New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 333937992 (1.000)3 (0.030) 3/244 NT 3.0% coding (687/810 nt) mlaF ABC transporter maintaining OM lipid asymmetry, ATP‑binding protein
?NC_000913 = 3339417 107 (1.230)coding (649/810 nt) mlaF ABC transporter maintaining OM lipid asymmetry, ATP‑binding protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 123 total aligned reads displayed.

TCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCA  >  NC_000913/3339275‑3339562
                                                                                                                                              |                                                                                                                                                 
tCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATccaggc                                                                                                                                             >  5:346544‑M2/1‑143 (MQ=255)
tCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATccaggc                                                                                                                                             >  1:289514‑M2/1‑143 (MQ=255)
      tGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATccag                                                                                                                                               <  1:61157‑M2/141‑5 (MQ=255)
      tGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATccag                                                                                                                                               >  2:61157‑M2/1‑137 (MQ=255)
        aTAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATcc                                                                                                                                      <  7:299705/148‑1 (MQ=255)
        aTAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCg                                                                                                                                     >  2:10903/1‑149 (MQ=255)
        aTAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCg                                                                                                                                     >  5:405818/1‑149 (MQ=255)
        aTAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCg                                                                                                                                     <  2:198944/149‑1 (MQ=255)
           aTCGGCGGAAGGATTGGGTAACGGACCAGGCCCGTCAGCTATCGCGTCCAGTAACTGCGGTTCGCGCGGATCTGGTTTGGCATGCAAGGCCTTGGCACTGCCTTGAGCGACAATTTTTTTGTCCGCCTGGATCCAGGCGTGATCCGCa                                                                                                                                   <  2:325573/148‑1 (MQ=255)
           aTCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTTAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCaa                                                                                                                                  <  8:372088/149‑1 (MQ=255)
           aTCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGCCGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCaa                                                                                                                                  <  5:404986/149‑1 (MQ=255)
           aTCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCaa                                                                                                                                  <  8:224781/149‑1 (MQ=255)
           aTCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCa                                                                                                                                   <  3:384851/148‑1 (MQ=255)
            tCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCaa                                                                                                                                  >  7:17737/1‑148 (MQ=255)
            tCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCAGTCCAGAAACTGCCGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGTCACTGCCATGCGCGACAATTTTTTTGTCCCCCAGGATCCAGGCGTGATCCGCaa                                                                                                                                  >  1:314853/1‑148 (MQ=255)
              gCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTCCGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATa                                                                                                                                <  1:75554/148‑1 (MQ=255)
                cGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACATACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACtt                                                                                                                             <  1:371698/149‑1 (MQ=255)
                  gCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTaa                                                                                                                           <  4:223434/149‑1 (MQ=255)
                  gCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTaa                                                                                                                           <  1:3652/149‑1 (MQ=255)
                  gCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTaa                                                                                                                           <  5:145709/149‑1 (MQ=255)
                  gCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTaa                                                                                                                           <  6:340827/149‑1 (MQ=255)
                    aGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCCCTGCCATGAGCGACAATGTTTTTGGCCGCCAGGATCCAGGCGGGATCCGCACTACTTcaca                                                                                                                         >  6:314628/1‑149 (MQ=255)
                      gATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCaa                                                                                                                                  <  8:214603/138‑1 (MQ=255)
                      gATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCaa                                                                                                                                  >  7:214603/1‑138 (MQ=255)
                      gATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACt                                                                                                                       >  7:407553/1‑149 (MQ=255)
                        tAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTc                                                                                                                     >  7:49412/1‑149 (MQ=255)
                           cggaacggaaCAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCgg                                                                                                                  >  1:139886/1‑149 (MQ=255)
                                cggaccAGGCCCGTCAGCTATCCCGTCCAGAAACTGCCGTACGCGCGGATCAGGCTTCGCCTGCAACGCCGGGGCACGGCCATGAGCGCCCATTTTTTTGTCCGCCAGGATCCAGGCGGGCTCCGCAATACTTAACACGTCCGGCACAt                                                                                                             >  5:220724/1‑149 (MQ=255)
                                cggaacAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTTGGCACTGCCATGCGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACAt                                                                                                             >  5:215317/1‑149 (MQ=255)
                                     cAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTga                                                                                                        <  3:257992/149‑1 (MQ=255)
                                     cAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTga                                                                                                        <  3:236449/149‑1 (MQ=255)
                                        gCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACCGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGaa                                                                                                     <  5:79834/149‑1 (MQ=255)
                                              cAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAaccacc                                                                                               >  3:22447/1‑149 (MQ=255)
                                               aGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAaccacc                                                                                               <  3:164549/148‑1 (MQ=255)
                                                  tATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACcaca                                                                                            >  4:134503/1‑148 (MQ=255)
                                                  tATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACcaca                                                                                            >  1:203555/1‑148 (MQ=255)
                                                    tCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATccaggc                                                                                                                                             >  1:12442‑M2/1‑91 (MQ=255)
                                                    tCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACcacac                                                                                           >  7:337317/1‑147 (MQ=255)
                                                    tCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACaa                                                                                         <  2:428816/149‑1 (MQ=255)
                                                        gTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAaccac                                                                                                <  6:318712/138‑1 (MQ=255)
                                                        gTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAaccac                                                                                                >  5:318712/1‑138 (MQ=255)
                                                        gTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCa                                                                                     <  8:17737/149‑1 (MQ=255)
                                                            aGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGcc                                                                                 >  5:190/1‑149 (MQ=255)
                                                             gAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCCCCACACAAGTCACGcc                                                                                 >  2:320523/1‑148 (MQ=255)
                                                                  tGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAgcgc                                                                           >  1:238988/1‑149 (MQ=255)
                                                                      gTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTg                                                                       <  1:213589/149‑1 (MQ=255)
                                                                       tACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGTTCCGCAATACTTAACACTTCCGACACATCGTGAGAAACCACCACACaa                                                                                         <  6:318497/130‑1 (MQ=255)
                                                                       tACGCGCGGATCAGCATTCGCCTGCAACGCCTGCGCCCTGCCATGCGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGACACATCGTGAGAAACCCCCACACaa                                                                                         >  5:318497/1‑130 (MQ=255)
                                                                        aCGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTaa                                                                                                                           <  1:291530/95‑1 (MQ=255)
                                                                        aCGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTaa                                                                                                                           >  2:291530/1‑95 (MQ=255)
                                                                          gcgcgGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCa                                                                   <  3:134503/149‑1 (MQ=255)
                                                                          gcgcgGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTGTTGTCCGCCCGGATCCAGGCGTGAGCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACCCAAGTCACGCCCAGCGCCCTGtt                                                                     >  3:328691/1‑147 (MQ=255)
                                                                               gATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTACAGCt                                                                >  8:391933/1‑147 (MQ=255)
                                                                                      aTTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCa                                                       <  1:320523/149‑1 (MQ=255)
                                                                                         cGCCTGCTACGCCTGGGCACTGACATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCTCCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGc                                                     <  2:314853/148‑1 (MQ=255)
                                                                                          gCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCtt                                                   >  3:249236/1‑149 (MQ=255)
                                                                                          gCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCtt                                                   <  2:337791/149‑1 (MQ=255)
                                                                                           ccTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTc                                                  >  3:233712/1‑149 (MQ=255)
                                                                                            cTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTCTTCAGCTCAGAAATCAGCTTCa                                                 >  4:199870/1‑149 (MQ=255)
                                                                                              gCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACcaca                                                                                            >  1:207220/1‑104 (MQ=255)
                                                                                              gCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACcaca                                                                                            <  2:207220/104‑1 (MQ=255)
                                                                                              gCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCAcc                                               <  5:271698/149‑1 (MQ=255)
                                                                                               cAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCAc                                                <  1:339936/147‑1 (MQ=255)
                                                                                               cAACGCCTGGGCACTGCCATGAGATACACTTTTTTTGTCCGCCAGGATCCAGGCGTGAGCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACAACACAAGTCACGCCCAGCGCGCTGTGCAGCTCAGAACTCAGCTTCACCa                                              <  6:220724/149‑1 (MQ=255)
                                                                                               cAACGCCTGGGCACTGCCATGAGAGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCa                                              <  4:328691/149‑1 (MQ=255)
                                                                                               cAACGCCTGGGCACTGCCATGAGAGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCa                                              <  6:215317/149‑1 (MQ=255)
