New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3618495 =	48 (1.290)	4 (0.120)	4/236	4.3	7.6%	coding (720/807 nt)	nikE	nickel ABC transporter ATPase
	?	NC_000913	3618580 =	52 (1.510)					coding (805/807 nt)	nikE	nickel ABC transporter ATPase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCGGGTAATGGTTATGGACAACGGACAAATCGTCGAAACCCAGGTGGTGGGAGAGAAATTAACCTTTTCCTCTGACGCCGGACGTGTGCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAGCTATCCGCGACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCAC  >  NC_000913/3618435‑3618721                                                                                                                                                  |                                                                                                                                              gCGGGTAATGGTTATGGACAACGGACAAATCGTCGAAACCCAGGTGGTGGGAGAGAAATTAACCTTTTCCTCTGACGCCGGACGTGTGCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAAc                                                                                                                                            <  5:75199/149‑1 (MQ=255)      tAATGGTTATGGACAACGGACAAATCGTCGAAACCCAGGTGGTGGGAGAGAAATTAACCTTTTCCTCTGACGCCGGACGTGTGCTACAAAACGCGGTATT‑CCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAAt                                                                                                                                      <  1:119730/149‑1 (MQ=255)         tGGTTATGGACAACGGACAAATCGTCGAAACCCAGGTGGTGGGAGAGAAATTAACCTTTTCCTCTGACGCCGGACGTGGGCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGc                                                                                                                                    <  6:90719/149‑1 (MQ=255)            gtATGGACAACGGACAAATCGTCGAAACCCAGGTGTTGGGAGAGAAATTAACCTTTTCCTCTGACGCCGGACTTGTGCTAAAAAAAGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCaa                                                                                                                                  <  1:139098/147‑1 (MQ=255)                   cAACGGACAAATCGTCGAAACCCAGGTGGTGGGAGAGAAATTAACCTTTTCCTCTGACGCCGGACGTGTGCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCAc                                                                                                                          <  2:150901/149‑1 (MQ=255)                      cGGACAAATCGTCGAAACCCAGGTGGTGGGAGAGAAATTAACCTTTTCCTCTGACGCCGGACGTGTGCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCAt                                                                                                                       >  8:114717/1‑149 (MQ=255)                              tcgtcgAAACCCAGGTGGTGGGAGAGAAATTAACCTTTTCCTCTGACGCCGGACGTGTGCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGt                                                                                                                             >  1:34891/1‑135 (MQ=255)                              tcgtcgAAACCCAGGTGGTGGGAGAGAAATTAACCTTTTCCTCTGACGCCGGACGTGTGCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGt                                                                                                                             <  2:34891/135‑1 (MQ=255)                                   gAAACCCAGGTGGTGGGAGAGAAATTAACCTTTTCCTCTGACGCCGGACGTGTGCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCaa                                                                                                                                        >  4:13420/1‑119 (MQ=255)                                   gAAACCCAGGTGGTGGGAGAGAAATTAACCTTTTCCTCTGACGCCGGACGTGTGCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCaa                                                                                                                                        <  3:13420/119‑1 (MQ=255)                                        ccAGGTGGTGGGAGAGAAATTAACCTTTTCCTCTGACGCCGGACATGTGCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGAtt                                                                                                      >  3:141973/1‑148 (MQ=255)                                            gtggtgGGAGAGAAATTAACCTTTTCCTCTGACGCCGGACGTGTGCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTg                                                                                                 <  7:114717/149‑1 (MQ=255)                                                    agagaAATTAACCTTTTCCTCTGACGCCGGACGTGTGCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGga                                                                                               <  7:51431/143‑1 (MQ=255)                                                    agagaAATTAACCTTTTCCTCTGACGCCGGACGTGTGCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGga                                                                                               >  8:51431/1‑143 (MQ=255)                                                        aaaTTAACCTTTTCCTCTGACGCCGGACGTGTGCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGa                                                                                      >  4:152254/1‑148 (MQ=255)                                                                 ttttCCTCTGACGCCGGACGTGTGCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAAc                                                                                                                                 <  4:55259/96‑1 (MQ=255)                                                                 ttttCCTCTGACGCCGGACGTGTGCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAAc                                                                                                                                 >  3:55259/1‑96 (MQ=255)                                                                 ttttCCTCTGACGCCGGACGTGTGCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGc                                                                            >  8:101289/1‑149 (MQ=255)                                                                          gACGCCGGACGTGTGCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCACCGAGTCCCCATCCCGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGcgtcgt                                                                   >  7:43131/1‑149 (MQ=255)                                                                           aCGCCGGACGTGTGCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGcgtcgt                                                                   <  6:52766/148‑1 (MQ=255)                                                                           aCGCCGGACGTGTGCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTg                                                                  <  7:101289/149‑1 (MQ=255)                                                                           aCGCCGGACGTGTGCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTg                                                                  >  2:185636/1‑149 (MQ=255)                                                                                       tgCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTg                                                                  <  2:48095/137‑1 (MQ=255)                                                                                       tgCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTg                                                                  >  1:48095/1‑137 (MQ=255)                                                                                       tgCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATaacaac                                                       <  3:152254/148‑1 (MQ=255)                                                                                               aaCGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACa                                                                                    <  6:66965/111‑1 (MQ=255)                                                                                               aaCGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACa                                                                                    >  5:66965/1‑111 (MQ=255)                                                                                               aaCGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGaa                                              <  4:141973/149‑1 (MQ=255)                                                                                                  gcgGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGc                                                                                                                                          <  8:152821/54‑1 (MQ=255)                                                                                                  gcgGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGc                                                                                                                                          >  7:152821/1‑54 (MQ=255)                                                                                                      tATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAAc                                                                                                                                 <  1:97486/59‑1 (MQ=255)                                                                                                      tATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAAc                                                                                                                                 >  2:97486/1‑59 (MQ=255)                                                                                                      tATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCCTCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAGCTATcc                                       >  4:90435/1‑149 (MQ=255)                                                                                                           cccGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAAc                                                                                                                                 >  1:38305/1‑54 (MQ=255)                                                                                                           cccGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAAc                                                                                                                                 <  2:38305/54‑1 (MQ=255)                                                                                                           cccGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGa                                                                              <  7:85888/105‑1 (MQ=255)                                                                                                           cccGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGa                                                                              >  8:85888/1‑105 (MQ=255)                                                                                                            ccGCATTCCCCGTGCGCACTCGAAACACAGAAAAGGTATAAAGCAAATGCAACGAGTCACCATCACGCTTGATGACTATTAACTGGAGACGCTGGACAGCCTGAGACAGCTACGTGGTTATAACAACCGTTCCTAAGCTATCCGCGACa                                 >  6:137093/1‑149 (MQ=255)                                                                                                              gCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAGCTATCCGCGACAtt                               >  8:111276/1‑149 (MQ=255)                                                                                                                aTTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGGCGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAGCTATcc                                       >  7:41800/1‑139 (MQ=255)                                                                                                                aTTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAGCTATcc                                       <  8:41800/139‑1 (MQ=255)                                                                                                                     ccGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGga                                                                                               <  6:41209/78‑1 (MQ=255)                                                                                                                     ccGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGga                                                                                               >  5:41209/1‑78 (MQ=255)                                                                                                                     ccGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAGCTATCCGCGACATTCTGCg                          >  8:3508/1‑147 (MQ=255)                                                                                                                                   accacAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAGCTATCCGCGACATTCTGCGTAGCGCCCTGgcgc            >  6:143450/1‑147 (MQ=255)                                                                                                                                   accacAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAGCTATCCGCGACATTCTGCGTAGCGCCCTGGCGCa           >  8:38063/1‑148 (MQ=255)                                                                                                                                    ccacAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAGCTATCCGCGACATTCTGCGTAGCGCCCTGgcgc            >  8:117138/1‑146 (MQ=255)                                                                                                                                     cacaGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAGCTATCCGCGACATTCTGCGTAGCGCCCTGGCGCaa          >  8:93298/1‑147 (MQ=255)                                                                                                                                      acaGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAGCTATCCGCGACATTCTGCGTAGCGCCCTGGCGCAagag       <  1:185636/149‑1 (MQ=255)                                                                                                                                       caGAAAAGGATTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAGCTATCCGCGACATTCTGCGTAGCGCCCTGGCGCAAGAgg      <  5:137093/149‑1 (MQ=255)                                                                                                                                        aGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAGCTATCCGCGACATTCt                             <  4:74971/125‑1 (MQ=255)                                                                                                                                        aGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAGCTATCCGCGACATTCt                             >  3:74971/1‑125 (MQ=255)                                                                                                                                           aaaGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAGCTATCCGCGACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCAc  <  5:143450/149‑1 (MQ=255)                                                                                                                                                 ttAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAg                                             <  2:58115/100‑1 (MQ=255)                                                                                                                                                 ttAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAg                                             >  1:58115/1‑100 (MQ=255)                                                                                                                                                  |                                                                                                                                              GCGGGTAATGGTTATGGACAACGGACAAATCGTCGAAACCCAGGTGGTGGGAGAGAAATTAACCTTTTCCTCTGACGCCGGACGTGTGCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAGCTATCCGCGACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCAC  >  NC_000913/3618435‑3618721

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.