New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2543915 =	52 (1.560)	5 (0.160)	5/244	3.2	10.2%	coding (709/792 nt)	ucpA	furfural resistance protein, putative short‑chain oxidoreductase
	?	NC_000913	2543976 =	39 (1.250)					coding (648/792 nt)	ucpA	furfural resistance protein, putative short‑chain oxidoreductase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AATGGCGAAAGCAATCCCGATGCGTCGCCTCGCCGATCCGCTGGAAGTCGGCGAACTGGCGGCCTTCCTCGCATCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2543991‑2543915 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcatcggGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACG  >  NC_000913/2543976‑2544087                                                                                                                                                                                               AATGGCGAAAGCAATCCCGATGCGTCGCCTCGCCGATCCGCTGGAAGTCGGCGA‑‑‑GGCG‑‑‑‑‑‑‑ACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTG                                >  6:119081/1‑149                  CGATGCGTCGCCTCGCCGATCCGCTGGAAGTCGGCGAACTGGCGGCCTTCCTCGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACG                          >  6:104767/1‑148                                GCCGATCCGCTGGAAGTCGGCGAACTGGCGGCCTTCCTCGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCAT                                       <  5:71112/121‑1                                GCCGATCCGCTGGAAGTCGGCGAACTGGCGGCCTTCCTCGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCAT                                       >  6:71112/1‑121                                         CTGGAAGTCGGCGAACTGGCGGCCTTCCTCGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACG  <  5:104767/149‑1                                                                       GCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTT                                                                  >  5:135256/1‑55                                                                       GCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTT                                                                  <  6:135256/55‑1                                                                                                                                                                                               AATGGCGAAAGCAATCCCGATGCGTCGCCTCGCCGATCCGCTGGAAGTCGGCGAACTGGCGGCCTTCCTCGCATCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2543991‑2543915 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcatcggGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACG  >  NC_000913/2543976‑2544087

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.