| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3339379 | 92 (1.000) | 3 (0.030) | 3/244 | NT | 3.0% | coding (687/810 nt) | mlaF | ABC transporter maintaining OM lipid asymmetry, ATP‑binding protein |
| ? | NC_000913 | = 3339417 | 107 (1.230) | coding (649/810 nt) | mlaF | ABC transporter maintaining OM lipid asymmetry, ATP‑binding protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3339229‑3339379‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgcctggATCCTGGCGGACAAAAAAATTGTCGCTCATGGCAGTGCCCAGGCGTTGCAGGCGAATCCTGATCCGCGCGTACGTCAGTTTCTGGACGGGATAGCTGACGGGCCTGTTCCGTTCCGCTATCCTGCCGGCGATTATCACGCTGA < NC_000913/3339417‑3339275 GCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGTCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCT > 6:79834/1‑149GCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGACCGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGCTTCGCCTGCAACGCCT > 4:232218/1‑149GCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTTAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCT > 7:372088/1‑149GCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCT < 4:77019/149‑1 CCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTG > 1:198944/1‑149 CCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTG > 8:256033/1‑149 CCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTG < 6:111727/149‑1 CTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTG > 8:312384/1‑124 CTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTG < 7:312384/124‑1 TCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGATCCTGGCGGACAAAAAAATTGTCGCTCAT > 5:147699/1‑149 CCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCT > 5:279119/1‑115 CCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCT < 6:279119/115‑1 TAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGG > 5:332669/1‑112 TAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGG < 6:332669/112‑1 TGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGATCCTGGCGGACAAAAAAATTGTCGCTCATGGCAGTGCCCAGGCGTTGCA < 6:147699/149‑1 TAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGATCCTGGCGGACAAAAAAATTGTCGCTCATGGCAGTGCCCAGGCGTTGCAGGC < 1:286955/149‑1 GCCTGGATCCTGGCGGACAAAAAAATTGTCGCTCATGGCAGTGCCCAGGCGTTGCAGGCGAATCCTGATCCGCGCGTACGTCAGTTTCTGGACGGGATAGCTGACGGGCCTGTTCCGTTCCGCTATCCTGCCGGCGATTATCACGCTGA > 5:346544/1‑149 GCCTGGATCCTGGCGGACAAAAAAATTGTCGCTCATGGCAGTGCCCAGGCGTTGCAGGCGAATCCTGATCCGCGCGTACGTCAGTTTCTGGACGGGATAGCTGACGGGCCTGTTCCGTTCCGCTATCCTGCCGGCGATTATCACGCTGA > 1:289514/1‑149 GCCTGGATCCTGGCGGACAAAAAAATTGTCGCTCATGGCAGTGCCCAGGCGTTGCAGGCGAATCCTGATCCGCGCGTACGTCAGTTTCTGGACGGGA < 2:12442/97‑1 GCCTGGATCCTGGCGGACAAAAAAATTGTCGCTCATGGCAGTGCCCAGGCGTTGCAGGCGAATCCTGATCCGCGCGTACGTCAGTTTCTGGACGGGA > 1:12442/1‑97 CTGGATCCTGGCGGACAAAAAAATTGTCGCTCATGGCAGTGCCCAGGCGTTGCAGGCGAATCCTGATCCGCGCGTACGTCAGTTTCTGGACGGGATAGCTGACGGGCCTGTTCCGTTCCGCTATCCTGCCGGCGATTATCA > 2:61157/1‑141 CTGGATCCTGGCGGACAAAAAAATTGTCGCTCATGGCAGTGCCCAGGCGTTGCAGGCGAATCCTGATCCGCGCGTACGTCAGTTTCTGGACGGGATAGCTGACGGGCCTGTTCCGTTCCGCTATCCTGCCGGCGATTATCA < 1:61157/141‑1 GCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3339229‑3339379‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgcctggATCCTGGCGGACAAAAAAATTGTCGCTCATGGCAGTGCCCAGGCGTTGCAGGCGAATCCTGATCCGCGCGTACGTCAGTTTCTGGACGGGATAGCTGACGGGCCTGTTCCGTTCCGCTATCCTGCCGGCGATTATCACGCTGA < NC_000913/3339417‑3339275 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |