| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3895233 | 44 (0.970) | 3 (0.070) | 3/258 | 6.6 | 7.2% | intergenic (+15/+39) | chrR/adeP | chromate reductase, Class I, flavoprotein/adenine permease, high affinity; adenine:H+ symporter |
| ? | NC_000913 | = 3895244 | 37 (0.890) | intergenic (+26/+28) | chrR/adeP | chromate reductase, Class I, flavoprotein/adenine permease, high affinity; adenine:H+ symporter | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCAGACGTCCGGTACCGATTTTCATCA > NC_000913/3895091‑3895372 | gtATGGGCGGCGTGATTCAGAACAAAGGTGCTCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCa < 1:623003/142‑1 (MQ=255) tATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑g < 1:678169/143‑1 (MQ=255) aTGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTGGCCGCATTTGGTGAGTTTACTCAGCGAGTGAAGATCTCAATCAAAACCCCGCGA‑ga > 2:342955/1‑142 (MQ=255) aTGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑Gc > 1:471979/1‑143 (MQ=255) ggcgTGATTCAAAACAAAGGTGATCCGCAAACCGGAGAAGTGATGGATCAGGGGACGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATcat < 1:746806/143‑1 (MQ=255) ttCAGAACAAAGTTGATCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCAGACCGGGCAAATGACCGCACTTGGGCAGCTCATTCAGCGCATAAAGATCTAAACAACACACCCGCCA‑CCACTcatccctgcc > 2:325547/1‑136 (MQ=255) aGAACAAAGTTGATCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGGTCTACATAAACACCCCGCCA‑GCAATCATGCATGGCg‑gg > 1:305444/1‑143 (MQ=255) aGAACAAAGTTGATCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCg‑gg < 1:141363/143‑1 (MQ=255) gAACAAAGTTGATCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACAACATGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGt > 1:824884/1‑143 (MQ=255) aaCAAAGTTGATCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGtt > 1:771006/1‑143 (MQ=255) aaGTTGATCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTa < 1:497265/143‑1 (MQ=255) aGTTGATCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATGAAAAACCCGCCA‑GCAATCATGCATGGCG‑GTTTTTTaa > 1:352988/1‑143 (MQ=255) gtcgATCCGCAAAGCGGAGAAGTGATTGATCAGGGTACGATGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTAAc < 1:165895/140‑1 (MQ=255) ttGATCGGCCACCCGGAGGCGTCTTGGGTCAGGGTTGGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGTGTTTATTCAGCGAGTTTAGATGTAAATAAAAAACCCGCCATGCATGATTGC‑TGGCG‑GGttttttatt < 2:323351/143‑5 (MQ=16) tGATCGGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAGACCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTAAcgc < 2:824369/143‑1 (MQ=255) aTCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTAACgcgc < 2:28668/143‑1 (MQ=255) aaaCCGGAGGAGGGATTGATCAGGGGACGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTAACGCGCTATCGa < 2:26732/143‑1 (MQ=255) aaaCCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTAACGCGCTATCGa > 1:398179/1‑143 (MQ=255) cGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCCATCATGCATGGCG‑GGTTTATAACGCGCTATCGAtttt > 2:535674/1‑143 (MQ=255) gagaAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCGATTGACCGCATACGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAGAACCCGCCA‑GCAATCACGCACGGCG‑GGGTTTTCACACGCTGTCGacgatag > 2:242011/1‑137 (MQ=255) gTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTAACGCGCTATCGATTTTAGTGAGc > 1:716400/1‑143 (MQ=255) gattgatCAGGGTACGCTGGACCACCTGACCGGGAAATTGACCGCATTAGCTAATTACACGTGTTTTTTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTAACGCGCTATCGATTTTAGTGAGCGt < 1:380954/143‑1 (MQ=255) aGGGTACGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAg > 1:168174/1‑143 (MQ=255) cGCTGGACCACCTGACCGGGCAAGTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATc < 1:60753/143‑1 (MQ=255) gCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCt < 1:284588/143‑1 (MQ=255) gCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAACCt > 1:481091/1‑143 (MQ=255) gACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAg < 2:606964/143‑1 (MQ=255) accaccTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAgg > 1:673644/1‑143 (MQ=255) cGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAACAGCCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAAcagca < 1:126558/143‑1 (MQ=255) ggCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACagcagc > 1:244014/1‑143 (MQ=255) ggCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTAACGCGCTATCAATTCTAGTCAGCGTCGATAAAGACAATCCTCCGGCTAAACagcagc > 2:133231/1‑143 (MQ=255) cAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGTTTTAAAAGGACATTCGTGAGTAGTGAGCGTCGATAAAGACAAGCTTCAGGATAAACAGCAgcgc > 1:821215/1‑143 (MQ=255) aaTTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTAACGCGCTATCGATCTTAGTGCGCGGCGATAAAGACAAGCTTCAGCCTACACAGCCGCGCa > 2:617571/1‑143 (MQ=255) aaTTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATCCATGGCA‑GGTCTTGAACGCGCTCTCAACTTTAATGCACGTCGATACAGACAACCTCCAGGCTAAACAGCGGAGCa > 2:197942/1‑143 (MQ=255) aCCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTAACGCGCTATCGATATCCGTGAGCGTCGATAAAGACAATCTTCAGGCTCAACAGCAGCGCAACgat > 2:803405/1‑143 (MQ=255) ccGCATTCGGTGAATTTATTCACCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGTTATTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACgatg < 2:429522/143‑1 (MQ=255) cacATTTGGGGAGGTTAGTCAGCGAGTTAAGAGCTAAATAAAAACCCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACgatga < 2:70235/141‑1 (MQ=255) gaTTCGGTGAGTTTATTCAGCGAGTTATGGTCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGAtt < 2:663783/142‑1 (MQ=255) tttGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCGCGGCATTCAACG‑GCGATCGCAAATAGATAACCAACACAGAGACAATCTTCACGGTAACCAGCAGCGCAACGATGATCAc > 2:806462/1‑143 (MQ=255) tttATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATACAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACAGGCt > 1:107698/1‑143 (MQ=255) tttATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCt > 1:593857/1‑143 (MQ=255) tttATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGAAACGATGATTACGCACggggt > 1:133004/1‑141 (MQ=255) ccTAAACAAAAACCCCGCCA‑GCAATCATGCATGGCC‑GGTTTTTAACGCGCTATCGACTTTAGTGAGCGTCGACAAAGACAATCTTCAGGATAAACAGCAGCGCAACGCTGATTACGCACGGGCTTAGATCTCGCAGACGTCCg < 1:527667/142‑1 (MQ=255) aataaaAAACCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGAGCACGCAGAGGTCCGGGAc > 1:241987/1‑143 (MQ=255) cccGCCA‑GCAATCATGCATGGCG‑GGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCAGACGTCCGGTACCGATTTtca > 1:472573/1‑143 (MQ=255) gCCA‑GCAATCATGCATGGCG‑GGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCAGACGTCCGGTACCGATTTtcatca > 2:774300/1‑143 (MQ=255) | TTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAAATAAAAAACCCGCCA‑GCAATCATGCATGGCG‑GGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCAGACGTCCGGTACCGATTTTCATCA > NC_000913/3895091‑3895372 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |