| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,335,035 | Δ726 bp | ymiA–yciX | ymiA, yciX | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1335035 | 1335760 | 726 | 28 [0] | [0] 28 | ymiA–yciX | ymiA,yciX |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1335034 | 0 (0.000) | 28 (0.670) | 26/258 | 0.8 | 100% | intergenic (+205/‑90) | cysB/ymiA | N‑acetylserine‑responsive cysteine regulon transcriptional activator; autorepressor/uncharacterized protein |
| ? | NC_000913 | 1335761 = | 0 (0.000) | intergenic (+303/‑70) | yciX/acnA | uncharacterized protein/aconitate hydratase 1; aconitase A | |||||
TCTGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACA > NC_000913/1335619‑1335900 | acttatttctataccgtgcacaatatttttatccctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTtgt < 2:119596‑M2/6‑1 (MQ=255) taccgtgcacaatatttttatccctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTaa < 1:173563‑M2/17‑1 (MQ=255) cgtgcacaatatttttatccctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTaa > 8:69324‑M2/129‑145 (MQ=255) cgtgcacaatatttttatccctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTaa < 7:69324‑M2/17‑1 (MQ=255) cgtgcacaatatttttatccctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATAtt < 6:176394‑M2/21‑1 (MQ=255) aatatttttatccctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactgtGTTTGTGTTATCTTTAATATTCACCCt > 7:14541‑M2/122‑148 (MQ=255) atatttttatccctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGa < 5:81701‑M2/29‑1 (MQ=255) tatttttatccctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAat > 2:60041‑M2/120‑137 (MQ=255) tatttttatccctcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAat < 1:60041‑M2/18‑1 (MQ=255) ctcatatttatagggtaaattacctgtaaagtagtgtctaattacacgcctcgcaaactacagttttcaactatatatttcagggcaaaagattgaattattcactggGTTTGTGTGATCTTTAATATTCACCCTGAAGAGAACCAggg > 7:33006‑M2/109‑149 (MQ=255) attacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCAt > 4:22871‑M2/91‑148 (MQ=255) cctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAag > 6:147581‑M2/87‑148 (MQ=255) tctaattacccgcctcgcaaactccagttttctaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCt < 1:56381‑M2/13‑1 (MQ=255) tctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATc < 3:154815‑M2/12‑1 (MQ=255) tctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATc > 4:154815‑M2/73‑84 (MQ=255) taattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACACTGAAGAGAATCAGTGCTTAGCAACCCTGTCATTAAGGAGGACCTATgtcgtc > 5:188085‑M2/71‑148 (MQ=255) ccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTAc > 8:99851‑M2/64‑149 (MQ=255) gcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAagg < 5:172270‑M2/63‑1 (MQ=255) gcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAagg > 6:172270‑M2/62‑124 (MQ=255) tcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGaa < 5:147581‑M2/91‑1 (MQ=255) aaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGgaggag < 2:18818‑M2/68‑1 (MQ=255) aaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGgaggag > 1:18818‑M2/55‑122 (MQ=255) cagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAg < 3:22871‑M2/100‑1 (MQ=255) cagttttcaaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAg < 7:99851‑M2/100‑1 (MQ=255) aaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTc < 2:142282‑M2/45‑1 (MQ=255) aaatatctatttcaggtcaaaagattgaattattcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTc > 1:142282‑M2/41‑85 (MQ=255) agtgcaaaagattgaattattcactggGTTTGGGATATCTTTAATATTCACCCTGAAGATAACCAGGGCTTCGCAACCCTGTCATTACGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGAt < 8:33006‑M2/121‑1 (MQ=255) ttcactggGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACa < 8:14541‑M2/140‑1 (MQ=255) | TCTGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACA > NC_000913/1335619‑1335900 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |