mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,037,496 | 0 | A | T | 50.0% | ‑0.1 / 15.4 | 12 | intergenic (+161/‑23) | alaT/rrlA | tRNA‑Ala/23S ribosomal RNA of rrnA operon |
| * | NC_000913 | 1,313,752 | 0 | A | . | 44.4% | 12.5 / 10.8 | 9 | intergenic (‑89/‑268) | yciC/ompW | UPF0259 family inner membrane protein/outer membrane protein W |
| * | NC_000913 | 4,296,060 | 0 | C | T | 23.9% | 80.2 / 25.3 | 46 | intergenic (+266/+376) | gltP/yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1548367 = | 31 (1.010) | 3 (0.100) | 3/270 | 3.1 | 9.9% | coding (967/3048 nt) | fdnG | formate dehydrogenase‑N, alpha subunit, nitrate‑inducible |
| ? | NC_000913 | 1548388 = | 25 (0.850) | coding (988/3048 nt) | fdnG | formate dehydrogenase‑N, alpha subunit, nitrate‑inducible | |||||