Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,335,035 Δ726 bp ymiAyciX ymiA, yciX

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1335035 1335760 726 28 [0] [0] 28 ymiA–yciX ymiA,yciX

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 13350340 (0.000)28 (0.670) 26/258 0.8 100% intergenic (+205/‑90) cysB/ymiA N‑acetylserine‑responsive cysteine regulon transcriptional activator; autorepressor/uncharacterized protein
?NC_000913 1335761 = 0 (0.000)intergenic (+303/‑70) yciX/acnA uncharacterized protein/aconitate hydratase 1; aconitase A

ACTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGGTTAGCAATGCCTTCTGGAAAT  >  NC_000913/1334893‑1335174
                                                                                                                                             |                                                                                                                                            
aCTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgt                                                                                                                                        <  2:119596‑M1/148‑7 (MQ=255)
           taCCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaa                                                                                                                             <  1:173563‑M1/148‑18 (MQ=255)
              cGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatatt                                                                                                                         <  6:176394‑M1/149‑22 (MQ=255)
              cGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaa                                                                                                                             >  8:69324‑M1/1‑128 (MQ=255)
              cGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaa                                                                                                                             <  7:69324‑M1/145‑18 (MQ=255)
                     aaTATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGTgtttgtgttatctttaatattcaccct                                                                                                                   >  7:14541‑M1/1‑121 (MQ=255)
                      atatTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctga                                                                                                                 <  5:81701‑M1/149‑30 (MQ=255)
                       tatTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaat                                                                                                                            >  2:60041‑M1/1‑119 (MQ=255)
                       tatTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaat                                                                                                                            <  1:60041‑M1/137‑19 (MQ=255)
                                  cTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACACGCCTCGCAAACTACAGTTTTCAACTATATATTTCAGGGCAAAAGATTGAATTATTCACTGGgtttgtgtgatctttaatattcaccctgaagagaaccaggg                                                                                                     >  7:33006‑M1/1‑108 (MQ=255)
                                                    aTTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcat                                                                                    >  4:22871‑M1/1‑90 (MQ=255)
                                                        ccTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaag                                                                                >  6:147581‑M1/1‑86 (MQ=255)
                                                                      tCTAATTACCCGCCTCGCAAACTCCAGTTTTCTAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatct                                                                                                                                 <  1:56381‑M1/85‑14 (MQ=255)
                                                                      tCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatc                                                                                                                                  <  3:154815‑M1/84‑13 (MQ=255)
                                                                      tCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatc                                                                                                                                  >  4:154815‑M1/1‑72 (MQ=255)
                                                                        tAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcacactgaagagaatcagtgcttagcaaccctgtcattaaggaggacctatgtcgtc                                                                >  5:188085‑M1/1‑70 (MQ=255)
                                                                               ccGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctac                                                        >  8:99851‑M1/1‑63 (MQ=255)
                                                                                 gCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaagg                                                                               <  5:172270‑M1/124‑64 (MQ=255)
                                                                                 gCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaagg                                                                               >  6:172270‑M1/1‑61 (MQ=255)
                                                                                    tCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaa                                                   <  5:147581‑M1/149‑92 (MQ=255)
                                                                                        aaaCTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggag                                                                          <  2:18818‑M1/122‑69 (MQ=255)
                                                                                        aaaCTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggag                                                                          >  1:18818‑M1/1‑54 (MQ=255)
                                                                                              cAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaag                                          <  3:22871‑M1/148‑101 (MQ=255)
                                                                                              cAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaag                                          <  7:99851‑M1/148‑101 (MQ=255)
                                                                                                      aaaTATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttc                                                                                                 <  2:142282‑M1/85‑46 (MQ=255)
                                                                                                      aaaTATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttc                                                                                                 >  1:142282‑M1/1‑40 (MQ=255)
                                                                                                                   agtgcaaaaGATTGAATTATTCACTGGgtttgggatatctttaatattcaccctgaagataaccagggcttcgcaaccctgtcattacggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagat                     <  8:33006‑M1/144‑122 (MQ=255)
                                                                                                                                      ttCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccactactaca  <  8:14541‑M1/148‑141 (MQ=255)
                                                                                                                                             |                                                                                                                                            
ACTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGGTTAGCAATGCCTTCTGGAAAT  >  NC_000913/1334893‑1335174

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: