Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 755,709 Δ75 bp coding (150‑224/348 nt) sdhD → succinate dehydrogenase, membrane subunit, binds cytochrome b556

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 755709 755783 75 40 [0] [0] 40 sdhD succinate dehydrogenase, membrane subunit, binds cytochrome b556

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 7557080 (0.000)38 (1.050) 33/238 0.2 100% coding (149/348 nt) sdhD succinate dehydrogenase, membrane subunit, binds cytochrome b556
?NC_000913 755784 = 0 (0.000)coding (225/348 nt) sdhD succinate dehydrogenase, membrane subunit, binds cytochrome b556

TAAGCAACGCCTCCGCATTAGGACGCAATGGCGTACATGATTTCATCCTCGTTCGCGCTACCGCTATCGTCCTGACGCTCTACATCATTTATATGGTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGTTTCTTCGCCTCTGCGTTCACCAAAGTGTTCACCCTGCTGGCGCTGTTTTCTATCTTGATCCATGCCTGGATCGGCATGTGGCAGGTGTTGACCGACTACGTTAAACCGCTGGCTTTGCGCCTGATGCTGCAACTGGTGATTGTCGT  >  NC_000913/755564‑755855
                                                                                                                                                |                                                                                                                                                   
tAAGCAACGCCTCCGCATTAGGACGCAATGGCGTACATGATTTCATCCTCGTTCGCGCTACCGCTATCGTCCTGACGCTCTACATCATTTATATGGTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatg                                                                                                                                                 >  4:136828‑M1/1‑145 (MQ=255)
      aCGCCTCCGCATTAGGACGCAATGGCGTACATGATTTCATCCTCGTTCGCGCTACCGCTATCGTCCTGACGCTCTACATCATTTATATGGTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcag                                                                                                                                           <  3:136828‑M1/149‑11 (MQ=255)
             cGCATTAGGACGCAATGGCGTACATGATTTCATCCTCGTTCGCGCTACCGCTATCGTCCTGACGCTCTACATCATTTATATGGTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttga                                                                                                                                    <  5:1945‑M1/149‑18 (MQ=255)
                  tAGGACGCAATGGCGTACATGATTTCATCCTCGTTCGCGCTACCGCTATCGTCCTGACGCTCTACATCATTTATATGGTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgac                                                                                                                               >  7:87447‑M1/1‑127 (MQ=255)
                          aaTGGCGTACATGATTTCATCCTCGTTCGCGCTACCGCTATCGTCCTGACGCTCTACATCATTTATATGGTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgtta                                                                                                                        >  4:84379‑M1/1‑119 (MQ=255)
                          aaTGGCGTACATGATTTCATCCTCGTTCGCGCTACCGCTATCGTCCTGACGCTCTACATCATTTATATGGTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgtta                                                                                                                        >  3:143644‑M1/1‑119 (MQ=255)
                                         ttCATCCTCGTTCGCGCTACCGCTATCGTCCTGACGCTCTACATCATTTATATGGTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgc                                                                                                         <  4:143644‑M1/148‑45 (MQ=255)
                                           cATCCTCGTTCGCGCTACCGCTATCGTCCTGACGCTCTACATCATTTATATGGTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgc                                                                                                       <  8:147614‑M1/148‑47 (MQ=255)
                                              ccTCGTTCGCGCTACCGCTATCGTCCTGACGCTCTACATCATTTATATGGTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgcctga                                                                                                   >  5:73194‑M1/1‑99 (MQ=255)
                                              ccTCGTTCGCGCTACCGCTATCGTCCTGACGCTCTACATCATTTATATGGTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgcctga                                                                                                   >  5:156952‑M1/1‑99 (MQ=255)
                                                   ttCGCGCTACCGCTATCGTCCTGACGCTCTACATCATTTATATGGTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaac                                                                                                                     >  7:68971‑M1/1‑94 (MQ=255)
                                                   ttCGCGCTACCGCTATCGTCCTGACGCTCTACATCATTTATATGGTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaac                                                                                                                     <  8:68971‑M1/126‑33 (MQ=255)
                                                       cgcTACCGCTATCGTCCTGACGCTCTACATCATTTATATGGTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgcctgatgctgcaac                                                                                          <  3:84379‑M1/149‑60 (MQ=255)
                                                            ccGCTATCGTCCTGACGCTCTACATCATTTATATGGTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgcctgatgctgcaactgg                                                                                       <  8:87447‑M1/147‑63 (MQ=255)
                                                                          aCGCTCTACATCATTTATATGGTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgcctgatgctgcaactggtgattgtcgttgcac                                                                        <  6:73194‑M1/148‑78 (MQ=255)
                                                                          aCGCTCTACATCATTTATATGGTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgcctgatgctgcaactggtgattgtcgttgcac                                                                        <  6:156952‑M1/148‑78 (MQ=255)
                                                                              tctACATCATTTATATGGTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgcctgatgctgcaactggtgattgtcgtt                                                                            >  8:120488‑M1/1‑67 (MQ=255)
                                                                              tctACATCATTTATATGGTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgcctgatgctgcaactggtgattgtcgtt                                                                            <  7:120488‑M1/140‑74 (MQ=255)
                                                                                tACATCATTTATATGGTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgcctgatgctgcaactggtgattgtcgttgcactggtggt                                                                 >  1:122275‑M1/1‑65 (MQ=255)
                                                                                  catcatTTATATGGTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgc                                                                                                       <  6:17132‑M1/109‑47 (MQ=255)
                                                                                  catcatTTATATGGTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgc                                                                                                       >  5:17132‑M1/1‑63 (MQ=255)
                                                                                              ggTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgcctgatgctgcaactggtgattgtcgttgcactggtggtttacgtgatttatg                                                   >  6:168554‑M1/1‑51 (MQ=255)
                                                                                               gTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgcctgatgctgcaactggtgattgtcgttgcactggtggtttacgtgatttatgg                                                  <  4:155484‑M1/149‑100 (MQ=255)
                                                                                               gTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgcctgatgctgcaactggtgattgtcgttgcactggtggtttacgtgatttatg                                                   >  3:155484‑M1/1‑50 (MQ=255)
                                                                                                tCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgcctgatgctgcaactggtgattgtcgttgcactggtggtttacgtgatttatgga                                                 >  1:46702‑M1/1‑49 (MQ=255)
                                                                                                tCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgcctgatgctgcaactggtgattgtcgttgcactggtggtttacgtgatttatgga                                                 >  1:195091‑M1/1‑49 (MQ=255)
                                                                                                  ggTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgcctgatgctgcaactggtgattgtcgttgcactggtggtttacgtgatttatggatt                                               >  6:120979‑M1/1‑47 (MQ=255)
                                                                                                      ttttCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctt                                                                                                            >  6:79468‑M1/1‑43 (MQ=255)
                                                                                                        ttCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgcctgatgctgcaactggtgattgtcgttgcactggtggtttacgtgatttat                                                    >  2:154407‑M1/1‑41 (MQ=255)
                                                                                                        ttCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgcctgatgctgcaactggtgattgtcgttgcactggtggtttacgtgatttat                                                    <  1:154407‑M1/138‑98 (MQ=255)
                                                                                                         tCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgcctgatgctgcaactggtgattgtcgttgcactggtggtttacgtgatttatggattcgttgt                                         <  2:122275‑M1/148‑109 (MQ=255)
                                                                                                             tACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgcctgatgctgcaactggtgattgtcgttgcactggtggtttacgtgatttatggattcgttgtggtgt                                    >  2:51495‑M1/1‑36 (MQ=255)
                                                                                                                cAGTGGCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgcctgatgctgcaactggtgattgtcgttgcactggtggtttacgtgatttatggattcgttgtggtgtggg                                 <  5:120979‑M1/149‑117 (MQ=255)
                                                                                                                     gCGAGCTGACATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgcctgatgctgcaactggtgattgtcgttgcactggtggtttacgtgatttatggattcgttgtggtgtggggtgtg                            >  1:69979‑M1/1‑28 (MQ=255)
                                                                                                                             aCATATGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgcctgatgctgcaactggtgattgtcgttgcactggtggtttacgtgatttatggattcgttgtggtgtggggtgtgtgatga                      <  1:51495‑M1/147‑128 (MQ=255)
                                                                                                                                  tGAAGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgcctgatgctgcaactggtgattgtcgttgcactggtggtttacgtgatttatggattcgttgtggtgtggggtgtgtgatgaaattgcc               <  2:69979‑M1/149‑135 (MQ=255)
                                                                                                                                    aaGTCTGGATCGGcatgtggcaggtgttgcccgcctacgttaaaccgctggctttgcgcctgatgctgcaactggtgattgtcgttgcactggtggtttacgtgatttatggattcgttgtggtgtggggtgtgtgatgaaattgccag             >  4:32609‑M1/1‑13 (MQ=255)
                                                                                                                                     aGTCTGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgcctgatgctgcaactggtgattgtcgttgcactggtggtttacgtgatttatggattcgttgtggtgtggggtgtgtgatgaaattgccagt            >  1:154095‑M1/1‑12 (MQ=255)
                                                                                                                                         tGGATCGGcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgcctgatgctgcaactggtgattgtcgttgcactggtggtttacgtgatttatggattcgttgtggtgtggggtgtgtgatgaaattgccagtca          >  1:186362‑M1/1‑8 (MQ=255)
                                                                                                                                               ggcatgtggcaggtgttgaccgactacgttaaaccgctggctttgcgcctgatgctgcaactggtgattgtcgttgcactggtggtttacgtgatttatggattcgttgtggtgtggggtgtgtgatgaaattgccagtcagagaattt  <  2:195091‑M1/149‑148 (MQ=255)
                                                                                                                                                |                                                                                                                                                   
TAAGCAACGCCTCCGCATTAGGACGCAATGGCGTACATGATTTCATCCTCGTTCGCGCTACCGCTATCGTCCTGACGCTCTACATCATTTATATGGTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGTTTCTTCGCCTCTGCGTTCACCAAAGTGTTCACCCTGCTGGCGCTGTTTTCTATCTTGATCCATGCCTGGATCGGCATGTGGCAGGTGTTGACCGACTACGTTAAACCGCTGGCTTTGCGCCTGATGCTGCAACTGGTGATTGTCGT  >  NC_000913/755564‑755855

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: