Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 75,779 Δ14 bp coding (1508‑1521/1656 nt) sgrR ← transcriptional DNA‑binding transcriptional activator of sgrS sRNA

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 75779 75792 14 21 [0] [0] 23 sgrR transcriptional DNA‑binding transcriptional activator of sgrS sRNA

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 757780 (0.000)19 (0.630) 17/232 0.9 100% coding (1522/1656 nt) sgrR transcriptional DNA‑binding transcriptional activator of sgrS sRNA
?NC_000913 75793 = 0 (0.000)coding (1507/1656 nt) sgrR transcriptional DNA‑binding transcriptional activator of sgrS sRNA

CAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGCAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTGCAATAATGGCACCATCGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGATTCATCTCGCCATTGCGCCAGCGAGCAGCGTCGGCTTGCCAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTT  >  NC_000913/75661‑75937
                                                                                                                                    |                                                                                                                                                
tggatccggtggcgcaaaccacgctgatttaaaatcgaaccagccgagggtattcatgcgcaggccgcgcatactgcgttgcccctgaatgatcagccagtggtgcaataatggcaccatcgctttgctggcACCAGTTCGCCAGATTc                                                                                                                                  <  1:109611‑M2/17‑1 (MQ=255)
               aaaccacgctgatttaaaatcgaaccagccgagggtattcatgcgcaggccgcgcatactgcgttgcccctgaatgatcagccagtggtgcaataatggcaccatcgctttgctggcACCAGTTCGCCAGATTc                                                                                                                                  >  6:151814‑M2/118‑134 (MQ=255)
               aaaccacgctgatttaaaatcgaaccagccgagggtattcatgcgcaggccgcgcatactgcgttgcccctgaatgatcagccagtggtgcaataatggcaccatcgctttgctggcACCAGTTCGCCAGATTc                                                                                                                                  <  5:151814‑M2/17‑1 (MQ=255)
                 accacgctgatttaaaatcgaaccagccgagggtattcatgcgcaggccgcgcatactgcgttgcccctgaatgatcagccagtggtgcaataatggcaccatcgctttgctggcACCAGTTCGCCAGATTCATCTCGCCATTGCGCCa                                                                                                                 <  2:120725‑M2/34‑1 (MQ=255)
                                             gagggtattcatgcgcaggccgcgcatactgcgttgcccctgaatgatcagccagtggtgcaataatggcaccatcgctttgctggcACCAGTTCGCCAGATTCATCTCGCCATTGCGCCAGCGAGCAGCGTCGGCTTGCCAGt                                                                                          >  4:110647‑M2/88‑144 (MQ=255)
                                             gagggtattcatgcgcaggccgcgcatactgcgttgcccctgaatgatcagccagtggtgcaataatggcaccatcgctttgctggcACCAGTTCGCCAGATTCATCTCGCCATTGCGCCAGCGAGCAGCGTCGGCTTGCCAGt                                                                                          <  3:110647‑M2/57‑1 (MQ=255)
                                                    agtatgcgcggcctgcgcatactgcgttgcccctgaatgatcagccagtggtgcaataatggcaccatcgctttgctggcACCAGTTCGCCAGATTCATCTCGCCATTGCGCCAGCGAGCAGCGTCGGCTTGCCAGTCAATGGGAATg                                                                               >  3:12396‑M2/81‑148 (MQ=255)
                                                               gccgcgcatactgcgttgcccctgaatgatcagccagtggtgcaataatggcaccatcgctttgctggcACCAGTTCGCCAGATTCATCTCGCCATTGCGCCAGCGAGCAGCGTCGGCTTGCCAGTCAATGGGAATGCAATGTTGTAg                                                                    >  8:119453‑M2/70‑148 (MQ=255)
                                                                    gcatactgcgttgcccctgaatgatcagccagtggtgcaataatggcaccatcgctttgctggcACCAGTTCGCCAGATTCATCTCGCCATTGCGCCAGCGAGCAGCGTCGGCTTGc                                                                                              >  5:15184‑M2/65‑117 (MQ=255)
                                                                    gcatactgcgttgcccctgaatgatcagccagtggtgcaataatggcaccatcgctttgctggcACCAGTTCGCCAGATTCATCTCGCCATTGCGCCAGCGAGCAGCGTCGGCTTGc                                                                                              <  6:15184‑M2/53‑1 (MQ=255)
                                                                          tgcgttgcccctgaatgatcagccagtggtgcaataatggcaccatcgctttgctggcACCAGTTCGCCAGATTCATCTCGCCATTGCGCCAGCGAGCAGCGTCGGCTTGCCAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTc                                                        >  3:50546‑M2/59‑149 (MQ=255)
                                                                                           atcagccagtggtgcaataatggcaccatcgctttgctggcACCAGTTCGCCAGATTCATCTCGCCATTGCGCCAGCGAGCAGCGTCGGCTTGCCAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTCGCATAAATGTGCGaaaa                                       >  3:28640‑M2/42‑149 (MQ=255)
                                                                                                ccagtggtgcaataatggcaccatcgctttgctggcACCAGTTCGCCAGATTCATCTCGCCATTGCGCCAGCGAGCAGCGTCGGCTTGCCAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTCGCATAAATGTGCGAAAACagag                                  <  4:50546‑M2/113‑1 (MQ=255)
                                                                                                  agtggtgcaataatggcaccatcgctttgctggcACCAGTTCGCCAGATTCATCTCGCCATTGCGCCAGCGAGCAGCGTCGGCTTGCCAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTCGCa                                                     >  8:21048‑M2/35‑128 (MQ=255)
                                                                                                  agtggtgcaataatggcaccatcgctttgctggcACCAGTTCGCCAGATTCATCTCGCCATTGCGCCAGCGAGCAGCGTCGGCTTGCCAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTCGCa                                                     <  7:21048‑M2/94‑1 (MQ=255)
                                                                                                      gtgcaataatggcaccatcgctttgctggcACCAGTTCGCCAGATTCATCTCGCCATTGCGCCAGCGAGCAGCGTCGGCTTGCCAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTCGCATAAATGTGCGaa                                         >  8:43501‑M2/31‑136 (MQ=255)
                                                                                                      gtgcaataatggcaccatcgctttgctggcACCAGTTCGCCAGATTCATCTCGCCATTGCGCCAGCGAGCAGCGTCGGCTTGCCAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTCGCATAAATGTGCGaa                                         <  7:43501‑M2/106‑1 (MQ=255)
                                                                                                                     catcgctttgctggcACCAGTTCGCCAGATTCATCTCGCCATTGCGCCAGCGAGCAGCGTCGGCTTGCCAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTCGCATAAATGTGCGa                                          <  6:92926‑M2/105‑1 (MQ=255)
                                                                                                                     catcgctttgctggcACCAGTTCGCCAGATTCATCTCGCCATTGCGCCAGCGAGCAGCGTCGGCTTGCCAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTCGCATAAATGTGCGa                                          >  5:92926‑M2/16‑120 (MQ=255)
                                                                                                                             tgctggcACCAGTTCGCCAGATTCATCTCGCCATTGCGCCAGCGAGCAGCGTCGGCTTGCCAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGgcgc      <  4:12396‑M2/141‑1 (MQ=255)
                                                                                                                                tggcACCAGTTCGCCAGATTCATCTCGCCATTGCGCCAGCGAGCAGCGTCGGCTTGCCAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGtt  <  7:119453‑M2/145‑1 (MQ=255)
                                                                                                                                    aCCAGTTCGCCAGATTCATCTCGCCATTGCGCCAGCGAGCAGCGTCGGCTTGCCAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAgg                   <  4:66907/128‑1 (MQ=255)
                                                                                                                                    aCCAGTTCGCCAGATTCATCTCGCCATTGCGCCAGCGAGCAGCGTCGGCTTGCCAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAgg                   >  3:66907/1‑128 (MQ=255)
                                                                                                                                    |                                                                                                                                                
CAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGCAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTGCAATAATGGCACCATCGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGATTCATCTCGCCATTGCGCCAGCGAGCAGCGTCGGCTTGCCAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTT  >  NC_000913/75661‑75937

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: