New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2543915 =	52 (1.560)	5 (0.160)	5/244	3.2	10.2%	coding (709/792 nt)	ucpA	furfural resistance protein, putative short‑chain oxidoreductase
	?	NC_000913	2543976 =	39 (1.250)					coding (648/792 nt)	ucpA	furfural resistance protein, putative short‑chain oxidoreductase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AATCAGATACCGACGCTAACCGTCTCCGGCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACT  >  NC_000913/2543830‑2544109                                                                                                                                                   |                                                                                                                                      aaTCAGATACCGACGCTAACCGTCTCCGGCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGAt                                                                                                                                     >  1:91768/1‑149 (MQ=255)        tACCGACGCTAACCGTCTCCGGCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTc                                                                                                                              <  7:136994/149‑1 (MQ=255)        tACCGACGCTAACCGTCTCCGGCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTc                                                                                                                              <  4:32655/149‑1 (MQ=255)          ccGACGCTAACCGTCTCCGGCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGc                                                                                                                            <  1:12064/149‑1 (MQ=255)            gACGCTAACCGTCTCCGGCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCa                                                                                                                          >  1:93447/1‑149 (MQ=255)               gCTAACCGTCTCCGGCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCAttt                                                                                                                       >  2:158125/1‑149 (MQ=255)                   aCCGTCTCCGGCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTtcagt                                                                                                                   <  2:91768/149‑1 (MQ=255)                             gCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGAc                                                                                                         >  3:137228/1‑149 (MQ=255)                                gtgtGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGActct                                                                                                      <  2:93447/149‑1 (MQ=255)                                 tgtgCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGc                                                                                                                                  >  3:90542/1‑120 (MQ=255)                                 tgtgCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGc                                                                                                                                  <  4:90542/120‑1 (MQ=255)                                      tgcCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTtcagt                                                                                                                   >  7:36497/1‑130 (MQ=255)                                      tgcCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTtcagt                                                                                                                   <  8:36497/130‑1 (MQ=255)                                        ccgccATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGGCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCCGCAGCGCCTCGGGATCTTc                                                                                              >  8:41100/1‑149 (MQ=255)                                                aatcaCATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTc                                                                                       <  2:1160/148‑1 (MQ=255)                                                  tcaCATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGAc                                                                                    >  3:13810/1‑149 (MQ=255)                                                            tgtACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCaa                                                                          <  1:158125/149‑1 (MQ=255)                                                              tACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATg                                                                        <  4:137228/149‑1 (MQ=255)                                                                      aaaTAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGc                                                                >  4:5029/1‑149 (MQ=255)                                                                            cTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTgg                                                          >  7:58327/1‑149 (MQ=255)                                                                            cTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTg                                                           <  8:35991/148‑1 (MQ=255)                                                                            cTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTg                                                           >  7:35991/1‑148 (MQ=255)                                                                               gATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGgtgt                                                       >  5:82512/1‑149 (MQ=255)                                                                                aTTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGtgtg                                                      <  4:13810/149‑1 (MQ=255)                                                                                    aTCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCa                                                  >  5:112468/1‑149 (MQ=255)                                                                                              aGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCgg                                        <  3:5029/149‑1 (MQ=255)                                                                                                       gccAGTTCGCCAACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATgg                                >  6:52284/1‑148 (MQ=255)                                                                                                         cAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGt                                                                                         <  4:40662/89‑1 (MQ=255)                                                                                                         cAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGt                                                                                         >  3:40662/1‑89 (MQ=255)                                                                                                               gCCGACTTCCAGCGGATCGGCGAGGCGCCGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAAcgc                       >  4:116628/1‑149 (MQ=255)                                                                                                               gCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCAc                                                 >  4:79031/1‑123 (MQ=255)                                                                                                               gCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCAc                                                 <  3:79031/123‑1 (MQ=255)                                                                                                                    cTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATa                  <  6:82512/149‑1 (MQ=255)                                                                                                                         aGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCTGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGa             <  3:116628/149‑1 (MQ=255)                                                                                                                         aGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGa             <  8:58327/149‑1 (MQ=255)                                                                                                                                   cgaggcgaCGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTAc   <  5:119081/149‑1 (MQ=255)                                                                                                                                    gaggcgaCGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACt  >  4:124476/1‑149 (MQ=255)                                                                                                                                          aCGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCg                                                                 <  5:139987/80‑1 (MQ=255)                                                                                                                                          aCGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCg                                                                 >  6:139987/1‑80 (MQ=255)                                                                                                                                            gCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGtt                                                                                        <  6:135256/55‑1 (MQ=255)                                                                                                                                            gCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGtt                                                                                        >  5:135256/1‑55 (MQ=255)                                                                                                                                                   |                                                                                                                                      AATCAGATACCGACGCTAACCGTCTCCGGCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACT  >  NC_000913/2543830‑2544109

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.