                                                                                                aaCGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAg                                             >  4:367818/1‑149 (MQ=255)
                                                                                                 aCGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGACCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAg                                             >  6:233497/1‑148 (MQ=255)
                                                                                                   gCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTAc                                          >  7:353239/1‑149 (MQ=255)
                                                                                                    ccTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGATAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACg                                         <  5:347339/149‑1 (MQ=255)
                                                                                                      tGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGcc                                       >  2:13220/1‑149 (MQ=255)
                                                                                                               ccATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGAt                              <  7:391933/149‑1 (MQ=255)
                                                                                                                cATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATg                             <  2:238988/149‑1 (MQ=255)
                                                                                                                cATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATg                             >  6:108836/1‑149 (MQ=255)
                                                                                                                 aTGAGCGACAATTTTTTTGTCCGCCAGGATccaggcgttgcaggcgaatcctgatccgcgcgtacgtcagtttctggacgggatagctgacgggcctgttccgttccgctatcctgccggcgattatcacgctgatcttttaccaggga                            >  5:147699‑M2/1‑30 (MQ=255)
                                                                                                                   gAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGa                          >  3:329787/1‑149 (MQ=255)
                                                                                                                    aGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGa                          <  4:22447/148‑1 (MQ=255)
                                                                                                                     gCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGc                                                                                  <  1:316184/91‑1 (MQ=255)
                                                                                                                     gCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATc                        >  3:338982/1‑149 (MQ=255)
                                                                                                                       gACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATc                        >  1:19571/1‑147 (MQ=255)
                                                                                                                       gACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATc                        <  2:19571/147‑1 (MQ=255)
                                                                                                                        aCAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCa                                                                               <  4:207577/91‑1 (MQ=255)
                                                                                                                        aCAATTTTTTTGTCCGCCAGGATCAAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACcacac                                                                                           >  8:48444/1‑79 (MQ=255)
                                                                                                                          aaTTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTg                     <  4:295844/147‑1 (MQ=255)
                                                                                                                          aaTTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGcc                   >  1:147278/1‑149 (MQ=255)
                                                                                                                             ttttttGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCcaa                >  1:358004/1‑149 (MQ=255)
                                                                                                                               ttttGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCcaac               <  2:139886/148‑1 (MQ=255)
                                                                                                                                  tGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACaaa            <  8:353239/148‑1 (MQ=255)
                                                                                                                                   gTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACaaaa           <  2:147278/148‑1 (MQ=255)
                                                                                                                                   gTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACaaaa           <  2:358004/148‑1 (MQ=255)
                                                                                                                                    tCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAgg         <  5:108836/149‑1 (MQ=255)
                                                                                                                                       gCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTtc      <  6:405818/149‑1 (MQ=255)
                                                                                                                                        ccAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTtca     <  6:190/149‑1 (MQ=255)
                                                                                                                                         cAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTtcat    <  1:10903/149‑1 (MQ=255)
                                                                                                                                         cAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTtcat    >  1:74222/1‑149 (MQ=255)
                                                                                                                                          aGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTtcat    >  6:70679/1‑148 (MQ=255)
                                                                                                                                            gATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTtcatca  >  4:312829/1‑148 (MQ=255)
                                                                                                                                            gATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTtcatca  >  5:134286/1‑148 (MQ=255)
                                                                                                                                              tCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCa                                                 <  5:3087/99‑1 (MQ=255)
                                                                                                                                              tCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCa                                                 >  6:3087/1‑99 (MQ=255)
                                                                                                                                              |                                                                                                                                                 
TCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCA  >  NC_000913/3339275‑3339562

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.