCGTCCGCCACTGGCGCCCACTGCCTGATGCGCCGCCAGTGCGTc                                                                                                                          >  2:1154162/1‑143 (MQ=255)
                          agcgtaaagcgtaTGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAATGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTAt                                                                                                                      <  1:337919/143‑1 (MQ=255)
                            cgtaaagcgtaTGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCCATGGCGCACCATGCCTGCTGCCCCGCTAGTTCGGCTTATCa                                                                                                                    >  1:295868/1‑143 (MQ=255)
                             gtaaagcgtaTGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAg                                                                                                                   >  1:1112437/1‑143 (MQ=255)
                               aagtcgtaTGAGCGGGGCTATGGTGAAGGCTGGCGGGTGCGTGACGATCGTGGCGGAACAGGCCGGGGTCATGGGCCCCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGc                                                                                                                 <  2:1098126/139‑1 (MQ=255)
                                 agcgtaTGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGGCAGGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATACGACGCTAGTGCGTCTTCTCACGCCt                                                                                                               >  1:860463/1‑143 (MQ=255)
                                  gcgtaTGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTa                                                                                                              <  1:120085/143‑1 (MQ=255)
                                    gtaTGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCGCCGCCATTAAACGCGTCCGCAAATGGAGCACAAAGCCAGATGCGACGCTAGTGGGTCTTATCAGGCCTACa                                                                                                            >  1:19328/1‑143 (MQ=255)
                                      aggAGCGGGGCTAGCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACaaa                                                                                                          <  1:1131967/141‑1 (MQ=255)
                                      aTGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCTTGAGACTCGTCCGCCCCCGGAGCACAATGCCTGATGCGACGCTAGTGCGGCTTATCAGGCCGACaaa                                                                                                          >  1:600834/1‑143 (MQ=255)
                                        gAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCCCCGCCATTAAACGCCTCCGCCAATGGAGCACAATGCCTGATGCGACGCTGGTGCGTCTGATCCGGCCTGAAAAcc                                                                                                        >  1:288596/1‑143 (MQ=255)
                                             tGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGctc                                                                                                   >  1:251177/1‑143 (MQ=255)
                                             tGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGctc                                                                                                   >  1:251012/1‑143 (MQ=255)
                                                cTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGGGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCttt                                                                                                >  1:103626/1‑143 (MQ=255)
                                                  aTCGTGAAGGCTGCCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGGCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTaa                                                                                              <  1:218601/143‑1 (MQ=255)
                                                     gtaaaGGCTGGCGCGATCGTGACGAACATCGCGGAAAAGGCCGGGGTCATTGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCGGATGCGACGCCAGTGCGGCTGATCAGGCCTACAAACCGGCACGCTAAcgc                                                                                           >  2:1125806/4‑143 (MQ=255)
                                                        aaGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTa                                                                                        >  1:768310/1‑143 (MQ=255)
                                                            cTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGc                                                                                    <  1:457847/143‑1 (MQ=255)
                                                              cgcgcGATCGCGACGATCATCGCCGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTGGGGCgg                                                                                  <  2:254469/142‑1 (MQ=255)
                                                                  cgctCGTGAGGATCATCGCGGAAAAGGGCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATaa                                                                              <  2:971682/140‑1 (MQ=255)
                                                                   gATGGTGACGATTATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGTGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAg                                                                             <  2:503169/143‑1 (MQ=255)
                                                                   gATCGTGACGATCATCGCGGAAAAGGCCGGGGTCAGGGGCAGCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATGAg                                                                             >  1:1058514/1‑143 (MQ=255)
                                                                   gATCGTCACGAGCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAg                                                                             <  1:31234/143‑1 (MQ=255)
                                                                    aTCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAGGGGAGCACAATGCCTGATGCGACGCTAGTGCGCCTTATCAGGCCTACAAACCGGCTCTGTAACGCGCAGGGCGGATACgg                                                                            >  2:889045/1‑143 (MQ=39)
                                                                     tCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGc                                                                           >  1:1143770/1‑143 (MQ=255)
                                                                     tCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACAGCCATTAAACGCGTCCGCCAATGGAACACAATGCCTGCTGGAATTGATCTTATTTTGATCAGGCCTACAAACAGGATCTTTAACGCGTGGGGCGGATCAGGc                                                                           >  1:541234/1‑143 (MQ=255)
                                                                        tGACGATCAGCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGtt                                                                        <  1:763666/143‑1 (MQ=255)
                                                                         gACGATGATCGCGGAAAAGGCCGGGGTCAGGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGttt                                                                       <  1:682627/143‑1 (MQ=255)
                                                                         gACGATCATCGCGGACAAGGCCGTGGTCATGGGCACCGCCATTAAACGCGGCCGCCAATGGAGCACAATGCCTGCTGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGttt                                                                       <  1:111371/143‑1 (MQ=255)
                                                                            gATCATCGCTGAAAAGGCCGGGGTCATGGGCACCGCCATGAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTAcg                                                                    <  2:206915/143‑1 (MQ=255)
                                                                              tcatcGCGGAAACGGGCGGGGTCATGGGCCCCGCCATTGATCGCTGCCGCCAATGGAGCCCAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAACCCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTAcgcc                                                                  <  2:655866/143‑1 (MQ=37)
                                                                                   gcgGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGCTTACGCCGCATc                                                             >  1:193173/1‑143 (MQ=255)
                                                                                    cgGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATcc                                                            >  2:273200/1‑143 (MQ=255)
                                                                                    cgGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGACGCGACACAAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTCGGGCGGATAAGGCGTCTAcgcaccaccc                                                            >  2:400028/1‑136 (MQ=255)
                                                                                      gagaaGGCCGGGGTCATGGTCGCCGCCATTAACCGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGCGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGc                                                          <  2:887004/140‑1 (MQ=37)
                                                                                        aaaGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCa                                                        <  1:836027/143‑1 (MQ=255)
                                                                                            gCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTCTACGCCGCATCCGCCAagag                                                    >  2:706546/1‑143 (MQ=255)
                                                                                                gggTCAGGGGCACCGGCGTTCAACGGGTCGGCCAATGGAGCACACTGCCTGATGCGACGGTAGTGCGTCTGATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGcc                                                <  2:1069180/143‑1 (MQ=37)
                                                                                                   ccATGTGCACCGCCCTTAGACGCGGCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGa                                             <  1:790822/142‑1 (MQ=255)
                                                                                                    cATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGAt                                            >  1:104743/1‑143 (MQ=255)
                                                                                                    cATGGGCACCGCCATGAAACGCCTCCGCCAATGGACCACAACGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACACACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGttctgtat                                            <  2:783072/143‑8 (MQ=37)
                                                                                                     ctGGGCACCGCCATGAAACGCGGCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATg                                           <  2:735811/142‑1 (MQ=255)
                                                                                                     aggggCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATg                                           <  2:665790/141‑1 (MQ=255)
                                                                                                             cGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGACGCGACGCTc                                   >  1:317711/1‑143 (MQ=255)
                                                                                                                   tAATCGCGTCCGCTAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCaa                             <  2:918566/143‑1 (MQ=255)
                                                                                                                   tAACCGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCaa                             <  1:637798/143‑1 (MQ=255)
                                                                                                                      aCGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTa                          <  1:651361/143‑1 (MQ=255)
                                                                                                                          gTCCGCCAGTGGGGCACATTGCCTGATGCGTCGCTAGTGCGCCTTATCAGGCCGACAGACCGGCTCTTTTACGCGTAGGGCGGATAACGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAAt                      <  2:532720/143‑1 (MQ=38)
                                                                                                                           gccGCCAATGGAGCACAATGCCTGGTGCGAAATGTGCGGGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATc                     <  2:241843/142‑1 (MQ=38)
                                                                                                                              gCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCa                  <  1:390315/143‑1 (MQ=255)
                                                                                                                               cgaaTGGAGCACATTGCCTGATGCGACGCTAGTGCGTCGTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAg                 <  2:1002732/141‑1 (MQ=255)
                                                                                                                               ccAATGGAGCACAATGCCTGATGCGACGCTATTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGGCGCTCATTCCACTACAATCCCAg                 >  2:327406/1‑143 (MQ=255)
                                                                                                                                cAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGAGCCAGATGCCACGCCCATTCAGATACAATCCCAgc                >  2:901459/1‑143 (MQ=37)
                                                                                                                                       gCACAATGCCTGATGCGACGCTAGTGCGTCTTATCACGCCTACAAACCGCCCCTTTAACCCGTAGGGCGGATAAGGCGCCTACGCCGCACCCGCCCATGGTGCCCGACGCGCCGCTCCCTCACCCACCAACCCAGCGCCGTcc         >  2:901757/1‑143 (MQ=21)
                                                                                                                                         acaATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATCAGGCGTTTGCCACGCACCCGCCCATAGTGCCGGATTCGACGCTCATTCAACTACAATCCCAGCGCCGTcccc       >  1:435762/1‑143 (MQ=38)
                                                                                                                                           gaggCCTGATGCGACGCTAGTGCGTCTTAGCAGGCCTACAAACCGGCTCTGTGACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCccac     <  2:675068/140‑1 (MQ=255)
                                                                                                                                           aaTGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCccac     >  1:537936/1‑143 (MQ=255)
                                                                                                                                           aaTGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGAGAAGGCGTTTCCGCCGCAGCCGCCAATAGTGCCGGATGCGACGCCCATTCAACTACCATCCCAGCGCCCTCCccac     >  2:364294/1‑143 (MQ=38)
                                                                                                                                            aTGTCTGATGCGAGGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCTTCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCccacc    <  2:19328/143‑1 (MQ=255)
                                                                                                                                             tGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGAACCACCGAAAAAGGGGCTCCCAATCCCCCAATGATTCCAGATTCGACGCTCATTCAACTACAATCCCAGCGCCGTCCccacca   <  1:273200/143‑1 (MQ=16)
                                                                                                                                              gCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGAGAAGACGTTTACGCCGCATCCGCCGAGAGTGACCGAAGCGAAGCCAATGCAACTACAATACCAGCGCCGTCAccaccac  >  2:357424/1‑142 (MQ=25)
                                                                                                                                              |                                                                                                                                              
TAATGGCTACCACCGTGGCTGGGATAAGCGTAAAGCGTATGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAA  >  NC_000913/2511208‑2511492

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.